Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3N9N
DownloadVisualize
BU of 3n9n by Molmil
ceKDM7A from C.elegans, complex with H3K4me3K9me2 peptide and NOG
Descriptor: FE (II) ION, Histone H3 peptide, N-OXALYLGLYCINE, ...
Authors:Yang, Y, Hu, L, Wang, P, Hou, H, Chen, C.D, Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3N9O
DownloadVisualize
BU of 3n9o by Molmil
ceKDM7A from C.elegans, complex with H3K4me3 peptide, H3K9me2 peptide and NOG
Descriptor: FE (II) ION, Histone H3 peptide, N-OXALYLGLYCINE, ...
Authors:Yang, Y, Hu, L, Wang, P, Hou, H, Chen, C.D, Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.309 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3RBM
DownloadVisualize
BU of 3rbm by Molmil
Crystal structure of Plasmodium vivax geranylgeranylpyrophosphate synthase complexed with BPH -703
Descriptor: 3-(2,2-diphosphonoethyl)-1-dodecyl-1H-imidazol-3-ium, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
Authors:Liu, Y.L, No, J.H, Oldfield, E.
Deposit date:2011-03-29
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Lipophilic analogs of zoledronate and risedronate inhibit Plasmodium geranylgeranyl diphosphate synthase (GGPPS) and exhibit potent antimalarial activity.
Proc.Natl.Acad.Sci.USA, 109, 2012
3RYW
DownloadVisualize
BU of 3ryw by Molmil
Crystal structure of P. vivax geranylgeranyl diphosphate synthase complexed with BPH-811
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION, ...
Authors:No, J.H, Liu, Y.-L, Zhang, Y, Oldfield, E.
Deposit date:2011-05-11
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Lipophilic analogs of zoledronate and risedronate inhibit Plasmodium geranylgeranyl diphosphate synthase (GGPPS) and exhibit potent antimalarial activity.
Proc.Natl.Acad.Sci.USA, 109, 2012
2N7E
DownloadVisualize
BU of 2n7e by Molmil
Solution structure of the UBL domain of yeast Ddi1
Descriptor: DNA damage-inducible protein 1
Authors:Siva, M, Grantz Saskova, K, Veverka, V.
Deposit date:2015-09-09
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.
Sci Rep, 6, 2016
5V8U
DownloadVisualize
BU of 5v8u by Molmil
Small Molecule Inhibitor ABS-143 Bound to the Botulinum Neurotoxin Serotype A Light Chain
Descriptor: Botulinum neurotoxin type A, N-[3-(4-fluorophenyl)-4-methyl-1H-pyrazol-5-yl]-2-sulfanylacetamide, ZINC ION
Authors:Allen, K.N, Silvaggi, N.R.
Deposit date:2017-03-22
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Small molecule metalloprotease inhibitor with in vitro, ex vivo and in vivo efficacy against botulinum neurotoxin serotype A.
Toxicon, 137, 2017
4FGY
DownloadVisualize
BU of 4fgy by Molmil
Identification of a unique PPAR ligand with an unexpected binding mode and antibetic activity
Descriptor: (4R,6S,8S,12R,14R,16Z,18R,19R,20S,21S)-19,21-dihydroxy-22-{(2S,2'R,5S,5'S)-5'-[(1R)-1-hydroxyethyl]-2,5'-dimethyloctahydro-2,2'-bifuran-5-yl}-4,6,8,12,14,18,20-heptamethyl-9,11-dioxodocos-16-enoic acid, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Wang, R, Li, Y.
Deposit date:2012-06-05
Release date:2013-03-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Identification of the antibiotic ionomycin as an unexpected peroxisome proliferator-activated receptor Gamma (PPAR-gamma) ligand with a unique binding mode and effective glucose-lowering activity in a mouse model of diabetes.
Diabetologia, 56, 2013
3UE1
DownloadVisualize
BU of 3ue1 by Molmil
Crystal strucuture of Acinetobacter baumanni PBP1A in complex with MC-1
Descriptor: (4S,7Z)-7-(2-amino-1,3-thiazol-4-yl)-1-[({4-[(2R)-2,3-dihydroxypropyl]-3-(4,5-dihydroxypyridin-2-yl)-5-oxo-4,5-dihydro- 1H-1,2,4-triazol-1-yl}sulfonyl)amino]-4-formyl-10,10-dimethyl-1,6-dioxo-9-oxa-2,5,8-triazaundec-7-en-11-oate, Penicillin-binding protein 1a
Authors:Han, S.
Deposit date:2011-10-28
Release date:2011-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Distinctive attributes of beta-lactam target proteins in Acinetobacter baumannii relevant to development of new antibiotics
J.Am.Chem.Soc., 133, 2011
3UDI
DownloadVisualize
BU of 3udi by Molmil
Crystal structure of Acinetobacter baumannii PBP1a in complex with penicillin G
Descriptor: OPEN FORM - PENICILLIN G, Penicillin-binding protein 1a
Authors:Han, S.
Deposit date:2011-10-28
Release date:2011-12-14
Last modified:2013-06-26
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Distinctive attributes of beta-lactam target proteins in Acinetobacter baumannii relevant to development of new antibiotics
J.Am.Chem.Soc., 133, 2011
3UDF
DownloadVisualize
BU of 3udf by Molmil
Crystal structure of Apo PBP1a from Acinetobacter baumannii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Penicillin-binding protein 1a
Authors:Han, S.
Deposit date:2011-10-28
Release date:2011-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Distinctive attributes of beta-lactam target proteins in Acinetobacter baumannii relevant to development of new antibiotics
J.Am.Chem.Soc., 133, 2011
3VKD
DownloadVisualize
BU of 3vkd by Molmil
Crystal structure of MoeO5 soaked with 3-phosphoglycerate
Descriptor: (2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acid, MAGNESIUM ION, MoeO5, ...
Authors:Ren, F, Ko, T.-P, Huang, C.-H, Guo, R.-T.
Deposit date:2011-11-12
Release date:2012-05-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes
Angew.Chem.Int.Ed.Engl., 51, 2012
3VK5
DownloadVisualize
BU of 3vk5 by Molmil
Crystal structure of MoeO5 in complex with its product FPG
Descriptor: (2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acid, MAGNESIUM ION, MoeO5
Authors:Ren, F, Ko, T.-P, Huang, C.-H, Guo, R.-T.
Deposit date:2011-11-08
Release date:2012-05-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes
Angew.Chem.Int.Ed.Engl., 51, 2012
3VKC
DownloadVisualize
BU of 3vkc by Molmil
Crystal structure of MoeO5 soaked with pyrophosphate
Descriptor: (2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acid, MAGNESIUM ION, MoeO5, ...
Authors:Ren, F, Ko, T.-P, Huang, C.-H, Guo, R.-T.
Deposit date:2011-11-12
Release date:2012-05-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes
Angew.Chem.Int.Ed.Engl., 51, 2012
3VKB
DownloadVisualize
BU of 3vkb by Molmil
Crystal structure of MoeO5 soaked with FsPP overnight
Descriptor: CHLORIDE ION, MAGNESIUM ION, MoeO5, ...
Authors:Ren, F, Ko, T.-P, Huang, C.-H, Guo, R.-T.
Deposit date:2011-11-11
Release date:2012-05-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes
Angew.Chem.Int.Ed.Engl., 51, 2012
3UE3
DownloadVisualize
BU of 3ue3 by Molmil
Crystal structure of Acinetobacter baumanni PBP3
Descriptor: Septum formation, penicillin binding protein 3, peptidoglycan synthetase
Authors:Han, S.
Deposit date:2011-10-28
Release date:2011-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Distinctive attributes of beta-lactam target proteins in Acinetobacter baumannii relevant to development of new antibiotics
J.Am.Chem.Soc., 133, 2011
3UE0
DownloadVisualize
BU of 3ue0 by Molmil
Crystal structure of Acinetobacter baumannii PBP1a in complex with Aztreonam
Descriptor: 2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid, Penicillin-binding protein 1a
Authors:Han, S.
Deposit date:2011-10-28
Release date:2011-12-14
Last modified:2013-06-26
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Distinctive attributes of beta-lactam target proteins in Acinetobacter baumannii relevant to development of new antibiotics
J.Am.Chem.Soc., 133, 2011
3UDX
DownloadVisualize
BU of 3udx by Molmil
Crystal structure of Acinetobacter baumannii PBP1a in complex with Imipenem
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 1a
Authors:Han, S.
Deposit date:2011-10-28
Release date:2011-12-14
Last modified:2013-06-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Distinctive attributes of beta-lactam target proteins in Acinetobacter baumannii relevant to development of new antibiotics
J.Am.Chem.Soc., 133, 2011
4HOW
DownloadVisualize
BU of 4how by Molmil
The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5
Descriptor: CALCIUM ION, GLYCEROL, Sucrose isomerase
Authors:Xu, Z, Li, S, Xu, H, Zhou, J.
Deposit date:2012-10-22
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structural Basis of Erwinia rhapontici Isomaltulose Synthase
Plos One, 8, 2013
4HPH
DownloadVisualize
BU of 4hph by Molmil
The crystal structure of isomaltulose synthase mutant E295Q from Erwinia rhapontici NX5 in complex with its natural substrate sucrose
Descriptor: CALCIUM ION, GLYCEROL, Sucrose isomerase, ...
Authors:Xu, Z, Li, S, Xu, H, Zhou, J.
Deposit date:2012-10-23
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structural Basis of Erwinia rhapontici Isomaltulose Synthase
Plos One, 8, 2013
4HOZ
DownloadVisualize
BU of 4hoz by Molmil
The crystal structure of isomaltulose synthase mutant D241A from Erwinia rhapontici NX5 in complex with D-glucose
Descriptor: CALCIUM ION, GLYCEROL, Sucrose isomerase, ...
Authors:Xu, Z, Li, S, Xu, H, Zhou, J.
Deposit date:2012-10-23
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structural Basis of Erwinia rhapontici Isomaltulose Synthase
Plos One, 8, 2013
3VKA
DownloadVisualize
BU of 3vka by Molmil
Crystal structure of MoeO5 soaked for 3 hours in FsPP
Descriptor: (2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acid, MAGNESIUM ION, MoeO5
Authors:Ren, F, Ko, T.-P, Huang, C.-H, Guo, R.-T.
Deposit date:2011-11-11
Release date:2012-05-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes
Angew.Chem.Int.Ed.Engl., 51, 2012
8WC7
DownloadVisualize
BU of 8wc7 by Molmil
Cryo-EM structure of the ZH8667-bound mTAAR1-Gs complex
Descriptor: 2-[4-(3-fluorophenyl)phenyl]ethanamine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Rong, N.K, Guo, L.L, Zhang, M.H, Li, Q, Yang, F, Sun, J.P.
Deposit date:2023-09-11
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural and signaling mechanisms of TAAR1 enabled preferential agonist design.
Cell, 186, 2023
8WC3
DownloadVisualize
BU of 8wc3 by Molmil
Cryo-EM structure of the SEP363856-bound mTAAR1-Gs complex
Descriptor: 1-[(7~{S})-5,7-dihydro-4~{H}-thieno[2,3-c]pyran-7-yl]-~{N}-methyl-methanamine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Rong, N.K, Guo, L.L, Zhang, M.H, Li, Q, Yang, F, Sun, J.P.
Deposit date:2023-09-11
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural and signaling mechanisms of TAAR1 enabled preferential agonist design.
Cell, 186, 2023
8WC4
DownloadVisualize
BU of 8wc4 by Molmil
Cryo-EM structure of the ZH8651-bound mTAAR1-Gs complex
Descriptor: 2-(4-bromophenyl)ethanamine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Rong, N.K, Guo, L.L, Zhang, M.H, Li, Q, Yang, F, Sun, J.P.
Deposit date:2023-09-11
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural and signaling mechanisms of TAAR1 enabled preferential agonist design.
Cell, 186, 2023
8WC9
DownloadVisualize
BU of 8wc9 by Molmil
Cryo-EM structure of the ZH8651-bound mTAAR1-Gq complex
Descriptor: 2-(4-bromophenyl)ethanamine, Engineered G-alpha-q subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Rong, N.K, Guo, L.L, Zhang, M.H, Li, Q, Yang, F, Sun, J.P.
Deposit date:2023-09-11
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural and signaling mechanisms of TAAR1 enabled preferential agonist design.
Cell, 186, 2023

222926

건을2024-07-24부터공개중

PDB statisticsPDBj update infoContact PDBjnumon