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4Q6P
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BU of 4q6p by Molmil
Structural analysis of the Zn-form I of Helicobacter pylori Csd4, a D,L-carboxypeptidase
Descriptor: 2,6-DIAMINOPIMELIC ACID, CALCIUM ION, Conserved hypothetical secreted protein, ...
Authors:Kim, H.S, Kim, J, Im, H.N, An, D.R, Lee, M, Hesek, D, Mobashery, S, Kim, J.Y, Cho, K, Yoon, H.J, Han, B.W, Lee, B.I, Suh, S.W.
Deposit date:2014-04-23
Release date:2014-11-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape
Acta Crystallogr.,Sect.D, 70, 2014
7VGX
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BU of 7vgx by Molmil
Neuropeptide Y Y1 Receptor (NPY1R) in Complex with G Protein and its endogeneous Peptide-Agonist Neuropeptide Y (NPY)
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Park, C, Kim, J, Jeong, H, Kang, H, Bang, I, Choi, H.-J.
Deposit date:2021-09-19
Release date:2022-02-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of neuropeptide Y signaling through Y1 receptor
Nat Commun, 13, 2022
7YON
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BU of 7yon by Molmil
Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Kang, H, Park, C, Kim, J, Choi, H.-J.
Deposit date:2022-08-01
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural basis for Y2 receptor-mediated neuropeptide Y and peptide YY signaling.
Structure, 31, 2023
7YOO
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BU of 7yoo by Molmil
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Kang, H, Park, C, Kim, J, Choi, H.-J.
Deposit date:2022-08-01
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural basis for Y2 receptor-mediated neuropeptide Y and peptide YY signaling.
Structure, 31, 2023
2F6M
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BU of 2f6m by Molmil
Structure of a Vps23-C:Vps28-N subcomplex
Descriptor: DECYLAMINE-N,N-DIMETHYL-N-OXIDE, MAGNESIUM ION, Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease, ...
Authors:Kostelansky, M.S, Lee, S, Kim, J, Hurley, J.H.
Deposit date:2005-11-29
Release date:2006-04-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional organization of the ESCRT-I trafficking complex.
Cell(Cambridge,Mass.), 125, 2006
4OGG
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BU of 4ogg by Molmil
Crystal Structure of Arabidopsis thaliana DJ-1d with glyoxylate as substrate analog
Descriptor: Protein DJ-1 homolog D
Authors:Choi, D, Kim, J, Ryu, K.-S, Park, C.
Deposit date:2014-01-16
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stereospecific mechanism of DJ-1 glyoxalases inferred from their hemithioacetal-containing crystal structures.
Febs J., 281, 2014
4OGF
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BU of 4ogf by Molmil
Crystal Structure of Human DJ-1 with glyoxylate as substrate analog
Descriptor: Protein DJ-1
Authors:Choi, D, Kim, J, Ryu, K.-S, Park, C.
Deposit date:2014-01-16
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stereospecific mechanism of DJ-1 glyoxalases inferred from their hemithioacetal-containing crystal structures.
Febs J., 281, 2014
2XVT
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BU of 2xvt by Molmil
Structure of the extracellular domain of human RAMP2
Descriptor: CALCIUM ION, RECEPTOR ACTIVITY-MODIFYING PROTEIN 2
Authors:Quigley, A, Pike, A.C.W, Burgess-Brown, N, Krojer, T, Shrestha, L, Goubin, S, Kim, J, Das, S, Muniz, J.R.C, Canning, P, Chaikuad, A, Vollmar, M, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bountra, C, Barr, A.J, Carpenter, E.P.
Deposit date:2010-10-31
Release date:2010-12-29
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the Extracellular Domain of Human Ramp2
To be Published
7KC4
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BU of 7kc4 by Molmil
Human WLS in complex with WNT8A
Descriptor: 1-CIS-9-OCTADECANOYL-2-CIS-9-HEXADECANOYL PHOSPHATIDYL GLYCEROL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
Authors:Nygaard, R, Jia, Y, Kim, J, Ross, D, Parisi, G, Clarke, O.B, Virshup, D.M, Mancia, F.
Deposit date:2020-10-05
Release date:2021-01-06
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural Basis of WLS/Evi-Mediated Wnt Transport and Secretion.
Cell, 184, 2021
4OFW
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BU of 4ofw by Molmil
Crystal Structure of Arabidopsis thaliana DJ-1d
Descriptor: Protein DJ-1 homolog D
Authors:Choi, D, Kim, J, Ryu, K.-S, Park, C.
Deposit date:2014-01-15
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Stereospecific mechanism of DJ-1 glyoxalases inferred from their hemithioacetal-containing crystal structures.
Febs J., 281, 2014
5U0A
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BU of 5u0a by Molmil
CRISPR RNA-guided surveillance complex
Descriptor: CRISPR-associated protein, Cas5e family, Cse1 family, ...
Authors:Xiao, Y, Luo, M, Hayes, R.P, Kim, J, Ng, S, Ding, F, Liao, M, Ke, A.
Deposit date:2016-11-23
Release date:2017-08-09
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System.
Cell, 170, 2017
5U07
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BU of 5u07 by Molmil
CRISPR RNA-guided surveillance complex
Descriptor: CRISPR-associated protein, Cas5e family, Cse1 family, ...
Authors:Xiao, Y, Luo, M, Hayes, R.P, Kim, J, Ng, S, Ding, F, Liao, M, Ke, A.
Deposit date:2016-11-23
Release date:2017-08-09
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System.
Cell, 170, 2017
3MDZ
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BU of 3mdz by Molmil
Crystal Structure of Human Carbonic Anhydrase VII [isoform 1], CA7
Descriptor: 6-ethoxy-1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 7, GLYCEROL, ...
Authors:Ugochukwu, E, Shafqat, N, Pilka, E, Chaikuad, A, Krojer, T, Muniz, J, Kim, J, Bray, J, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Carpenter, E.P, Yue, W.W, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2010-03-31
Release date:2010-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal Structure of Human Carbonic Anhydrase VII [isoform 1], CA7
to be published
5DLB
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BU of 5dlb by Molmil
Crystal structure of chaperone EspG3 of ESX-3 type VII secretion system from Mycobacterium marinum M
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, PLATINUM (II) ION, ...
Authors:Chan, S, Arbing, M.A, Kim, J, Kahng, S, Sawaya, M.R, Eisenberg, D.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-09-04
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural Variability of EspG Chaperones from Mycobacterial ESX-1, ESX-3, and ESX-5 Type VII Secretion Systems.
J. Mol. Biol., 431, 2019
8W9U
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BU of 8w9u by Molmil
Crystal structure of CspR from Bacillus subtilis complexed with SAH
Descriptor: GLYCEROL, Putative tRNA (cytidine(34)-2'-O)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Lee, Y, Kim, J.
Deposit date:2023-09-05
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of CspR from Bacillus subtilis complexed with SAH
To be published
7WM5
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BU of 7wm5 by Molmil
Crystal structure of apo TrmM from Mycoplasma capricolum
Descriptor: Methyltransferase
Authors:Jeong, H, Kim, J.
Deposit date:2022-01-14
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and functional characterization of TrmM in m 6 A modification of bacterial tRNA.
Protein Sci., 31, 2022
7WM6
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BU of 7wm6 by Molmil
Crystal structure of SAH-bound TrmM from Mycoplasma capricolum
Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
Authors:Jeong, H, Kim, J.
Deposit date:2022-01-14
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural and functional characterization of TrmM in m 6 A modification of bacterial tRNA.
Protein Sci., 31, 2022
2F66
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BU of 2f66 by Molmil
Structure of the ESCRT-I endosomal trafficking complex
Descriptor: Protein SRN2, SULFATE ION, Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease, ...
Authors:Kostelansky, M.S, Lee, S, Kim, J, Hurley, J.H.
Deposit date:2005-11-28
Release date:2006-04-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional organization of the ESCRT-I trafficking complex.
Cell(Cambridge,Mass.), 125, 2006
1U5T
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BU of 1u5t by Molmil
Structure of the ESCRT-II endosomal trafficking complex
Descriptor: Defective in vacuolar protein sorting; Vps36p, Hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region, appears to be functionally related to SNF7; Snf8p
Authors:Hierro, A, Sun, J, Rusnak, A.S, Kim, J, Prag, G, Emr, S.D, Hurley, J.H.
Deposit date:2004-07-28
Release date:2004-09-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of ESCRT-II endosomal trafficking complex
Nature, 431, 2004
5CYU
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BU of 5cyu by Molmil
Structure of the soluble domain of EccB1 from the Mycobacterium smegmatis ESX-1 secretion system.
Descriptor: Conserved membrane protein
Authors:Arbing, M.A, Chan, S, Kahng, S, Kim, J, Eisenberg, D.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-07-30
Release date:2015-08-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Structures of EccB1 and EccD1 from the core complex of the mycobacterial ESX-1 type VII secretion system.
Bmc Struct.Biol., 16, 2016
3TOY
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BU of 3toy by Molmil
CRYSTAL STRUCTURE OF ENOLASE BRADO_4202 (TARGET EFI-501651) FROM Bradyrhizobium sp. ORS278 WITH CALCIUM AND ACETATE BOUND
Descriptor: ACETATE ION, CALCIUM ION, Mandelate racemase/muconate lactonizing enzyme family protein, ...
Authors:Patskovsky, Y, Kim, J, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammond, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-09-06
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CRYSTAL STRUCTURE OF MANDELATE RACEMASE FROM Bradyrhizobium sp. ORS278
To be Published
3TTE
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BU of 3tte by Molmil
Crystal structure of enolase brado_4202 (target EFI-501651) from Bradyrhizobium complexed with magnesium and mandelic acid
Descriptor: (S)-MANDELIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Patskovsky, Y, Kim, J, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammond, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-09-14
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Mandelate Racemase from Bradyrhizobium Sp. Ors278
To be Published
3I4F
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BU of 3i4f by Molmil
Structure of putative 3-oxoacyl-reductase from bacillus thuringiensis
Descriptor: 3-oxoacyl-[acyl-carrier protein] reductase
Authors:Ramagopal, U.A, Kim, J, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-01
Release date:2009-07-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of putative 3-oxoacyl-reductase from bacillus thuringiensis
To be published
3MIN
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BU of 3min by Molmil
NITROGENASE MOFE PROTEIN FROM AZOTOBACTER VINELANDII, OXIDIZED STATE
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE(8)-S(7) CLUSTER, ...
Authors:Peters, J.W, Stowell, M.H.B, Soltis, S.M, Day, M.W, Kim, J, Rees, D.C.
Deposit date:1996-12-20
Release date:1997-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Redox-dependent structural changes in the nitrogenase P-cluster.
Biochemistry, 36, 1997
4MB6
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BU of 4mb6 by Molmil
Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
Descriptor: Adenine phosphoribosyltransferase, SODIUM ION
Authors:Pavithra, G.C, Kim, J, Hegde, R.P, Almo, S.C, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-19
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis
To be published

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