Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4NQU
DownloadVisualize
BU of 4nqu by Molmil
anti-parallel Fc-knob (T366W) homodimer
Descriptor: Ig gamma-1 chain C region, SULFATE ION
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2013-11-25
Release date:2014-03-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Antiparallel Conformation of Knob and Hole Aglycosylated Half-Antibody Homodimers Is Mediated by a CH2-CH3 Hydrophobic Interaction.
J.Mol.Biol., 426, 2014
4NQS
DownloadVisualize
BU of 4nqs by Molmil
Knob-into-hole IgG Fc
Descriptor: Ig gamma-1 chain C region, miniZ
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2013-11-25
Release date:2014-03-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Antiparallel Conformation of Knob and Hole Aglycosylated Half-Antibody Homodimers Is Mediated by a CH2-CH3 Hydrophobic Interaction.
J.Mol.Biol., 426, 2014
4NQT
DownloadVisualize
BU of 4nqt by Molmil
anti-parallel Fc-hole(T366S/L368A/Y407V) homodimer
Descriptor: Ig gamma-1 chain C region
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2013-11-25
Release date:2014-03-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Antiparallel Conformation of Knob and Hole Aglycosylated Half-Antibody Homodimers Is Mediated by a CH2-CH3 Hydrophobic Interaction.
J.Mol.Biol., 426, 2014
5Z59
DownloadVisualize
BU of 5z59 by Molmil
Crystal structure of Tk-PTP in the inactive form
Descriptor: Protein-tyrosine phosphatase
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
5I44
DownloadVisualize
BU of 5i44 by Molmil
Structure of RacA-DNA complex; P21 form
Descriptor: Chromosome-anchoring protein RacA, DNA (5'-D(*TP*GP*AP*CP*GP*CP*CP*GP*GP*CP*GP*TP*CP*A)-3')
Authors:Schumacher, M.A.
Deposit date:2016-02-11
Release date:2016-05-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.621 Å)
Cite:Molecular insights into DNA binding and anchoring by the Bacillus subtilis sporulation kinetochore-like RacA protein.
Nucleic Acids Res., 44, 2016
2ESF
DownloadVisualize
BU of 2esf by Molmil
Identification of a Novel Non-Catalytic Bicarbonate Binding Site in Eubacterial beta-Carbonic Anhydrase
Descriptor: BICARBONATE ION, Carbonic anhydrase 2, ZINC ION
Authors:Cronk, J.D, Rowlett, R.S, Zhang, K.Y.J, Tu, C, Endrizzi, J.A, Gareiss, P.C.
Deposit date:2005-10-26
Release date:2006-04-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of a Novel Noncatalytic Bicarbonate Binding Site in Eubacterial beta-Carbonic Anhydrase.
Biochemistry, 45, 2006
5I41
DownloadVisualize
BU of 5i41 by Molmil
Structure of the apo RacA DNA binding domain
Descriptor: Chromosome-anchoring protein RacA
Authors:schumacher, M.A.
Deposit date:2016-02-11
Release date:2016-05-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular insights into DNA binding and anchoring by the Bacillus subtilis sporulation kinetochore-like RacA protein.
Nucleic Acids Res., 44, 2016
2H4G
DownloadVisualize
BU of 2h4g by Molmil
Crystal structure of PTP1B with monocyclic thiophene inhibitor
Descriptor: 4-BROMO-3-(CARBOXYMETHOXY)-5-(4-HYDROXYPHENYL)THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
Authors:Xu, W, Wan, Z.-K.
Deposit date:2006-05-24
Release date:2006-08-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Monocyclic thiophenes as protein tyrosine phosphatase 1B inhibitors: Capturing interactions with Asp48.
Bioorg.Med.Chem.Lett., 16, 2006
5Z5B
DownloadVisualize
BU of 5z5b by Molmil
Crystal structure of Tk-PTP in the G95A mutant form
Descriptor: CHLORIDE ION, FORMIC ACID, Protein-tyrosine phosphatase
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
5Z5A
DownloadVisualize
BU of 5z5a by Molmil
Crystal structure of Tk-PTP in the active form
Descriptor: Protein-tyrosine phosphatase, VANADATE ION
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
1BLI
DownloadVisualize
BU of 1bli by Molmil
BACILLUS LICHENIFORMIS ALPHA-AMYLASE
Descriptor: ALPHA-AMYLASE, CALCIUM ION, SODIUM ION
Authors:Machius, M, Declerck, N, Huber, R, Wiegand, G.
Deposit date:1998-01-07
Release date:1999-03-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Activation of Bacillus licheniformis alpha-amylase through a disorder-->order transition of the substrate-binding site mediated by a calcium-sodium-calcium metal triad.
Structure, 6, 1998
2H4K
DownloadVisualize
BU of 2h4k by Molmil
Crystal structure of PTP1B with a monocyclic thiophene inhibitor
Descriptor: 4-BROMO-3-(CARBOXYMETHOXY)-5-PHENYLTHIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
Authors:Xu, W, Wan, Z.-K.
Deposit date:2006-05-24
Release date:2006-08-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Monocyclic thiophenes as protein tyrosine phosphatase 1B inhibitors: Capturing interactions with Asp48.
Bioorg.Med.Chem.Lett., 16, 2006
3SD4
DownloadVisualize
BU of 3sd4 by Molmil
Crystal structure of the first Tudor domain of human PHF20
Descriptor: PHD finger protein 20
Authors:Cui, G, Botuyan, M.V, Thompson, J.R, Mer, G.
Deposit date:2011-06-08
