6KF4
| Cryo-EM structure of Thermococcus kodakarensis RNA polymerase | Descriptor: | DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ... | Authors: | Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S. | Deposit date: | 2019-07-06 | Release date: | 2020-07-01 | Last modified: | 2024-05-29 | Method: | ELECTRON MICROSCOPY (3.97 Å) | Cite: | Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase. Nat Commun, 11, 2020
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8KHO
| Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two Cobalt ions and Methionine | Descriptor: | COBALT (II) ION, METHIONINE, Methionine aminopeptidase 1D, ... | Authors: | Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S. | Deposit date: | 2023-08-22 | Release date: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D. Sci Rep, 13, 2023
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8KHN
| Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two cobalt ions | Descriptor: | COBALT (II) ION, Methionine aminopeptidase 1D, mitochondrial, ... | Authors: | Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S. | Deposit date: | 2023-08-22 | Release date: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D. Sci Rep, 13, 2023
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8KHM
| Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form | Descriptor: | GLYCEROL, Methionine aminopeptidase 1D, mitochondrial, ... | Authors: | Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S. | Deposit date: | 2023-08-22 | Release date: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.39 Å) | Cite: | Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D. Sci Rep, 13, 2023
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7FEQ
| Cryo-EM structure of apo BsClpP at pH 6.5 | Descriptor: | ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7FES
| Cryo-EM structure of apo BsClpP at pH 4.2 | Descriptor: | ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7FER
| Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2 | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2022-07-20 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7FEP
| Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5 | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2022-07-20 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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4JJT
| The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv | Descriptor: | ACETATE ION, Enoyl-CoA hydratase, GLYCEROL | Authors: | Tan, K, Holowicki, J, Endres, M, Kim, C.-Y, Kim, H, Hung, L.-W, Terwilliger, T.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI) | Deposit date: | 2013-03-08 | Release date: | 2013-03-27 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (2.496 Å) | Cite: | The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv To be Published
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6OI6
| Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q (sulfide soaked) | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, mitochondrial, ... | Authors: | Banerjee, R, Cho, U.S, Kim, H, Moon, S. | Deposit date: | 2019-04-08 | Release date: | 2020-01-15 | Method: | X-RAY DIFFRACTION (2.56 Å) | Cite: | A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation. Cell Chem Biol, 26, 2019
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6OIB
| Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ... | Authors: | Banerjee, R, Cho, U.S, Kim, H, Moon, S. | Deposit date: | 2019-04-09 | Release date: | 2020-01-15 | Method: | X-RAY DIFFRACTION (2.03 Å) | Cite: | A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation. Cell Chem Biol, 26, 2019
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6OIC
| Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q (sulfite soaked) | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, HYDROSULFURIC ACID, Sulfide:quinone oxidoreductase, ... | Authors: | Banerjee, R, Cho, U.S, Kim, H, Moon, S. | Deposit date: | 2019-04-09 | Release date: | 2020-01-15 | Method: | X-RAY DIFFRACTION (2.21 Å) | Cite: | A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation. Cell Chem Biol, 26, 2019
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4XYH
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4XYI
| Mis16 with H4 peptide | Descriptor: | Histone H4, Kinetochore protein Mis16 | Authors: | An, S, Kim, H, Cho, U.-S. | Deposit date: | 2015-02-02 | Release date: | 2016-02-03 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Mis16 Independently Recognizes Histone H4 and the CENP-ACnp1-Specific Chaperone Scm3sp. J.Mol.Biol., 427, 2015
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3P28
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5V7I
