Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7LWY
DownloadVisualize
BU of 7lwy by Molmil
TVV viral capsid protein
Descriptor: Capsid protein
Authors:Zhou, Z.H, Stevens, A.W, Cui, Y.X, Johnson, P.J, Muratore, K.A.
Deposit date:2021-03-02
Release date:2021-04-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Atomic Structure of the Trichomonas vaginalis Double-Stranded RNA Virus 2.
Mbio, 12, 2021
7ELL
DownloadVisualize
BU of 7ell by Molmil
In situ structure of capping enzyme lambda2, penetration protein mu1 of mammalian reovirus capsid asymmetric unit.
Descriptor: MYRISTIC ACID, Mu1, mRNA (guanine-N(7)-)-methyltransferase
Authors:Zhou, Z.H, Pan, M.
Deposit date:2021-04-12
Release date:2021-10-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu2 and capsid proteins.
Nat Commun, 12, 2021
7ELH
DownloadVisualize
BU of 7elh by Molmil
In situ structure of transcriptional enzyme complex and capsid shell protein of mammalian reovirus at initiation state
Descriptor: Lambda 1, Minor core protein mu2, PHOSPHATE ION, ...
Authors:Zhou, Z.H, Pan, M.
Deposit date:2021-04-11
Release date:2021-10-20
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu2 and capsid proteins.
Nat Commun, 12, 2021
3CNF
DownloadVisualize
BU of 3cnf by Molmil
3.88 Angstrom structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy
Descriptor: VP1, VP3
Authors:Yu, X, Jin, L, Zhou, Z.H.
Deposit date:2008-03-25
Release date:2008-04-29
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:3.88 A structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy.
Nature, 453, 2008
1ZRP
DownloadVisualize
BU of 1zrp by Molmil
SOLUTION-STATE STRUCTURE BY NMR OF ZINC-SUBSTITUTED RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: RUBREDOXIN, ZINC ION
Authors:Blake, P.R, Park, J.B, Zhou, Z.H, Hare, D.R, Adams, M.W.W, Summers, M.F.
Deposit date:1992-07-10
Release date:1993-10-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution-state structure by NMR of zinc-substituted rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
7SLQ
DownloadVisualize
BU of 7slq by Molmil
Cryo-EM structure of 7SK core RNP with circular RNA
Descriptor: 7SK snRNA methylphosphate capping enzyme, La-related protein 7, Minimal circular 7SK RNA, ...
Authors:Yang, Y, Liu, S, Zhou, Z.H, Feigon, J.
Deposit date:2021-10-24
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of RNA conformational switching in the transcriptional regulator 7SK RNP.
Mol.Cell, 82, 2022
7SLP
DownloadVisualize
BU of 7slp by Molmil
Cryo-EM structure of 7SK core RNP with linear RNA
Descriptor: 7SK snRNA methylphosphate capping enzyme, La-related protein 7, Linear 7SK RNA, ...
Authors:Yang, Y, Liu, S, Zhou, Z.H, Feigon, J.
Deposit date:2021-10-24
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of RNA conformational switching in the transcriptional regulator 7SK RNP.
Mol.Cell, 82, 2022
6E10
DownloadVisualize
BU of 6e10 by Molmil
PTEX Core Complex in the Engaged (Extended) State
Descriptor: Endogenous cargo polypeptide, Exported protein 2, Heat shock protein 101, ...
Authors:Ho, C, Lai, M, Zhou, Z.H.
Deposit date:2018-07-08
Release date:2018-08-22
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Malaria parasite translocon structure and mechanism of effector export.
Nature, 561, 2018
6E11
DownloadVisualize
BU of 6e11 by Molmil
PTEX Core Complex in the Resetting (Compact) State
Descriptor: Endogenous cargo polypeptide, Exported protein 2, Heat shock protein 101, ...
Authors:Ho, C, Lai, M, Zhou, Z.H.
Deposit date:2018-07-08
Release date:2018-08-22
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (4.23 Å)
Cite:Malaria parasite translocon structure and mechanism of effector export.
Nature, 561, 2018
3B8K
DownloadVisualize
BU of 3b8k by Molmil
Structure of the Truncated Human Dihydrolipoyl Acetyltransferase (E2)
Descriptor: Dihydrolipoyllysine-residue acetyltransferase
Authors:Yu, X, Hiromasa, Y, Tsen, H, Stoops, J.K, Roche, T.E, Zhou, Z.H.
Deposit date:2007-11-01
Release date:2008-01-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:Structures of the human pyruvate dehydrogenase complex cores: a highly conserved catalytic center with flexible N-terminal domains
Structure, 16, 2008
6M5S
DownloadVisualize
BU of 6m5s by Molmil
The coordinates of the apo hexameric terminase complex
Descriptor: Tripartite terminase subunit 1, Tripartite terminase subunit 2, Tripartite terminase subunit 3, ...
