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5MDK
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BU of 5mdk by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form (oxidized state - state 3)
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, FE4-S3 CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7ODH
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BU of 7odh by Molmil
Crystal structure of the O2-tolerant MBH-P242C from Ralstonia eutropha in its as-isolated state
Descriptor: CHLORIDE ION, FE4-S3 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2021-04-29
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Resonance Raman spectroscopic analysis of the iron-sulfur cluster redox chain of the Ralstonia eutropha membrane-bound [NiFe]-hydrogenase
J Raman Spectrosc, 2021
6G1Z
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BU of 6g1z by Molmil
Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its Pfr state.
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
Authors:Sauthof, L, Schmidt, A, Szczepek, M, Scheerer, P.
Deposit date:2018-03-22
Release date:2018-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
3BB0
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BU of 3bb0 by Molmil
Crystal Structure of a Trapped Phosphate-Intermediate in Vanadium Apochloroperoxidase Catalyzing a Dephosphorylation Reaction
Descriptor: PHOSPHITE ION, SULFATE ION, Vanadium chloroperoxidase
Authors:Messerschmidt, A, Macedo-Ribeiro, S.
Deposit date:2007-11-09
Release date:2008-02-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a trapped phosphate intermediate in vanadium apochloroperoxidase catalyzing a dephosphorylation reaction
Biochemistry, 47, 2008
3QDQ
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BU of 3qdq by Molmil
Complex between 4-hydroxybutyrate CoA-transferase from Clostridium aminobutyricum and CoA
Descriptor: 4-Hydroxybutyrate CoA-transferase, COENZYME A
Authors:Messerschmidt, A, Macieira, S.
Deposit date:2011-01-19
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex between 4-hydroxybutyrate CoA-transferase from Clostridium aminobutyricum and CoA.
Arch.Microbiol., 194, 2012
3AZU
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BU of 3azu by Molmil
X-RAY CRYSTAL STRUCTURE OF THE TWO SITE-SPECIFIC MUTANTS HIS35GLN AND HIS35LEU OF AZURIN FROM PSEUDOMONAS AERUGINOSA
Descriptor: AZURIN, COPPER (II) ION
Authors:Messerschmidt, A, Nar, H, Huber, R.
Deposit date:1991-01-11
Release date:1993-07-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystal structure of the two site-specific mutants His35Gln and His35Leu of azurin from Pseudomonas aeruginosa.
J.Mol.Biol., 218, 1991
3G7K
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BU of 3g7k by Molmil
Crystal Structure of Methylitaconate-delta-isomerase
Descriptor: 3-methylitaconate isomerase
Authors:Messerschmidt, A, Macieira, S, Velarde, M.
Deposit date:2009-02-10
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and putative mechanism of 3-methylitaconate-delta-isomerase from Eubacterium barkeri
J.Mol.Biol., 391, 2009
3GK7
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BU of 3gk7 by Molmil
Crystal structure of 4-hydroxybutyrate CoA-Transferase from Clostridium aminobutyricum
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-Hydroxybutyrate CoA-transferase, SPERMIDINE
Authors:Messerschmidt, A, Macieira, S, Velarde, M.
Deposit date:2009-03-10
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of 4-hydroxybutyrate CoA-transferase from Clostridium aminobutyricum
Biol.Chem., 390, 2009
2FSS
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BU of 2fss by Molmil
Candida boidinii formate dehydrogenase (FDH) K47E mutant
Descriptor: SULFATE ION, formate dehydrogenase
Authors:Schirwitz, K, Schmidt, A, Lamzin, V.S.
Deposit date:2006-01-23
Release date:2007-02-13
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-resolution structures of formate dehydrogenase from Candida boidinii.
Protein Sci., 16, 2007
2W4R
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BU of 2w4r by Molmil
Crystal structure of the regulatory domain of human LGP2
Descriptor: MERCURY (II) ION, PROBABLE ATP-DEPENDENT RNA HELICASE DHX58, SULFATE ION
Authors:Pippig, D.A, Hellmuth, J.C, Cui, S, Kirchhofer, A, Lammens, K, Lammens, A, Schmidt, A, Rothenfusser, S, Hopfner, K.P.
Deposit date:2008-12-01
Release date:2009-02-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Regulatory Domain of the Rig-I Family ATPase Lgp2 Senses Double-Stranded RNA.
Nucleic Acids Res., 37, 2009
5L6Q
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BU of 5l6q by Molmil
Refolded AL protein from cardiac amyloidosis
Descriptor: CARBONATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Annamalai, K, Liberta, F, Vielberg, M.-T, Lilie, H, Guehrs, K.-H, Schierhorn, A, Koehler, R, Schmidt, A, Haupt, C, Hegenbart, O, Schoenland, S, Groll, M, Faendrich, M.
Deposit date:2016-05-31
Release date:2017-05-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Common Fibril Structures Imply Systemically Conserved Protein Misfolding Pathways In Vivo.
Angew. Chem. Int. Ed. Engl., 56, 2017
2B97
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BU of 2b97 by Molmil
Ultra-high resolution structure of hydrophobin HFBII
Descriptor: Hydrophobin II, MANGANESE (II) ION
Authors:Hakanpaa, J, Linder, M, Popov, A, Schmidt, A, Rouvinen, J.
Deposit date:2005-10-11
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.75 Å)
Cite:Hydrophobin HFBII in detail: ultrahigh-resolution structure at 0.75 A.
Acta Crystallogr.,Sect.D, 62, 2006
5AJ0
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BU of 5aj0 by Molmil
Cryo electron microscopy of actively translating human polysomes (POST state).
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Behrmann, E, Loerke, J, Budkevich, T.V, Yamamoto, K, Schmidt, A, Penczek, P.A, Vos, M.R, Burger, J, Mielke, T, Scheerer, P, Spahn, C.M.T.
Deposit date:2015-02-19
Release date:2015-05-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Snapshots of Actively Translating Human Ribosomes
Cell(Cambridge,Mass.), 161, 2015
5D51
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BU of 5d51 by Molmil
Krypton derivatization of an O2-tolerant membrane-bound [NiFe] hydrogenase reveals a hydrophobic gas tunnel network
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, FE4-S3 CLUSTER, ...
Authors:Kalms, J, Schmidt, A, Frielingsdorf, S, van der Linden, P, von Stetten, D, Lenz, O, Carpentier, P, Scheerer, P.
Deposit date:2015-08-10
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Krypton Derivatization of an O2 -Tolerant Membrane-Bound [NiFe] Hydrogenase Reveals a Hydrophobic Tunnel Network for Gas Transport.
Angew.Chem.Int.Ed.Engl., 55, 2016
7PIU
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BU of 7piu by Molmil
Cryo-EM structure of the agonist setmelanotide bound to the active melanocortin-4 receptor (MC4R) in complex with the heterotrimeric Gs protein at 2.6 A resolution.
Descriptor: CALCIUM ION, Camelid antibody fragment - nanobody 35, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Heyder, N.A, Schmidt, A, Kleinau, G, Hilal, T, Scheerer, P.
Deposit date:2021-08-23
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Structures of active melanocortin-4 receptor-Gs-protein complexes with NDP-alpha-MSH and setmelanotide.
Cell Res., 31, 2021
7PIV
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BU of 7piv by Molmil
Active Melanocortin-4 receptor (MC4R)- Gs protein complex bound to agonist NDP-alpha-MSH at 2.86 A resolution.
Descriptor: CALCIUM ION, Camelid antibody VHH fragment - nanobody 35, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Heyder, N.A, Schmidt, A, Kleinau, G, Hilal, T, Scheerer, P.
Deposit date:2021-08-23
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structures of active melanocortin-4 receptor-Gs-protein complexes with NDP-alpha-MSH and setmelanotide.
Cell Res., 31, 2021
5FLX
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BU of 5flx by Molmil
Mammalian 40S HCV-IRES complex
Descriptor: 18S RRNA, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, ...
Authors:Yamamoto, H, Collier, M, Loerke, J, Ismer, J, Schmidt, A, Hilal, T, Sprink, T, Yamamoto, K, Mielke, T, Burger, J, Shaikh, T.R, Dabrowski, M, Hildebrand, P.W, Scheerer, P, Spahn, C.M.T.
Deposit date:2015-10-28
Release date:2015-12-23
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Molecular Architecture of the Ribosome-Bound Hepatitis C Virus Internal Ribosomal Entry Site RNA.
Embo J., 34, 2015
6GYH
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BU of 6gyh by Molmil
Crystal structure of the light-driven proton pump Coccomyxa subellipsoidea Rhodopsin CsR
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHOLESTEROL, Family A G protein-coupled receptor-like protein, ...
Authors:Szczepek, M, Schmidt, A, Scheerer, P.
Deposit date:2018-06-29
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design of a light-gated proton channel based on the crystal structure ofCoccomyxarhodopsin.
Sci.Signal., 12, 2019
5T4X
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BU of 5t4x by Molmil
CRYSTAL STRUCTURE OF PDE6D IN APO-STATE
Descriptor: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Authors:Qureshi, B.M, Schmidt, A, Scheerer, P.
Deposit date:2016-08-30
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Mechanistic insights into the role of prenyl-binding protein PrBP/ delta in membrane dissociation of phosphodiesterase 6.
Nat Commun, 9, 2018
5MDL
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BU of 5mdl by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its O2-derivatized form by a "soak-and-freeze" derivatization method
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8AUV
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BU of 8auv by Molmil
Cryo-EM structure of the plant 40S subunit
Descriptor: 18S rRNA, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Smirnova, J, Loerke, J, Kleinau, G, Schmidt, A, Buerger, J, Meyer, E.H, Mielke, T, Scheerer, P, Bock, R, Spahn, C.M.T, Zoschke, R.
Deposit date:2022-08-25
Release date:2023-06-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Nat.Plants, 9, 2023
8AZW
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BU of 8azw by Molmil
Cryo-EM structure of the plant 60S subunit
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Smirnova, J, Loerke, J, Kleinau, G, Schmidt, A, Buerger, J, Meyer, E.H, Mielke, T, Scheerer, P, Bock, R, Spahn, C.M.T, Zoschke, R.
Deposit date:2022-09-06
Release date:2023-06-07
Last modified:2023-06-28
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Nat.Plants, 9, 2023
8B2L
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BU of 8b2l by Molmil
Cryo-EM structure of the plant 80S ribosome
Descriptor: 18S rRNA, 25S rRNA, 30S ribosomal protein S15, ...
Authors:Smirnova, J, Loerke, J, Kleinau, G, Schmidt, A, Buerger, J, Meyer, E.H, Mielke, T, Scheerer, P, Bock, R, Spahn, C.M.T, Zoschke, R.
Deposit date:2022-09-14
Release date:2023-08-23
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Nat.Plants, 9, 2023
1IBJ
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BU of 1ibj by Molmil
Crystal structure of cystathionine beta-lyase from Arabidopsis thaliana
Descriptor: CARBONATE ION, CYSTATHIONINE BETA-LYASE, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Breitinger, U, Clausen, T, Messerschmidt, A.
Deposit date:2001-03-28
Release date:2001-04-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The three-dimensional structure of cystathionine beta-lyase from Arabidopsis and its substrate specificity
Plant Physiol., 126, 2001
2J6I
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BU of 2j6i by Molmil
Candida boidinii formate dehydrogenase (FDH) C-terminal mutant
Descriptor: FORMATE DEHYDROGENASE, TETRAETHYLENE GLYCOL
Authors:Schirwitz, K, Schmidt, A, Lamzin, V.S.
Deposit date:2006-09-29
Release date:2007-06-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:High-Resolution Structures of Formate Dehydrogenase from Candida Boidinii.
Protein Sci., 16, 2007

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