Release date:2011-06-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.928 Å)
Cite:PHF20 is an effector protein of p53 double lysine methylation that stabilizes and activates p53.
Nat.Struct.Mol.Biol., 19, 2012
7E5P
DownloadVisualize
BU of 7e5p by Molmil
Aptamer enhancing peroxidase activity of myoglobin
Descriptor: DNA (5'-D(*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*AP*GP*GP*G)-3')
Authors:Tsukakoshi, K, Matsugami, A, Khunathai, K, Kanazashi, M, Yamagishi, Y, Nakama, K, Oshikawa, D, Hayashi, F, Kuno, H, Ikebukuro, K.
Deposit date:2021-02-19
Release date:2021-06-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:G-quadruplex-forming aptamer enhances the peroxidase activity of myoglobin against luminol.
Nucleic Acids Res., 49, 2021
6WKT
DownloadVisualize
BU of 6wkt by Molmil
Cu(I)-bound Copper Storage Protein BsCsp3
Descriptor: Csp3
Authors:Chen, J.Z, Oken, A, Dennison, C, Lee, J, David, S.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cu(I)-bound Copper Storage Protein BsCsp3
To Be Published
2M0X
DownloadVisualize
BU of 2m0x by Molmil
Solution structure of U14Ub1, an engineered ubiquitin variant with increased affinity for USP14
Descriptor: engineered ubiquitin variant
Authors:Phillips, A.H, Fairbrother, W.J, Corn, J.E.
Deposit date:2012-11-08
Release date:2013-06-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformational dynamics control ubiquitin-deubiquitinase interactions and influence in vivo signaling.
Proc.Natl.Acad.Sci.USA, 110, 2013
3E2X
DownloadVisualize
BU of 3e2x by Molmil
H. influenzae beta-carbonic anhydrase, variant V47A
Descriptor: Carbonic anhydrase 2, SULFATE ION, ZINC ION
Authors:Rowlett, R.S, Lee, J.
Deposit date:2008-08-06
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry, 49, 2010
3E31
DownloadVisualize
BU of 3e31 by Molmil
H. influenzae beta-carbonic anhydrase, variant V47A
Descriptor: Carbonic anhydrase 2, ZINC ION
Authors:Rowlett, R.S, Lee, J.
Deposit date:2008-08-05
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry, 49, 2010
2NTD
DownloadVisualize
BU of 2ntd by Molmil
Human fibroblast growth factor-1 (140 amino acid form) with Cys117Val/Pro134Cys mutations
Descriptor: Acidic fibroblast growth factor 1, FORMIC ACID
Authors:Dubey, V.K, Blaber, M.
Deposit date:2006-11-07
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Spackling the Crack: Stabilizing Human Fibroblast Growth Factor-1 by Targeting the N and C terminus beta-Strand Interactions
J.Mol.Biol., 371, 2007
2LDM
DownloadVisualize
BU of 2ldm by Molmil
Solution structure of human PHF20 Tudor2 domain bound to a p53 segment containing a dimethyllysine analog p53K370me2
Descriptor: Uncharacterized protein
Authors:Cui, G, Botuyan, M, Mer, G.
Deposit date:2011-05-30
Release date:2012-05-30
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:PHF20 is an effector protein of p53 double lysine methylation that stabilizes and activates p53.
Nat.Struct.Mol.Biol., 19, 2012
1HAF
DownloadVisualize
BU of 1haf by Molmil
HEREGULIN-ALPHA EPIDERMAL GROWTH FACTOR-LIKE DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: HEREGULIN-ALPHA
Authors:Jacobsen, N.E, Skelton, N.J, Fairbrother, W.J.
Deposit date:1995-11-30
Release date:1996-07-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:High-resolution solution structure of the EGF-like domain of heregulin-alpha.
Biochemistry, 35, 1996
1HAE
DownloadVisualize
BU of 1hae by Molmil
HEREGULIN-ALPHA EPIDERMAL GROWTH FACTOR-LIKE DOMAIN, NMR, 20 STRUCTURES
Descriptor: HEREGULIN-ALPHA
Authors:Jacobsen, N.E, Skelton, N.J, Fairbrother, W.J.
Deposit date:1995-11-30
Release date:1996-07-11
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:High-resolution solution structure of the EGF-like domain of heregulin-alpha.
Biochemistry, 35, 1996
5KK1
DownloadVisualize
BU of 5kk1 by Molmil
Structure of pNOB8 AspA-DNA complex.
Descriptor: AspA, DNA (31-MER)
Authors:Schumacher, M.
Deposit date:2016-06-20
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:to be published
To Be Published
7JR7
DownloadVisualize
BU of 7jr7 by Molmil
Cryo-EM structure of ABCG5/G8 in complex with Fab 2E10 and 11F4
Descriptor: ATP-binding cassette sub-family G member 5, ATP-binding cassette sub-family G member 8, Fab 11F4 heavy chain, ...
Authors:Huang, C.S, Yu, X, Min, X, Wang, Z, Zhang, H.
Deposit date:2020-08-11
Release date:2021-04-07
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of ABCG5/G8 in complex with modulating antibodies
Commun Biol, 4, 2021
2HPW
DownloadVisualize
BU of 2hpw by Molmil
Green fluorescent protein from Clytia gregaria
Descriptor: Green fluorescent protein
Authors:Stepanyuk, G, Liu, Z.J, Vysotski, S.E, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-07-17
Release date:2006-09-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Green Fluorescent Protein from Clytia Gregaria at 1.55 A resolution
To be Published

227111

数据于2024-11-06公开中

PDB statisticsPDBj update infoContact PDBjnumon