Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7VAE
DownloadVisualize
BU of 7vae by Molmil
Cryo-EM structure of bovine NTCP complexed with YN69202Fab
Descriptor: Fab heavy chain from antibody IgG clone number YN69202, Fab light chain from antibody IgG clone number YN69202, Solute carrier family 10 (Sodium/bile acid cotransporter family), ...
Authors:Asami, J, Shimizu, T, Ohto, U.
Deposit date:2021-08-29
Release date:2022-05-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Structure of the bile acid transporter and HBV receptor NTCP.
Nature, 606, 2022
7WSI
DownloadVisualize
BU of 7wsi by Molmil
Cryo-EM structure of human NTCP (wild-type) complexed with YN69202Fab
Descriptor: Fab heavy chain from antibody IgG clone number YN69202, Fab light chain from antibody IgG clone number YN69202, Sodium/bile acid cotransporter
Authors:Asami, J, Shimizu, T, Ohto, U.
Deposit date:2022-01-29
Release date:2022-05-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structure of the bile acid transporter and HBV receptor NTCP.
Nature, 606, 2022
7P34
DownloadVisualize
BU of 7p34 by Molmil
Cryo-EM structure of the proton-dependent antibacterial peptide transporter SbmA-FabS11-1 in nanodiscs
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Peptide antibiotic transporter SbmA
Authors:Ghilarov, D, Beis, K.
Deposit date:2021-07-07
Release date:2021-09-15
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Molecular mechanism of SbmA, a promiscuous transporter exploited by antimicrobial peptides.
Sci Adv, 7, 2021
2WUH
DownloadVisualize
BU of 2wuh by Molmil
Crystal structure of the DDR2 discoidin domain bound to a triple- helical collagen peptide
Descriptor: COLLAGEN PEPTIDE, DISCOIDIN DOMAIN RECEPTOR 2
Authors:Carafoli, F, Bihan, D, Stathopoulos, S, Konitsiotis, A.D, Kvansakul, M, Farndale, R.W, Leitinger, B, Hohenester, E.
Deposit date:2009-10-05
Release date:2009-12-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic Insight Into Collagen Recognition by Discoidin Domain Receptor 2
Structure, 17, 2009
8HPK
DownloadVisualize
BU of 8hpk by Molmil
Crystal structure of the bacterial oxalate transporter OxlT in an oxalate-bound occluded form
Descriptor: Fab fragment Heavy chein, Fab fragment Light chain, OXALATE ION, ...
Authors:Shimamura, T, Hirai, T, Yamashita, A.
Deposit date:2022-12-12
Release date:2023-02-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota.
Nat Commun, 14, 2023
8HPJ
DownloadVisualize
BU of 8hpj by Molmil
Crystal structure of the bacterial oxalate transporter OxlT in a ligand-free outward-facing form
Descriptor: Fv fragment Heavy chain, Fv fragment Light chain, Oxalate:formate antiporter
Authors:Shimamura, T, Hirai, T, Yamashita, A.
Deposit date:2022-12-12
Release date:2023-02-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota.
Nat Commun, 14, 2023
7KYP
DownloadVisualize
BU of 7kyp by Molmil
PsaBC from Streptococcus pneumoniae in complex with Fab
Descriptor: CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE, Manganese ABC transporter, ATP-binding protein, ...
Authors:Maher, M.J, Sjohamn, J.
Deposit date:2020-12-08
Release date:2021-08-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structural basis of bacterial manganese import.
Sci Adv, 7, 2021
7KYO
DownloadVisualize
BU of 7kyo by Molmil
PsaBC from Streptococcus pneumoniae in complex with Fab
Descriptor: Fab heavy chain, Fab light chain, Manganese ABC transporter, ...
Authors:Maher, M.J, Sjohamn, J.
Deposit date:2020-12-08
Release date:2021-08-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The structural basis of bacterial manganese import.
Sci Adv, 7, 2021
5XJM
DownloadVisualize
BU of 5xjm by Molmil
Complex structure of angiotensin II type 2 receptor with Fab
Descriptor: FabH, FabL, Sar1, ...
Authors:Asada, H, Horita, S, Shimamura, T, Iwata, S.
Deposit date:2017-05-02
Release date:2018-07-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the human angiotensin II type 2 receptor bound to an angiotensin II analog
Nat. Struct. Mol. Biol., 25, 2018
5XLI
DownloadVisualize
BU of 5xli by Molmil
Structure of anti-Angiotensin II type2 receptor antibody (D5711-4A03)
Descriptor: FabH, FabL
Authors:Asada, H, Horita, S, Iwata, S, Hirata, K.
Deposit date:2017-05-10
Release date:2018-07-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Crystal structure of the human angiotensin II type 2 receptor bound to an angiotensin II analog.
Nat. Struct. Mol. Biol., 25, 2018
7P1K
DownloadVisualize
BU of 7p1k by Molmil
Cryo EM structure of bison NHA2 in nano disc structure
Descriptor: CHOLESTEROL HEMISUCCINATE, Phosphatidylinositol, mitochondrial sodium/hydrogen exchanger 9B2
Authors:Matsuoka, R, Fudim, R, Jung, S, Drew, D.
Deposit date:2021-07-01
Release date:2022-01-26
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Structure, mechanism and lipid-mediated remodeling of the mammalian Na + /H + exchanger NHA2.
Nat.Struct.Mol.Biol., 29, 2022
7P1J
DownloadVisualize
BU of 7p1j by Molmil
Cryo EM structure of bison NHA2 in detergent structure
Descriptor: mitochondrial sodium/hydrogen exchanger 9B2
Authors:Matsuoka, R, Fudim, R, Jung, S, Drew, D.
Deposit date:2021-07-01
Release date:2022-01-26
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structure, mechanism and lipid-mediated remodeling of the mammalian Na + /H + exchanger NHA2.
Nat.Struct.Mol.Biol., 29, 2022
7P1I
DownloadVisualize
BU of 7p1i by Molmil
Cryo EM structure of bison NHA2 in detergent and N-terminal extension helix
Descriptor: mitochondrial sodium/hydrogen exchanger 9B2
Authors:Matsuoka, R, Fudim, R, Jung, S, Drew, D.
Deposit date:2021-07-01
Release date:2022-01-26
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structure, mechanism and lipid-mediated remodeling of the mammalian Na + /H + exchanger NHA2.
Nat.Struct.Mol.Biol., 29, 2022
9EXA
DownloadVisualize
BU of 9exa by Molmil
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834
Descriptor: 6-[[1-[4,6-dimethyl-5-(2-methylpropyl)pyrimidin-2-yl]piperidin-4-yl]-methyl-amino]-N-(2-pyrrolidin-1-ylethyl)pyridazine-4-carboxamide, Fab-B heavy chain, Fab-B light chain, ...
Authors:Debski-Antoniak, O.J, Hurdiss, D.L.
Deposit date:2024-04-05
Release date:2025-01-22
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A coronavirus assembly inhibitor that targets the viral membrane protein.
Nature, 640, 2025
9QUW
DownloadVisualize
BU of 9quw by Molmil
Cryo-EM structure of the human NHA2-Fab complex bound to phloretin
Descriptor: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, 3-(4-HYDROXYPHENYL)-1-(2,4,6-TRIHYDROXYPHENYL)PROPAN-1-ONE, Fab heavy chain, ...
Authors:Jung, S, Drew, D.
Deposit date:2025-04-11
Release date:2025-05-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and Inhibition of the Human Na + /H + Exchanger SLC9B2.
Int J Mol Sci, 26, 2025
9QUB
DownloadVisualize
BU of 9qub by Molmil
Cryo-EM structure of the human NHA2-Fab complex
Descriptor: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, Fab-heavy chain, Fab-light chain, ...
Authors:Jung, S, Drew, D.
Deposit date:2025-04-10
Release date:2025-05-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure and Inhibition of the Human Na + /H + Exchanger SLC9B2.
Int J Mol Sci, 26, 2025
8BUU
DownloadVisualize
BU of 8buu by Molmil
ARE-ABCF VmlR2 bound to a 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2022-11-30
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Genome-encoded ABCF factors implicated in intrinsic antibiotic resistance in Gram-positive bacteria: VmlR2, Ard1 and CplR.
Nucleic Acids Res., 51, 2023
9GSL
DownloadVisualize
BU of 9gsl by Molmil
Cryo-EM structure of human SLC35B1 in inward facing conformation
Descriptor: Fv-MBP, Solute carrier family 35 member B1
Authors:Gulati, A, Ahn, D, Suades, A, Drew, D.
Deposit date:2024-09-16
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
9GRY
DownloadVisualize
BU of 9gry by Molmil
Cryo-EM structure of human SLC35B1-Q113F variant with AMP-PNP
Descriptor: Maltodextrin-binding protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, human SLC35B1-Q113F
Authors:Gulati, A, Ahn, D, Suades, A, Drew, D.
Deposit date:2024-09-13
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
9I20
DownloadVisualize
BU of 9i20 by Molmil
Cryo-EM structure of human SLC35B1 with ADP
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ADENOSINE-5'-DIPHOSPHATE, Maltodextrin-binding protein, ...
Authors:Gulati, A, Ahn, D, Suades, A, Drew, D.
Deposit date:2025-01-17
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
9GRZ
DownloadVisualize
BU of 9grz by Molmil
Cryo-EM structure of human SLC35B1 with AMP-PNP
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Solute carrier family 35 member B1
Authors:Gulati, A, Ahn, D, Suades, A, Drew, D.
Deposit date:2024-09-13
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
9GS3
DownloadVisualize
BU of 9gs3 by Molmil
Cryo-EM structure of human SLC35B1-E33A variant with ADP in inward facing conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Maltodextrin-binding protein, SLC35B1-E33A inward facing conformation
Authors:Gulati, A, Ahn, D, Suades, A, Drew, D.
Deposit date:2024-09-13
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
9GS7
DownloadVisualize
BU of 9gs7 by Molmil
Cryo-EM structure of human SLC35B1-E33A variant with AMP-PNP
Descriptor: Fv-MBP, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Solute carrier family 35 member B1
Authors:Gulati, A, Ahn, D, Suades, A, Drew, D.
Deposit date:2024-09-13
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
9GS5
DownloadVisualize
BU of 9gs5 by Molmil
Cryo-EM structure of human SLC35B1-E33A variant with ADP in outward facing conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Fv-MBP, Solute carrier family 35 member B1
Authors:Gulati, A, Ahn, D, Suades, A, Drew, D.
Deposit date:2024-09-13
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
7VGR
DownloadVisualize
BU of 7vgr by Molmil
SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab
Descriptor: Membrane protein, YN7756_1 Fab heavy chain, YN7756_1 Fab light chain
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2021-09-18
Release date:2022-08-03
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of SARS-CoV-2 membrane protein essential for virus assembly.
Nat Commun, 13, 2022

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon