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6S05
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BU of 6s05 by Molmil
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Kargas, V, Warren, A.J.
Deposit date:2019-06-13
Release date:2019-06-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Mechanism of completion of peptidyltransferase centre assembly in eukaryotes.
Elife, 8, 2019
4OKQ
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BU of 4okq by Molmil
Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans
Descriptor: HISTIDINE, Hut operon positive regulatory protein, MAGNESIUM ION
Authors:Thiruselvam, V, Ponnuswamy, M.N, Kumarevel, T.S.
Deposit date:2014-01-22
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans
Biochem.Biophys.Res.Commun., 446, 2014
5HBJ
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BU of 5hbj by Molmil
CDK8-CYCC IN COMPLEX WITH 8-[2-Amino-3-chloro-5-(1-methyl-1H-indazol-5-yl)-pyridin-4-yl]-2,8-diaza-spiro[4.5]decan-1-one
Descriptor: 1,2-ETHANEDIOL, 8-[2-azanyl-3-chloranyl-5-(1-methylindazol-5-yl)pyridin-4-yl]-2,8-diazaspiro[4.5]decan-1-one, Cyclin-C, ...
Authors:Musil, D, Blagg, J, Mallinger, A.
Deposit date:2015-12-31
Release date:2016-02-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Small-Molecule Modulators of the Mediator Complex-Associated Kinases CDK8 and CDK19.
J.Med.Chem., 59, 2016
8R1C
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BU of 8r1c by Molmil
SD1-2 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SD1-2 fab heavy chain, SD1-2 fab light chain, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
Deposit date:2023-11-01
Release date:2024-03-13
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:The SARS-CoV-2 neutralizing antibody response to SD1 and its evasion by BA.2.86.
Nat Commun, 15, 2024
6O9R
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BU of 6o9r by Molmil
The capsid structure of empty AAVrh.10 particles
Descriptor: Capsid protein VP1
Authors:Mietzsch, M, Agbandje-McKenna, M.
Deposit date:2019-03-14
Release date:2019-12-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8.
J.Virol., 94, 2020
6OV1
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BU of 6ov1 by Molmil
Structure of Staphylococcus aureus RNase P protein mutant with defective mRNA degradation activity
Descriptor: Ribonuclease P protein component
Authors:Ha, L, Colquhoun, J, Noinaj, N, Das, C, Dunman, P, Flaherty, D.P.
Deposit date:2019-05-06
Release date:2020-12-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Genetic and biochemical characterization of Staphylococcus aureus RnpA
To Be Published
8P08
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BU of 8p08 by Molmil
Crystal structure of human CLK1 in complex with Leucettinib-21
Descriptor: (4~{Z})-4-(1,3-benzothiazol-6-ylmethylidene)-2-[[(2~{R})-1-methoxy-4-methyl-pentan-2-yl]amino]-1~{H}-imidazol-5-one, Dual specificity protein kinase CLK1
Authors:Kraemer, A, Schroeder, M, Meijer, L, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2023-05-09
Release date:2023-05-17
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chemical, Biochemical, Cellular, and Physiological Characterization of Leucettinib-21, a Down Syndrome and Alzheimer's Disease Drug Candidate.
J.Med.Chem., 66, 2023
6RZZ
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BU of 6rzz by Molmil
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Kargas, V, Warren, A.J.
Deposit date:2019-06-13
Release date:2019-06-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of completion of peptidyltransferase centre assembly in eukaryotes.
Elife, 8, 2019
1HVE
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BU of 1hve by Molmil
STRUCTURAL AND ELECTROPHYSIOLOGICAL ANALYSIS OF ANNEXIN V MUTANTS. MUTAGENESIS OF HUMAN ANNEXIN V, AN IN VITRO VOLTAGE-GATED CALCIUM CHANNEL, PROVIDES INFORMATION ABOUT THE STRUCTURAL FEATURES OF THE ION PATHWAY, THE VOLTAGE SENSOR AND THE ION SELECTIVITY FILTER
Descriptor: ANNEXIN V, CALCIUM ION, SULFATE ION
Authors:Burger, A, Huber, R.
Deposit date:1994-06-29
Release date:1995-03-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and electrophysiological analysis of annexin V mutants. Mutagenesis of human annexin V, an in vitro voltage-gated calcium channel, provides information about the structural features of the ion pathway, the voltage sensor and the ion selectivity filter
J.Mol.Biol., 237, 1994
5IQY
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BU of 5iqy by Molmil
Structure of apo-Dehydroascorbate Reductase from Pennisetum Glaucum phased by Iodide-SAD method
Descriptor: Dehydroascorbate reductase, IODIDE ION
Authors:Das, B.K, Kumar, A, Manidola, P, Arockiasamy, A.
Deposit date:2016-03-11
Release date:2016-05-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Non-native ligands define the active site of Pennisetum glaucum (L.) R. Br dehydroascorbate reductase
Biochem.Biophys.Res.Commun., 473, 2016
6TVO
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BU of 6tvo by Molmil
Human CRM1-RanGTP in complex with Leptomycin B
Descriptor: Exportin-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Shaikhqasem, A, Ficner, R.
Deposit date:2020-01-10
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Characterization of Inhibition Reveals Distinctive Properties for Human andSaccharomyces cerevisiaeCRM1.
J.Med.Chem., 63, 2020
5HBH
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BU of 5hbh by Molmil
CDK8-CYCC IN COMPLEX WITH 5-{5-Chloro-4-[1-(2-methoxy-ethyl)-1,8-diaza-spiro[4.5]dec-8-yl]-pyridin-3-yl}-1-methyl-1,3-dihydro-benzo[c]isothiazole 2,2-dioxide
Descriptor: 1,2-ETHANEDIOL, 5-[5-chloranyl-4-[1-(2-methoxyethyl)-1,8-diazaspiro[4.5]decan-8-yl]pyridin-3-yl]-1-methyl-3~{H}-2,1-benzothiazole 2,2-dioxide, Cyclin-C, ...
Authors:Musil, D, Blagg, J, Mallinger, A.
Deposit date:2015-12-31
Release date:2016-02-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Small-Molecule Modulators of the Mediator Complex-Associated Kinases CDK8 and CDK19.
J.Med.Chem., 59, 2016
3U0N
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BU of 3u0n by Molmil
Crystal structure of the engineered fluorescent protein mRuby, crystal form 2
Descriptor: SULFATE ION, mRuby
Authors:Akerboom, J, Looger, L.L, Schreiter, E.R.
Deposit date:2011-09-28
Release date:2012-10-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Front Mol Neurosci, 6, 2013
1KTX
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BU of 1ktx by Molmil
KALIOTOXIN (1-37) SHOWS STRUCTURAL DIFFERENCES WITH RELATED POTASSIUM CHANNEL BLOCKERS
Descriptor: KALIOTOXIN
Authors:Fernandez, I, Romi, R, Szendefi, S, Martin-Eauclaire, M.-F, Rochat, H, Van Rietschtoten, J, Pons, M, Giralt, E.
Deposit date:1994-06-02
Release date:1995-01-26
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Kaliotoxin (1-37) shows structural differences with related potassium channel blockers.
Biochemistry, 33, 1994
4M8T
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BU of 4m8t by Molmil
RSK2 T493M C-Terminal Kinase Domain in complex with 3-(3-(1H-pyrazol-4-yl)phenyl)-2-cyanoacrylamide
Descriptor: (2E)-2-cyano-3-[3-(1H-pyrazol-4-yl)phenyl]prop-2-enamide, Ribosomal protein S6 kinase alpha-3, SODIUM ION
Authors:Miller, R.M, Taunton, J.
Deposit date:2013-08-13
Release date:2014-10-22
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (3 Å)
Cite:Covalent docking of large libraries for the discovery of chemical probes.
Nat.Chem.Biol., 10, 2014
1SN1
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BU of 1sn1 by Molmil
STRUCTURE OF SCORPION NEUROTOXIN BMK M1
Descriptor: PROTEIN (NEUROTOXIN BMK M1)
Authors:He, X.L, Li, H.M, Liu, X.Q, Zeng, Z.H, Wang, D.C.
Deposit date:1998-11-12
Release date:1999-11-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of two alpha-like scorpion toxins: non-proline cis peptide bonds and implications for new binding site selectivity on the sodium channel.
J.Mol.Biol., 292, 1999
8QB7
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BU of 8qb7 by Molmil
Pil1 in native eisosome lattice bound to plasma membrane microdomain
Descriptor: Sphingolipid long chain base-responsive protein PIL1
Authors:Kefauver, J.M, Zou, L, Loewith, R.J, Defosses, A.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBD
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BU of 8qbd by Molmil
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, Sphingolipid long chain base-responsive protein PIL1
Authors:Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBF
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BU of 8qbf by Molmil
Compact state - Pil1 dimer with lipid headgroups fitted in native eisosome lattice bound to plasma membrane microdomain
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, PHOSPHOSERINE, Sphingolipid long chain base-responsive protein PIL1
Authors:Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBG
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BU of 8qbg by Molmil
Stretched state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
Descriptor: Sphingolipid long chain base-responsive protein PIL1
Authors:Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBE
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BU of 8qbe by Molmil
Compact state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
Descriptor: Sphingolipid long chain base-responsive protein PIL1
Authors:Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QB9
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BU of 8qb9 by Molmil
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture -PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol 30:20:20:30)
Descriptor: Sphingolipid long chain base-responsive protein PIL1
Authors:Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QB8
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BU of 8qb8 by Molmil
Lsp1 in native eisosome lattice bound to plasma membrane microdomain
Descriptor: Sphingolipid long chain base-responsive protein LSP1
Authors:Kefauver, J.M, Zou, L, Loewith, R.J, Defosses, A.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
7MJR
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BU of 7mjr by Molmil
Vip4Da2 toxin structure
Descriptor: CALCIUM ION, SULFATE ION, Vip4Da1 protein
Authors:Rydel, T.J, Duda, D, Zheng, M, Henry, A.
Deposit date:2021-04-20
Release date:2021-05-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Structural and functional insights into the first Bacillus thuringiensis vegetative insecticidal protein of the Vpb4 fold, active against western corn rootworm.
Plos One, 16, 2021
8QBB
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BU of 8qbb by Molmil
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/-sterol (DOPC, DOPE, DOPS, PI(4,5)P2 50:20:20:10)
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Sphingolipid long chain base-responsive protein PIL1
Authors:Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
Deposit date:2023-08-24
Release date:2024-07-24
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024

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