Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8KCA
DownloadVisualize
BU of 8kca by Molmil
Crystal structure of DDX53 helicase domain
Descriptor: Probable ATP-dependent RNA helicase DDX53
Authors:Park, S, Yang, J.B, Jung, H.S, Kim, H.Y.
Deposit date:2023-08-06
Release date:2023-08-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural insight into crystal structure of helicase domain of DDX53.
Biochem.Biophys.Res.Commun., 677, 2023
6L9X
DownloadVisualize
BU of 6l9x by Molmil
Xenons in frog EPDR1
Descriptor: Ependymin-related 1, XENON
Authors:Park, S.
Deposit date:2019-11-11
Release date:2020-11-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:De novo Phasing Xenons Observed in the Frog Ependymin-Related Protein
Crystals, 10, 2020
8SQF
DownloadVisualize
BU of 8sqf by Molmil
OXA-48 bound to inhibitor CDD-2725
Descriptor: (1M)-3'-(benzyloxy)-5-hydroxy[1,1'-biphenyl]-3,4'-dicarboxylic acid, BICARBONATE ION, Beta-lactamase
Authors:Park, S, Judge, A, Fan, J, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2023-05-04
Release date:2024-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Exploiting the Carboxylate-Binding Pocket of beta-Lactamase Enzymes Using a Focused DNA-Encoded Chemical Library.
J.Med.Chem., 67, 2024
8SQG
DownloadVisualize
BU of 8sqg by Molmil
OXA-48 bound to inhibitor CDD-2801
Descriptor: (1M)-3'-(benzyloxy)-5-[2-(methylamino)-2-oxoethoxy][1,1'-biphenyl]-3,4'-dicarboxylic acid, BICARBONATE ION, Beta-lactamase
Authors:Park, S, Judge, A, Fan, J, Sankaran, B, Palzkill, T.
Deposit date:2023-05-04
Release date:2024-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Exploiting the Carboxylate-Binding Pocket of beta-Lactamase Enzymes Using a Focused DNA-Encoded Chemical Library.
J.Med.Chem., 67, 2024
5U7G
DownloadVisualize
BU of 5u7g by Molmil
Crystal Structure of the Catalytic Core of CBP
Descriptor: CREB-binding protein, ZINC ION
Authors:Park, S, Stanfield, R.L, Martinez-Yamout, M.M, Dyson, H.J, Wilson, I.A, Wright, P.E.
Deposit date:2016-12-12
Release date:2017-06-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Role of the CBP catalytic core in intramolecular SUMOylation and control of histone H3 acetylation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2B86
DownloadVisualize
BU of 2b86 by Molmil
Solution structure of the first Src homology 3 domain of Nck2
Descriptor: Cytoplasmic protein NCK2
Authors:Park, S, Takeuchi, K, Wagner, G.
Deposit date:2005-10-06
Release date:2006-05-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the first SRC homology 3 domain of human nck2
J.BIOMOL.NMR, 34, 2006
1L5Z
DownloadVisualize
BU of 1l5z by Molmil
CRYSTAL STRUCTURE OF THE E121K SUBSTITUTION OF THE RECEIVER DOMAIN OF SINORHIZOBIUM MELILOTI DCTD
Descriptor: C4-DICARBOXYLATE TRANSPORT TRANSCRIPTIONAL REGULATORY PROTEIN DCTD, GLYCEROL, SULFATE ION
Authors:Park, S, Meyer, M, Jones, A.D, Yennawar, H.P, Yennawar, N.H, Nixon, B.T.
Deposit date:2002-03-08
Release date:2002-10-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two-component signaling in the AAA + ATPase DctD: binding Mg2+ and BeF3- selects between alternate dimeric states of the receiver domain
FASEB J., 16, 2002
1L5Y
DownloadVisualize
BU of 1l5y by Molmil
CRYSTAL STRUCTURE OF MG2+ / BEF3-BOUND RECEIVER DOMAIN OF SINORHIZOBIUM MELILOTI DCTD
Descriptor: BERYLLIUM DIFLUORIDE, BERYLLIUM TETRAFLUORIDE ION, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Park, S, Meyer, M, Jones, A.D, Yennawar, H.P, Yennawar, N.H, Nixon, B.T.