| Crystal structure of homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), in complex with glycine, PLP and folate-competitive pyrazolopyran inhibitor: 6-amino-4-isopropyl-3-methyl-4-(3-(pyrrolidin-1-yl)-5-(trifluoromethyl)phenyl)-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile | Descriptor: | (4R)-6-amino-3-methyl-4-(propan-2-yl)-4-[3-(pyrrolidin-1-yl)-5-(trifluoromethyl)phenyl]-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... | Authors: | Ducker, G.S, Ghergurovich, J.M, Mainolfi, N, Suri, V, Jeong, S, Friedman, A, Manfredi, M, Kim, H, Rabinowitz, J.D. | Deposit date: | 2017-03-20 | Release date: | 2017-10-11 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.47 Å) | Cite: | Human SHMT inhibitors reveal defective glycine import as a targetable metabolic vulnerability of diffuse large B-cell lymphoma. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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7V8V
| Crystal structure of PsEst3 S128A mutant | Descriptor: | esterase | Authors: | Son, J, Kim, H, Kim, H.W. | Deposit date: | 2021-08-23 | Release date: | 2022-08-31 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4. Iucrj, 10, 2023
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7V8U
| Crystal structure of PsEst3 wild-type | Descriptor: | Esterase, NITROBENZENE, SULFATE ION | Authors: | Son, J, Kim, H, Kim, H.W. | Deposit date: | 2021-08-23 | Release date: | 2022-08-31 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.25 Å) | Cite: | Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4. Iucrj, 10, 2023
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7V8X
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7V8W
| Crystal structure of PsEst3 S128A variant complexed with malonate | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, MALONIC ACID, ... | Authors: | Son, J, Kim, H, Kim, H.W. | Deposit date: | 2021-08-23 | Release date: | 2022-08-31 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4. Iucrj, 10, 2023
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2AD5
| Mechanisms of feedback regulation and drug resistance of CTP synthetases: structure of the E. coli CTPS/CTP complex at 2.8-Angstrom resolution. | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, CTP synthase, CYTIDINE-5'-TRIPHOSPHATE, ... | Authors: | Endrizzi, J.A, Kim, H, Anderson, P.M, Baldwin, E.P. | Deposit date: | 2005-07-19 | Release date: | 2005-11-01 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Mechanisms of Product Feedback Regulation and Drug Resistance in Cytidine Triphosphate Synthetases from the Structure of a CTP-Inhibited Complex(,). Biochemistry, 44, 2005
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3GN4
| Myosin lever arm | Descriptor: | CALCIUM ION, Calmodulin, MAGNESIUM ION, ... | Authors: | Mukherjea, M, Llinas, P, Kim, H, Travaglia, M, Safer, D, Zong, A.B, Menetrey, J, Franzini-Armstrong, C, Selvin, P.R, Houdusse, A, Sweeney, H.L. | Deposit date: | 2009-03-16 | Release date: | 2009-09-08 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Myosin VI dimerization triggers an unfolding of a three-helix bundle in order to extend its reach Mol.Cell, 35, 2009
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3KYG
| Crystal structure of VCA0042 (L135R) complexed with c-di-GMP | Descriptor: | GUANOSINE-5'-MONOPHOSPHATE, Putative uncharacterized protein VCA0042 | Authors: | Ryu, K.S, Ko, J, Kim, H, Choi, B.S. | Deposit date: | 2009-12-06 | Release date: | 2010-04-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structure of PP4397 Reveals the Molecular Basis for Different c-di-GMP Binding Modes by Pilz Domain Proteins. J.Mol.Biol., 398, 2010
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2KEF
| Solution NMR structures of human hepcidin at 325K | Descriptor: | Hepcidin | Authors: | Jordan, J.B, Poppe, L, Hainu, M, Arvedson, T, Syed, R, Li, V, Kohno, H, Kim, H, Miranda, L.P, Cheetham, J, Sasu, B.J. | Deposit date: | 2009-01-29 | Release date: | 2009-06-23 | Last modified: | 2022-03-16 | Method: | SOLUTION NMR | Cite: | Hepcidin revisited, disulfide connectivity, dynamics, and structure. J.Biol.Chem., 284, 2009
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1QCR
| CRYSTAL STRUCTURE OF BOVINE MITOCHONDRIAL CYTOCHROME BC1 COMPLEX, ALPHA CARBON ATOMS ONLY | Descriptor: | PROTOPORPHYRIN IX CONTAINING FE, UBIQUINOL CYTOCHROME C OXIDOREDUCTASE | Authors: | Xia, D, Yu, C.A, Kim, H, Xia, J.Z, Kachurin, A, Zhang, L, Yu, L, Deisenhofer, J. | Deposit date: | 1997-05-17 | Release date: | 1998-10-14 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structure of the cytochrome bc1 complex from bovine heart mitochondria. Science, 277, 1997
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