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5JQS
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BU of 5jqs by Molmil
Crystal structure of deubiquitinase MINDY-1 in complex with Ubiquitin
Descriptor: 1,4-DIETHYLENE DIOXIDE, CHLORIDE ION, Protein FAM63A, ...
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2016-05-05
Release date:2016-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:MINDY-1 Is a Member of an Evolutionarily Conserved and Structurally Distinct New Family of Deubiquitinating Enzymes.
Mol.Cell, 63, 2016
5JKN
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BU of 5jkn by Molmil
Crystal structure of deubiquitinase MINDY-1
Descriptor: DI(HYDROXYETHYL)ETHER, MERCURY (II) ION, PHOSPHATE ION, ...
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:MINDY-1 Is a Member of an Evolutionarily Conserved and Structurally Distinct New Family of Deubiquitinating Enzymes.
Mol.Cell, 63, 2016
6Y6R
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BU of 6y6r by Molmil
Crystal structure of MINDY1 T335D mutant
Descriptor: Ubiquitin carboxyl-terminal hydrolase MINDY-1
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2020-02-27
Release date:2021-03-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
6YJG
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BU of 6yjg by Molmil
Crystal structure of MINDY1 mutant-Y114F
Descriptor: Ubiquitin carboxyl-terminal hydrolase MINDY1
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2020-04-03
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
6Z49
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BU of 6z49 by Molmil
Crystal structure of deubiquitinase Mindy2
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, ...
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2020-05-23
Release date:2021-06-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
6Z7V
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BU of 6z7v by Molmil
Crystal structure of Mindy2 (C266A) in complex with Lys48 linked di-ubiquitin (K48-Ub2)
Descriptor: POTASSIUM ION, Polyubiquitin-C, TETRAETHYLENE GLYCOL, ...
Authors:Abdul Rehman, S.A, Lange, S.M, Kulathu, Y.
Deposit date:2020-06-01
Release date:2021-06-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
6Z90
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BU of 6z90 by Molmil
Crystal structure of MINDY1 mutant-P138A
Descriptor: Ubiquitin carboxyl-terminal hydrolase MINDY-1
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2020-06-03
Release date:2021-06-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
4EHS
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BU of 4ehs by Molmil
Crystal structure of Helicobacter pylori DnaG Primase C terminal domain
Descriptor: BETA-MERCAPTOETHANOL, DNA primase
Authors:Abdul Rehman, S.A, Gourinath, S.
Deposit date:2012-04-04
Release date:2013-05-01
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure and mode of helicase binding of the C-terminal domain of primase from Helicobacter pylori
J.Bacteriol., 195, 2013
6TUV
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BU of 6tuv by Molmil
Crystal structure of Mindy1 in complex with Lys48 linked di-ubiquitin
Descriptor: Polyubiquitin-C, SULFATE ION, Ubiquitin carboxyl-terminal hydrolase MINDY-1
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2020-01-08
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
6TXB
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BU of 6txb by Molmil
Crystal structure of Mindy1 mutant (P138A) in complex with Lys48 linked di-ubiquitin
Descriptor: CHLORIDE ION, Polyubiquitin-C, SODIUM ION, ...
Authors:Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2020-01-14
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
4IM9
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BU of 4im9 by Molmil
Cystal structure of DnaG primase C-terminal domain from Vibrio cholerae
Descriptor: DNA primase
Authors:Abdul Rehman, S.A, Tarique, K.F, Gourinath, S.
Deposit date:2013-01-02
Release date:2014-05-07
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Cystal structure of DnaG primase C-terminal domain from Vibrio cholerae
To be Published
5XW3
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BU of 5xw3 by Molmil
Crystal structure of cystathionine beta-synthase from Bacillus anthracis
Descriptor: O-acetylserine lyase
Authors:Devi, S, Tarique, K.F, Abdul Rehman, S.A, Gourinath, S.
Deposit date:2017-06-29
Release date:2017-08-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural characterization and functional analysis of cystathionine beta-synthase: an enzyme involved in the reverse transsulfuration pathway of Bacillus anthracis.
FEBS J., 284, 2017
4ZGL
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BU of 4zgl by Molmil
Hit Like Protein
Descriptor: ADENOSINE MONOPHOSPHATE, Uncharacterized HIT-like protein HP_0404
Authors:Tarique, K.F, Devi, S, Abdul Rehman, S.A, Gourinath, S.
Deposit date:2015-04-23
Release date:2015-05-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of HINT from Helicobacter pylori.
Acta Crystallogr.,Sect.F, 72, 2016
4ZG5
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BU of 4zg5 by Molmil
Structural and functional insights into Survival endonuclease, an important virulence factor of Brucella abortus
Descriptor: 5'-nucleotidase SurE, MAGNESIUM ION
Authors:Tarique, K.F, Abdul Rehman, S.A, Devi, S, Gourinath, S.
Deposit date:2015-04-22
Release date:2015-05-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional insights into the stationary-phase survival protein SurE, an important virulence factor of Brucella abortus
Acta Crystallogr.,Sect.F, 72, 2016
4H7O
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BU of 4h7o by Molmil
Crystal structure of Serine acetyltransferase from Vibrio cholerae O1 biovar El Tor N16961
Descriptor: ARGININE, CYSTEINE, SODIUM ION, ...
Authors:Tarique, K.F, Abdul Rehman, S.A, Gourinath, S.
Deposit date:2012-09-20
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure of Serine acetyltransferase from Vibrio cholerae O1 biovar El Tor N16961.
To be Published
4QEZ
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BU of 4qez by Molmil
Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Bacillus anthracis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, ADENINE
Authors:Tarique, K.F, Devi, S, Abdul Rehman, S.A, Gourinath, S.
Deposit date:2014-05-19
Release date:2014-06-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Bacillus anthracis
To be Published
4QXD
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BU of 4qxd by Molmil
Crystal structure of Inositol Polyphosphate 1-Phosphatase from Entamoeba histolytica
Descriptor: 3'(2'),5'-bisphosphate nucleotidase, putative, MAGNESIUM ION, ...
Authors:Tarique, K.F, Abdul Rehman, S.A, Betzel, C, Gourinath, S.
Deposit date:2014-07-19
Release date:2014-08-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure-based identification of inositol polyphosphate 1-phosphatase from Entamoeba histolytica
Acta Crystallogr.,Sect.D, 70, 2014
4S1Z
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BU of 4s1z by Molmil
Crystal structure of TRABID NZF1 in complex with K29 linked di-Ubiquitin
Descriptor: Ubiquitin, Ubiquitin thioesterase ZRANB1, ZINC ION
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Campbell, D.G, Morrice, N.A, Johnson, C, Toth, R, Kulathu, Y.
Deposit date:2015-01-16
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:K29-selective ubiquitin binding domain reveals structural basis of specificity and heterotypic nature of k29 polyubiquitin.
Mol.Cell, 58, 2015
4S22
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BU of 4s22 by Molmil
Crystal structure of K29 linked di-Ubiquitin
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, IODIDE ION, ...
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Campbell, D.G, Morrice, N.A, Johnson, C, Toth, R, Kulathu, Y.
Deposit date:2015-01-17
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:K29-selective ubiquitin binding domain reveals structural basis of specificity and heterotypic nature of k29 polyubiquitin.
Mol.Cell, 58, 2015
6FGE
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BU of 6fge by Molmil
Crystal structure of human ZUFSP/ZUP1 in complex with ubiquitin
Descriptor: ACETATE ION, AMMONIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Kwasna, D, Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2018-01-10
Release date:2018-04-04
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Discovery and Characterization of ZUFSP/ZUP1, a Distinct Deubiquitinase Class Important for Genome Stability.
Mol. Cell, 70, 2018
5MN9
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BU of 5mn9 by Molmil
Crystal structure of MINDY-1 tMIU in complex with K48-diUb
Descriptor: Ubiquitin carboxyl-terminal hydrolase MINDY-1, Ubiquitin-40S ribosomal protein S27a
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Kulathu, Y.
Deposit date:2016-12-13
Release date:2017-01-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A single MIU motif of MINDY-1 recognizes K48-linked polyubiquitin chains.
EMBO Rep., 18, 2017
7NPI
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BU of 7npi by Molmil
Crystal structure of Mindy2 (C266A) in complex with Lys48-linked penta-ubiquitin (K48-Ub5)
Descriptor: CHLORIDE ION, Polyubiquitin-C, SODIUM ION, ...
Authors:Lange, S.M, Armstrong, L.A, Kulathu, Y.
Deposit date:2021-02-26
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
6AHI
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BU of 6ahi by Molmil
Crystal structure of O-acetylserine dependent cystathionine beta-synthase from Helicobacter pylori.
Descriptor: Cysteine synthase, METHIONINE
Authors:Tarique, F.K, Devi, S, Rehman, S.A.A.
Deposit date:2018-08-19
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification and characterization of Helicobacter pylori O-acetylserine-dependent cystathionine beta-synthase, a distinct member of the PLP-II family.
Mol.Microbiol., 112, 2019
4Y1H
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BU of 4y1h by Molmil
Crystal structure of K33 linked tri-Ubiquitin
Descriptor: 1,2-ETHANEDIOL, Ubiquitin-40S ribosomal protein S27a
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y.
Deposit date:2015-02-07
Release date:2015-03-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations.
Biochem.J., 467, 2015
4XYZ
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BU of 4xyz by Molmil
Crystal structure of K33 linked di-Ubiquitin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, IODIDE ION, ...
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y.
Deposit date:2015-02-03
Release date:2015-03-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations.
Biochem.J., 467, 2015

 

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