Authors:Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X.
Deposit date:2020-03-11
Release date:2020-10-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation.
Protein Cell, 11, 2020
6M5T
DownloadVisualize
BU of 6m5t by Molmil
The coordinate of the nuclease domain of the apo terminase complex
Descriptor: Tripartite terminase subunit 3
Authors:Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X.
Deposit date:2020-03-11
Release date:2020-10-28
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation.
Protein Cell, 11, 2020
2WYY
DownloadVisualize
BU of 2wyy by Molmil
CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS
Descriptor: NUCLEOPROTEIN, POLY-URIDINE
Authors:Ge, P, Tsao, J, Green, T.J, Luo, M, Zhou, Z.H.
Deposit date:2009-11-20
Release date:2010-02-16
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Cryo-Em Model of the Bullet-Shaped Vesicular Stomatitis Virus.
Science, 327, 2010
6TY9
DownloadVisualize
BU of 6ty9 by Molmil
In situ structure of BmCPV RNA dependent RNA polymerase at initiation state
Descriptor: MAGNESIUM ION, Non-template RNA (5'-D(*(GTA))-R(P*GP*UP*AP*AP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA-dependent RNA Polymerase, ...
Authors:Cui, Y.X, Zhang, Y.N, Sun, J.C, Zhou, Z.H.
Deposit date:2019-08-08
Release date:2019-11-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TZ1
DownloadVisualize
BU of 6tz1 by Molmil
In situ structure of BmCPV RNA-dependent RNA polymerase at early-elongation state
Descriptor: Non-template RNA (5'-D(*(GTA))-R(P*GP*UP*A)-3'), RNA-dependent RNA Polymerase, Template RNA (5'-R(P*AP*GP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
Authors:Cui, Y.X, Zhang, Y.N, Sun, J.C, Zhou, Z.H.
Deposit date:2019-08-09
Release date:2019-11-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TY8
DownloadVisualize
BU of 6ty8 by Molmil
In situ structure of BmCPV RNA dependent RNA polymerase at quiescent state
Descriptor: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA-dependent RNA Polymerase, Viral structural protein 4
Authors:Cui, Y.X, Zhang, Y.N, Sun, J.C, Zhou, Z.H.
Deposit date:2019-08-08
Release date:2019-11-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TZ2
DownloadVisualize
BU of 6tz2 by Molmil
In situ structure of BmCPV RNA-dependent RNA polymerase at elongation state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Non-template RNA (36-MER), ...
Authors:Cui, Y.X, Zhang, Y.N, Sun, J.C, Zhou, Z.H.
Deposit date:2019-08-09
Release date:2019-11-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TZ0
DownloadVisualize
BU of 6tz0 by Molmil
In situ structure of BmCPV RNA-dependent RNA polymerase at abortive state
Descriptor: RNA-dependent RNA Polymerase, Viral structural protein 4
Authors:Cui, Y.X, Zhang, Y.N, Sun, J.C, Zhou, Z.H.
Deposit date:2019-08-09
Release date:2019-11-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
5TC1
DownloadVisualize
BU of 5tc1 by Molmil
In situ structures of the genome and genome-delivery apparatus in ssRNA bacteriophage MS2
Descriptor: Capsid protein, Maturation protein, phage MS2 genome
Authors:Dai, X.H, Li, Z.H, Lai, M, Shu, S, Du, Y.S, Zhou, Z.H, Sun, R.
Deposit date:2016-09-13
Release date:2016-12-07
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus.
Nature, 541, 2017
6M5U
DownloadVisualize
BU of 6m5u by Molmil
The coordinates of the monomeric terminase complex in the presence of the ADP-BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Yang, Y.X, Yang, P, Wang, N, Zhu, L, Zhou, Z.H, Rao, Z.H, Wang, X.X.
Deposit date:2020-03-11
Release date:2020-10-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation.
Protein Cell, 11, 2020
1CAA
DownloadVisualize
BU of 1caa by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
1CAD
DownloadVisualize
BU of 1cad by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
6U5B
DownloadVisualize
BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
Descriptor: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U9E
DownloadVisualize
BU of 6u9e by Molmil
Structure of PdpA-VgrG Complex, Lidless
Descriptor: PdpA, VgrG
Authors:Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y, Zhou, Z.H, Horwitz, M.A.
Deposit date:2019-09-08
Release date:2019-10-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.21 Å)
Cite:Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
6U5H
DownloadVisualize
BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
Descriptor: Probable bacteriophage protein Pyocin R2
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon