Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8G47
DownloadVisualize
BU of 8g47 by Molmil
KRAS G12C complex with GDP and AMG 510 imaged on a cryo-EM imaging scaffold
Descriptor: AMG 510 (bound form), GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-08
Release date:2023-08-09
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4F
DownloadVisualize
BU of 8g4f by Molmil
KRAS G12V complex with GDP imaged on a cryo-EM imaging scaffold
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-09
Release date:2023-08-09
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
2Y29
DownloadVisualize
BU of 2y29 by Molmil
Structure of segment KLVFFA from the amyloid-beta peptide (Ab, residues 16-21), alternate polymorph III
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-14
Release date:2011-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y3L
DownloadVisualize
BU of 2y3l by Molmil
Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42), alternate polymorph 2
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J.P, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-21
Release date:2011-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y3K
DownloadVisualize
BU of 2y3k by Molmil
Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42), alternate polymorph 1
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J.P, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-21
Release date:2011-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y3J
DownloadVisualize
BU of 2y3j by Molmil
Structure of segment AIIGLM from the amyloid-beta peptide (Ab, residues 30-35)
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J.P, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-21
Release date:2011-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y2A
DownloadVisualize
BU of 2y2a by Molmil
Structure of segment KLVFFA from the amyloid-beta peptide (Ab, residues 16-21), alternate polymorph I
Descriptor: ACETATE ION, AMYLOID BETA A4 PROTEIN
Authors:Colletier, J, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-14
Release date:2011-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
6AXZ
DownloadVisualize
BU of 6axz by Molmil
Segment from bank vole prion protein 168-176 QYNNQNNFV
Descriptor: Major prion protein
Authors:Glynn, C, Rodriguez, J.A, Boyer, D.R, Gallagher-Jones, M.
Deposit date:2017-09-07
Release date:2018-01-17
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (0.75 Å)
Cite:Sub-angstrom cryo-EM structure of a prion protofibril reveals a polar clasp.
Nat. Struct. Mol. Biol., 25, 2018
6OIZ
DownloadVisualize
BU of 6oiz by Molmil
Amyloid-Beta (20-34) wild type
Descriptor: Amyloid beta A4 protein
Authors:Sawaya, M.R, Warmack, R.A, Zee, C.T, Gonen, T, Clarke, S.G, Eisenberg, D.S.
Deposit date:2019-04-10
Release date:2019-08-07
Last modified:2024-05-15
Method:ELECTRON CRYSTALLOGRAPHY (1.1 Å)
Cite:Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
6TZN
DownloadVisualize
BU of 6tzn by Molmil
Structure of S. pombe telomerase accessory protein Pof8 C-terminal domain
Descriptor: NITRATE ION, Protein pof8
Authors:Basu, R.S, Cascio, D, Eichhorn, C.D, Feigon, J.
Deposit date:2019-08-12
Release date:2020-08-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of S. pombe telomerase protein Pof8 C-terminal domain is an xRRM conserved among LARP7 proteins.
Rna Biol., 18, 2021
1MZ4
DownloadVisualize
BU of 1mz4 by Molmil
Crystal Structure of Cytochrome c550 from Thermosynechococcus elongatus
Descriptor: BICARBONATE ION, GLYCEROL, HEME C, ...
Authors:Kerfeld, C.A, Sawaya, M.R, Bottin, H, Tran, K.T, Sugiura, M, Kirilovsky, D, Krogmann, D, Yeates, T.O, Boussac, A.
Deposit date:2002-10-05
Release date:2003-09-23
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and EPR characterization of the soluble form of cytochrome c-550 and of the psbV2 gene product from the cyanobacterium Thermosynechococcus elongatus.
Plant Cell.Physiol., 44, 2003
5TY4
DownloadVisualize
BU of 5ty4 by Molmil
MicroED structure of a complex between monomeric TGF-b and its receptor, TbRII, at 2.9 A resolution
Descriptor: TGF-beta receptor type-2, mmTGF-b2-7m
Authors:Weiss, S.C, de la Cruz, M.J, Hattne, J, Shi, D, Reyes, F.E, Callero, G, Gonen, T.
Deposit date:2016-11-18
Release date:2017-04-26
Last modified:2023-10-04
Method:ELECTRON CRYSTALLOGRAPHY (2.9 Å)
Cite:Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017
2GLS
DownloadVisualize
BU of 2gls by Molmil
REFINED ATOMIC MODEL OF GLUTAMINE SYNTHETASE AT 3.5 ANGSTROMS RESOLUTION
Descriptor: GLUTAMINE SYNTHETASE, MANGANESE (II) ION
Authors:Eisenberg, D, Almassy, R.J, Yamashita, M.M.
Deposit date:1989-05-19
Release date:1989-10-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Refined atomic model of glutamine synthetase at 3.5 A resolution.
J.Biol.Chem., 264, 1989
2G38
DownloadVisualize
BU of 2g38 by Molmil
A PE/PPE Protein Complex from Mycobacterium tuberculosis
Descriptor: MANGANESE (II) ION, PE FAMILY PROTEIN, PPE FAMILY PROTEIN
Authors:Strong, M, Sawaya, M.R, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2006-02-17
Release date:2006-03-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.Usa, 103, 2006
8DU2
DownloadVisualize
BU of 8du2 by Molmil
HnRNPA2 D290V LCD PM1
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Eisenberg, D.S, Lu, J, Ge, P, Boyer, D.R.
Deposit date:2022-07-26
Release date:2023-08-02
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation.
J.Biol.Chem., 300, 2023
8DUW
DownloadVisualize
BU of 8duw by Molmil
HnRNPA2 D290V LCD PM2
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Eisenberg, D.S, Lu, J, Ge, P, Boyer, D.R.
Deposit date:2022-07-27
Release date:2023-08-02
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation.
J.Biol.Chem., 300, 2023
8EC7
DownloadVisualize
BU of 8ec7 by Molmil
HnRNPA2 D290V LCD PM3
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Eisenberg, D.S, Lu, J, Ge, P, Boyer, D.R.
Deposit date:2022-09-01
Release date:2023-09-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation.
J.Biol.Chem., 300, 2023
6ODG
DownloadVisualize
BU of 6odg by Molmil
SVQIVY, Crystal Structure of a tau protein fragment
Descriptor: Microtubule-associated protein tau
Authors:Eisenberg, D.S, Boyer, D.R, Sawaya, M.R, Seidler, P.M.
Deposit date:2019-03-26
Release date:2019-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure-based inhibitors halt prion-like seeding by Alzheimer's disease-and tauopathy-derived brain tissue samples.
J.Biol.Chem., 294, 2019
1MQ7
DownloadVisualize
BU of 1mq7 by Molmil
CRYSTAL STRUCTURE OF DUTPASE FROM MYCOBACTERIUM TUBERCULOSIS (RV2697C)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
Authors:Sawaya, M.R, Chan, S, Segelke, B.W, Lekin, T, Heike, K, Cho, U.S, Naranjo, C, Perry, L.J, Yeates, T.O, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2002-09-13
Release date:2002-10-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
6WX1
DownloadVisualize
BU of 6wx1 by Molmil
Antigen Binding Fragment of OKT9
Descriptor: GLYCEROL, OKT9 Fab Heavy Chain, OKT9 Fab Light Chain
Authors:Rodriguez, J.A, Helguera, G, Sawaya, M, Cascio, D, Collazo, M, Flores, M, Zink, S, Ferrero, S, Payes, C, Fuentes, D, Short, C.
Deposit date:2020-05-09
Release date:2021-05-26
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Antibody-Based Inhibition of Pathogenic New World Hemorrhagic Fever Mammarenaviruses by Steric Occlusion of the Human Transferrin Receptor 1 Apical Domain.
J.Virol., 95, 2021
7SP1
DownloadVisualize
BU of 7sp1 by Molmil
RNA-induced tau amyloid fibril
Descriptor: Isoform Tau-F of Microtubule-associated protein tau, RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')
Authors:Abskharon, R, Sawaya, M.R, Boyer, D.R, Eisenberg, D.S.
Deposit date:2021-11-02
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of RNA-induced tau fibrils reveals a small C-terminal core that may nucleate fibril formation.
Proc.Natl.Acad.Sci.USA, 119, 2022
2PLT
DownloadVisualize
BU of 2plt by Molmil
STRUCTURE DETERMINATION OF PLASTOCYANIN FROM A CRYSTAL SPECIMEN WITH HEMIHEDRAL TWINNING FRACTION OF ONE-HALF
Descriptor: CALCIUM ION, COPPER (II) ION, PLASTOCYANIN
Authors:Redinbo, M.R, Merchant, S, Yeates, T.O.
Deposit date:1993-05-06
Release date:1993-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The 1.5-A crystal structure of plastocyanin from the green alga Chlamydomonas reinhardtii.
Biochemistry, 32, 1993
5KBA
DownloadVisualize
BU of 5kba by Molmil
Computational Design of Self-Assembling Cyclic Protein Homooligomers
Descriptor: Designed protein ANK1C2
Authors:Sankaran, B, Zwart, P.H, Fallas, J.A, Pereira, J.H, Ueda, G, Baker, D.
Deposit date:2016-06-02
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017
5KWD
DownloadVisualize
BU of 5kwd by Molmil
Computationally Designed Symmetric Homotetramer
Descriptor: Ankyrin repeat-containing protein
Authors:Fallas, J.A, Sankaran, B, Zwart, P, Baker, D.
Deposit date:2016-07-17
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017
3FPO
DownloadVisualize
BU of 3fpo by Molmil
HSSNNF segment from Islet Amyloid Polypeptide (IAPP or Amylin)
Descriptor: HSSNNF hexapeptide segment from Islet Amyloid Polypeptide
Authors:Wiltzius, J.J.W, Sawaya, M.R, Eisenberg, D.
Deposit date:2009-01-05
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular mechanisms for protein-encoded inheritance.
Nat.Struct.Mol.Biol., 16, 2009

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon