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8HNP
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BU of 8hnp by Molmil
Archaeal transcription factor Mutant
Descriptor: Archaeal transcription regulator
Authors:Bae, D.W, Cha, S.S.
Deposit date:2022-12-08
Release date:2023-09-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:An archaeal transcription factor EnfR with a novel 'eighth note' fold controls hydrogen production of a hyperthermophilic archaeon Thermococcus onnurineus NA1.
Nucleic Acids Res., 51, 2023
4W5J
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BU of 4w5j by Molmil
New structural conformations of adenylate kinase from Streptococcus pneumoniae D39 with Ap5A
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION
Authors:Thach, T.T, Lee, S.H.
Deposit date:2014-08-18
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:New crystal structures of adenylate kinase from Streptococcus pneumoniae D39 in two conformations.
Acta Crystallogr.,Sect.F, 70, 2014
5ZRD
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BU of 5zrd by Molmil
Tyrosinase from Burkholderia thailandensis (BtTYR) at low pH condition
Descriptor: CITRIC ACID, COPPER (II) ION, GLYCEROL, ...
Authors:Lee, S, Son, H.-F, Kim, K.-J.
Deposit date:2018-04-24
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Highly Efficient Production of Catechol Derivatives at Acidic pH by Tyrosinase from Burkholderia thailandensis
Acs Catalysis, 8, 2018
5ZRE
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BU of 5zre by Molmil
Tyrosinase from Burkholderia thailandensis (BtTYR) at high pH condition
Descriptor: COPPER (II) ION, GLYCEROL, OXYGEN ATOM, ...
Authors:Lee, S, Son, H.-F, Kim, K.-J.
Deposit date:2018-04-24
Release date:2018-10-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Highly Efficient Production of Catechol Derivatives at Acidic pH by Tyrosinase from Burkholderia thailandensis
Acs Catalysis, 8, 2018
3V6A
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BU of 3v6a by Molmil
Helical repeat structure of apoptosis inhibitor 5 reveals protein-protein interaction modules
Descriptor: Apoptosis inhibitor 5
Authors:Lee, B.I, Han, B.G, Lee, S.J.
Deposit date:2011-12-19
Release date:2012-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Helical repeat structure of apoptosis inhibitor 5 reveals protein-protein interaction modules.
J.Biol.Chem., 287, 2012
7AYG
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BU of 7ayg by Molmil
oxalyl-CoA decarboxylase from Methylorubrum extorquens with bound TPP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative oxalyl-CoA decarboxylase (Oxc, ...
Authors:Pfister, P, Burgener, S, Nattermann, M, Zarzycki, J, Erb, T.J.
Deposit date:2020-11-12
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineering a Highly Efficient Carboligase for Synthetic One-Carbon Metabolism.
Acs Catalysis, 11, 2021
7B2E
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BU of 7b2e by Molmil
quadruple mutant of oxalyl-CoA decarboxylase from Methylorubrum extorquens with bound TPP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative oxalyl-CoA decarboxylase (Oxc, ...
Authors:Pfister, P, Burgener, S, Nattermann, M, Zarzycki, J, Erb, T.J.
Deposit date:2020-11-26
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Engineering a Highly Efficient Carboligase for Synthetic One-Carbon Metabolism.
Acs Catalysis, 11, 2021
8IKR
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BU of 8ikr by Molmil
Crystal structure of DpaA
Descriptor: YkuD domain-containing protein
Authors:Wang, H.-J, Hsieh, K.-Y, Lee, S.-H, Chang, C.-I.
Deposit date:2023-03-01
Release date:2023-10-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the hydrolytic activity of the transpeptidase-like protein DpaA to detach Braun's lipoprotein from peptidoglycan.
Mbio, 14, 2023
2MX0
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BU of 2mx0 by Molmil
Solution structure of HP0268 from Helicobacter pylori
Descriptor: Uncharacterized protein HP_0268
Authors:Lee, K.Y.
Deposit date:2014-12-05
Release date:2015-12-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure-based functional identification of Helicobacter pylori HP0268 as a nuclease with both DNA nicking and RNase activities
Nucleic Acids Res., 43, 2015
3BF7
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BU of 3bf7 by Molmil
1.1 resolution structure of ybfF, a new esterase from Escherichia coli: a unique substrate-binding crevice generated by domain arrangement
Descriptor: Esterase YbfF
Authors:Park, S.K, Kim, J.S.
Deposit date:2007-11-21
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution structure of ybfF from Escherichia coli K12: a unique substrate-binding crevice generated by domain arrangement
J.Mol.Biol., 376, 2008
3BF8
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BU of 3bf8 by Molmil
1.1 resolution structure of ybfF, a new esterase from Escherichia coli: a unique substrate-binding crevice generated by domain arrangement
Descriptor: Esterase YbfF, MALONIC ACID
Authors:Park, S.K, Kim, J.S.
Deposit date:2007-11-21
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:High-resolution structure of ybfF from Escherichia coli K12: a unique substrate-binding crevice generated by domain arrangement
J.Mol.Biol., 376, 2008
4RX5
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BU of 4rx5 by Molmil
Bruton's tyrosine kinase (BTK) with pyridazinone compound 23
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, GLYCEROL, N-(6-fluoro-2-methyl-3-{5-[(5-methyl-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrazin-2-yl)amino]-6-oxo-1,6-dihydropyridazin-3-yl}phenyl)-1-benzothiophene-2-carboxamide, ...
Authors:Eigenbrot, C, Yu, C.
Deposit date:2014-12-08
Release date:2015-12-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.356 Å)
Cite:Discovery of highly potent and selective Bruton's tyrosine kinase inhibitors: Pyridazinone analogs with improved metabolic stability.
Bioorg.Med.Chem.Lett., 26, 2016
5Y9J
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BU of 5y9j by Molmil
BAFF in complex with belimumab
Descriptor: Tumor necrosis factor ligand superfamily member 13B, belibumab light chain, belimumab heavy chain
Authors:Heo, Y.-S, Shin, W.
Deposit date:2017-08-25
Release date:2018-02-21
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:BAFF-neutralizing interaction of belimumab related to its therapeutic efficacy for treating systemic lupus erythematosus.
Nat Commun, 9, 2018
5Y9K
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BU of 5y9k by Molmil
Structure of the belimumab Fab fragment
Descriptor: belimumab heavy chain, belimumab light chain
Authors:Heo, Y.-S, Shin, W.
Deposit date:2017-08-25
Release date:2018-02-21
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:BAFF-neutralizing interaction of belimumab related to its therapeutic efficacy for treating systemic lupus erythematosus.
Nat Commun, 9, 2018
2WZZ
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BU of 2wzz by Molmil
AMP-C BETA-LACTAMASE (PSEUDOMONAS AERUGINOSA)IN COMPLEX WITH compound M-03
Descriptor: (3R)-1-[(4R)-AZEPAN-4-YLCARBAMOYL]-3-(SULFOAMINO)-L-PROLINE, BETA-LACTAMASE, CHLORIDE ION
Authors:Fitzgerald, P.M.D, Sharma, N, Lu, J.
Deposit date:2009-12-03
Release date:2010-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Side Chain Sar of Bicyclic Beta-Lactamase Inhibitors (Blis). 1. Discovery of a Class C Bli for Combination with Imipinem.
Bioorg.Med.Chem.Lett., 20, 2010
1MVE
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BU of 1mve by Molmil
Crystal structure of a natural circularly-permutated jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenes
Descriptor: CALCIUM ION, Truncated 1,3-1,4-beta-D-glucanase
Authors:Tsai, L.-C, Shyur, L.-F, Lee, S.-H, Lin, S.-S, Yuan, H.S.
Deposit date:2002-09-25
Release date:2003-07-15
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Natural Circularly Permuted Jellyroll Protein: 1,3-1,4-beta-D-Glucanase from Fibrobacter succinogenes.
J.Mol.Biol., 330, 2003
2WZX
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BU of 2wzx by Molmil
AMP-C BETA-LACTAMASE (PSEUDOMONAS AERUGINOSA)IN COMPLEX WITH compound M-02
Descriptor: (3R)-1-[(4S)-azepan-4-ylcarbamoyl]-3-(sulfoamino)-L-proline, BETA-LACTAMASE, CHLORIDE ION
Authors:Fitzgerald, P.M.D, Sharma, N, Lu, J.
Deposit date:2009-12-03
Release date:2010-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Side Chain Sar of Bicyclic Beta-Lactamase Inhibitors (Blis). 1. Discovery of a Class C Bli for Combination with Imipinem.
Bioorg.Med.Chem.Lett., 20, 2010
7F3V
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BU of 7f3v by Molmil
Crystal structure of YfiH with C107A mutation in complex with endogenous UDP-MurNAc
Descriptor: (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHOSPHATE ION, ...
Authors:Lee, M.S, Hsieh, K.Y, Chang, C.I.
Deposit date:2021-06-17
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Basis for the Peptidoglycan-Editing Activity of YfiH.
Mbio, 13, 2021
5JJA
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BU of 5jja by Molmil
Crystal structure of a PP2A B56gamma/BubR1 complex
Descriptor: Mitotic checkpoint serine/threonine-protein kinase BUB1 beta, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform
Authors:Wang, Z, Wang, J, Rao, Z, Xu, W.
Deposit date:2016-04-22
Release date:2016-07-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a PP2A B56-BubR1 complex and its implications for PP2A substrate recruitment and localization.
Protein Cell, 7, 2016
4QD4
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BU of 4qd4 by Molmil
Structure of ADC-68, a Novel Carbapenem-Hydrolyzing Class C Extended-Spectrum -Lactamase from Acinetobacter baumannii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-lactamase ADC-68, CITRIC ACID
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-05-13
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of ADC-68, a novel carbapenem-hydrolyzing class C extended-spectrum beta-lactamase isolated from Acinetobacter baumannii
Acta Crystallogr.,Sect.D, 70, 2014
6JC2
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BU of 6jc2 by Molmil
Crystal structure of the Fab fragment of ipilimumab
Descriptor: SULFATE ION, ipilimumab fab heavy chain, ipilimumab fab light chain
Authors:Heo, Y.S.
Deposit date:2019-01-27
Release date:2019-09-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of the Fab Fragment of an Anti-CTLA-4 Antibody, Ipilimumab, Used for Cancer Immunotherapy
Bull.Korean Chem.Soc., 40, 2019
6J52
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BU of 6j52 by Molmil
Crystal structure of CARD-only protein in frog virus 3
Descriptor: Caspase recruitment domain-only protein
Authors:Park, H.H, Kwon, S.
Deposit date:2019-01-10
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Structural transformation-mediated dimerization of caspase recruitment domain revealed by the crystal structure of CARD-only protein in frog virus 3.
J. Struct. Biol., 205, 2019
6K8H
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BU of 6k8h by Molmil
Crystal structure of an omega-transaminase from Sphaerobacter thermophilus
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, Aminotransferase class-III
Authors:Park, H.H, Kwon, S.
Deposit date:2019-06-12
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the enzyme specificity of a novel omega-transaminase from the thermophilic bacterium Sphaerobacter thermophilus.
J.Struct.Biol., 208, 2019
5D8D
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BU of 5d8d by Molmil
Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii
Descriptor: D-alanine--D-alanine ligase
Authors:Huynh, K.H, Hong, M.K, Kang, L.W.
Deposit date:2015-08-17
Release date:2016-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015
3K9K
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BU of 3k9k by Molmil
Transposase domain of Metnase
Descriptor: Histone-lysine N-methyltransferase SETMAR
Authors:Goodwin, K.D, He, H, Imasaki, T, Lee, S.-H, Georgiadis, M.M.
Deposit date:2009-10-15
Release date:2010-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of the human Hsmar1-derived transposase domain in the DNA repair enzyme Metnase.
Biochemistry, 49, 2010

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