Deposit date:2002-03-08
Release date:2002-10-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two-component signaling in the AAA + ATPase DctD: binding Mg2+ and BeF3- selects between alternate dimeric states of the receiver domain
FASEB J., 16, 2002
4FVC
DownloadVisualize
BU of 4fvc by Molmil
HmoB structure with heme
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative uncharacterized protein yhgC
Authors:Park, S.
Deposit date:2012-06-29
Release date:2013-07-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of HmoB with Heme
To be Published
1OWA
DownloadVisualize
BU of 1owa by Molmil
Solution Structural Studies on Human Erythrocyte Alpha Spectrin N Terminal Tetramerization Domain
Descriptor: Spectrin alpha chain, erythrocyte
Authors:Park, S, Caffrey, M.S, Johnson, M.E, Fung, L.W.
Deposit date:2003-03-28
Release date:2004-03-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structural studies on human erythrocyte alpha-spectrin tetramerization site.
J.Biol.Chem., 278, 2003
1ZC1
DownloadVisualize
BU of 1zc1 by Molmil
Ufd1 exhibits the AAA-ATPase fold with two distinct ubiquitin interaction sites
Descriptor: Ubiquitin fusion degradation protein 1
Authors:Park, S, Isaacson, R, Kim, H.T, Silver, P.A, Wagner, G.
Deposit date:2005-04-10
Release date:2005-07-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Ufd1 Exhibits the AAA-ATPase Fold with Two Distinct Ubiquitin Interaction Sites
Structure, 13, 2005
2KNH
DownloadVisualize
BU of 2knh by Molmil
The Solution structure of the eTAFH domain of AML1-ETO complexed with HEB peptide
Descriptor: Protein CBFA2T1, Transcription factor 12
Authors:Park, S, Cierpicki, T, Tonelli, M, Bushweller, J.H.
Deposit date:2009-08-25
Release date:2009-10-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the AML1-ETO eTAFH domain-HEB peptide complex and its contribution to AML1-ETO activity.
Blood, 113, 2009
2KYX
DownloadVisualize
BU of 2kyx by Molmil
Solution structure of the RRM domain of CYP33
Descriptor: Peptidyl-prolyl cis-trans isomerase E
Authors:Park, S, Bushweller, J.H.
Deposit date:2010-06-09
Release date:2010-08-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The PHD3 domain of MLL acts as a CYP33-regulated switch between MLL-mediated activation and repression .
Biochemistry, 49, 2010
2KYU
DownloadVisualize
BU of 2kyu by Molmil
The solution structure of the PHD3 finger of MLL
Descriptor: Histone-lysine N-methyltransferase MLL, ZINC ION
Authors:Park, S, Bushweller, J.H.
Deposit date:2010-06-08
Release date:2010-08-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The PHD3 domain of MLL acts as a CYP33-regulated switch between MLL-mediated activation and repression.
Biochemistry, 49, 2010
1BPI
DownloadVisualize
BU of 1bpi by Molmil
THE STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR AT 125K: DEFINITION OF CARBOXYL-TERMINAL RESIDUES GLYCINE-57 AND ALANINE-58
Descriptor: BOVINE PANCREATIC TRYPSIN INHIBITOR, PHOSPHATE ION
Authors:Parkin, S, Rupp, B, Hope, H.
Deposit date:1995-02-18
Release date:1995-06-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Structure of bovine pancreatic trypsin inhibitor at 125 K definition of carboxyl-terminal residues Gly57 and Ala58.
Acta Crystallogr.,Sect.D, 52, 1996
1JBC
DownloadVisualize
BU of 1jbc by Molmil
CONCANAVALIN A
Descriptor: CALCIUM ION, CONCANAVALIN A, MANGANESE (II) ION
Authors:Parkin, S, Rupp, B, Hope, H.
Deposit date:1996-08-23
Release date:1997-02-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Atomic resolution structure of concanavalin A at 120 K.
Acta Crystallogr.,Sect.D, 52, 1996
6UUP
DownloadVisualize
BU of 6uup by Molmil
Structure of anti-hCD33 conditional scFv
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Anti-CD33 conditional scFv, DI(HYDROXYETHYL)ETHER, ...
Authors:Kimberlin, C.R, Park, S.
Deposit date:2019-10-31
Release date:2020-11-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.20001864 Å)
Cite:Direct control of CAR T cells through small molecule-regulated antibodies.
Nat Commun, 12, 2021
6UY3
DownloadVisualize
BU of 6uy3 by Molmil
Structure of anti-hCD33 conditional scFv with methotrexate
Descriptor: Anti-CD33 conditional scFv, GLYCEROL, METHOTREXATE, ...
Authors:Kimberlin, C.R, Park, S.
Deposit date:2019-11-11
Release date:2020-11-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Direct control of CAR T cells through small molecule-regulated antibodies.
Nat Commun, 12, 2021
5U6H
DownloadVisualize
BU of 5u6h by Molmil
Solution structure of the zinc fingers 1 and 2 of MBNL1
Descriptor: Muscleblind-like protein 1, ZINC ION
Authors:Phukan, P.D, Park, S, Martinez-Yamout, M.M, Zeeb, M, Dyson, H.J, Wright, P.E.
Deposit date:2016-12-08
Release date:2017-08-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Interaction of the Tandem Zinc Finger Domains of Human Muscleblind with Cognate RNA from Human Cardiac Troponin T.
Biochemistry, 56, 2017
5U6L
DownloadVisualize
BU of 5u6l by Molmil
Solution structure of the zinc fingers 3 and 4 of MBNL1
Descriptor: Muscleblind-like protein 1, ZINC ION
Authors:Phukan, P.D, Park, S, Martinez-Yamout, M.M, Zeeb, M, Dyson, H.J, Wright, P.E.
Deposit date:2016-12-08
Release date:2017-08-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Interaction of the Tandem Zinc Finger Domains of Human Muscleblind with Cognate RNA from Human Cardiac Troponin T.
Biochemistry, 56, 2017
5U9B
DownloadVisualize
BU of 5u9b by Molmil
Solution structure of the zinc fingers 1 and 2 of MBNL1 in complex with human cardiac troponin T pre-mRNA
Descriptor: Muscleblind-like protein 1, RNA (5'-R(P*GP*UP*CP*UP*CP*GP*CP*UP*UP*UP*UP*CP*CP*CP*C)-3'), ZINC ION
Authors:Phukan, P.D, Park, S, Martinez-Yamout, M.M, Zeeb, M, Dyson, H.J, Wright, P.E.
Deposit date:2016-12-15
Release date:2017-08-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Interaction of the Tandem Zinc Finger Domains of Human Muscleblind with Cognate RNA from Human Cardiac Troponin T.
Biochemistry, 56, 2017
6J10
DownloadVisualize
BU of 6j10 by Molmil
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
Descriptor: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
Authors:Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
Deposit date:2018-12-27
Release date:2019-04-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019
4NJD
DownloadVisualize
BU of 4njd by Molmil
Structure of p21-activated kinase 4 with a novel inhibitor KY-04031
Descriptor: N-(1H-indazol-5-yl)-N'-[2-(1H-indol-3-yl)ethyl]-6-methoxy-1,3,5-triazine-2,4-diamine, Serine/threonine-protein kinase PAK 4
Authors:Park, S.
Deposit date:2013-11-09
Release date:2014-05-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery and the structural basis of a novel p21-activated kinase 4 inhibitor.
Cancer Lett., 349, 2014
6JLA
DownloadVisualize
BU of 6jla by Molmil
Crystal structure of a mouse ependymin related protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Mammalian ependymin-related protein 1
Authors:Park, S.
Deposit date:2019-03-04
Release date:2020-03-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of three ependymin-related proteins suggest their function as a hydrophobic molecule binder.
Iucrj, 6, 2019
3TVZ
DownloadVisualize
BU of 3tvz by Molmil
Structure of Bacillus subtilis HmoB
Descriptor: Putative uncharacterized protein yhgC
Authors:Choe, J, Choi, S, Park, S.
Deposit date:2011-09-21
Release date:2012-07-11
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus subtilis HmoB is a heme oxygenase with a novel structure.
Bmb Rep, 45, 2012

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon