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5B81
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BU of 5b81 by Molmil
Solution NMR structure of a 16-mer DNA duplex containing quadruple GC mismatches showing staggered base pairing, and consequent rescue of canonical double helical characteristics
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*AP*CP*GP*CP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*GP*CP*TP*AP*CP*GP*CP*G)-3')
Authors:De, M, Chatterjee, S.
Deposit date:2016-06-11
Release date:2016-06-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of a 16-mer DNA duplex containing quadruple GC mismatches showing staggered base pairing, and consequent rescue of canonical double helical characteristics
To Be Published
4YEC
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BU of 4yec by Molmil
Crystal structure of a clostripain (PARMER_00083) from Parabacteroides merdae ATCC 43184 in complex with peptide inhibitor Ac-VLTK-AOMK
Descriptor: Clostripain family, Peptide inhibitor Ac-VLTK-AOMK
Authors:Wolan, D.W, Gonzalez-Paez, G.E, Chatterjee, S.
Deposit date:2015-02-24
Release date:2016-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Substrate Profiling and High Resolution Co-complex Crystal Structure of a Secreted C11 Protease Conserved across Commensal Bacteria.
ACS Chem. Biol., 12, 2017
2MJX
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BU of 2mjx by Molmil
Solution NMR structure of a mismatch DNA
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*AP*CP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*CP*G)-3')
Authors:Ghosh, A, Kumar, K.R, Bhunia, A, Chatterjee, S.
Deposit date:2014-01-21
Release date:2014-03-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Double GC:GC mismatch in dsDNA enhances local dynamics retaining the DNA footprint: a high-resolution NMR study
Chemmedchem, 9, 2014
2L8Q
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BU of 2l8q by Molmil
Solution Structure of a control DNA Duplex
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*AP*GP*CP*AP*TP*GP*CP*G)-3')
Authors:Julien, O, Beadle, J.R, Magee, W.C, Chatterjee, S, Hostetler, K.Y, Evans, D.H, Sykes, B.D.
Deposit date:2011-01-22
Release date:2011-02-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of a DNA duplex containing the potent anti-poxvirus agent cidofovir.
J.Am.Chem.Soc., 133, 2011
2L8P
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BU of 2l8p by Molmil
Solution Structure of a DNA Duplex Containing the Potent Anti-Poxvirus Agent Cidofovir
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*GP*(L8P)P*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*AP*GP*CP*AP*TP*GP*CP*G)-3')
Authors:Julien, O, Beadle, J.R, Magee, W.C, Chatterjee, S, Hostetler, K.Y, Evans, D.H, Sykes, B.D.
Deposit date:2011-01-22
Release date:2011-02-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of a DNA duplex containing the potent anti-poxvirus agent cidofovir.
J.Am.Chem.Soc., 133, 2011
6CBA
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BU of 6cba by Molmil
Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and canavanine
Descriptor: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, L-CANAVANINE, ...
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2018-02-02
Release date:2019-02-06
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme.
Biochemistry, 2024
6CF3
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BU of 6cf3 by Molmil
Ethylene forming enzyme Y306A variant in complex with manganese and 2-oxoglutarate
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ...
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2018-02-13
Release date:2019-02-13
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme.
Biochemistry, 2024
5TJD
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BU of 5tjd by Molmil
Computer-based rational design of improved functionality for antibody catalysts toward organophosphorus compounds
Descriptor: FAB A.17 L47K mutant HEAVY CHAIN, FAB A.17 L47K mutant Light Chain
Authors:Chatziefthimiou, S, Stepanova, A, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2016-10-04
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 2020
6Y1L
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BU of 6y1l by Molmil
Crystal structure of the paraoxon-modified A.17 antibody FAB fragment - L47R mutant
Descriptor: DIETHYL PHOSPHONATE, FAB A.17 L47R mutant HEAVY CHAIN, FAB A.17 L47R mutant Light CHAIN, ...
Authors:Chatziefthimiou, S, Mokrushina, Y, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2020-02-12
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Y49
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BU of 6y49 by Molmil
Crystal structure of the paraoxon-modified A.17kappa antibody FAB fragment
Descriptor: A.17kappa antibody FAB fragment - Heavy Chain, A.17kappa antibody FAB fragment - Light Chain, DIETHYL PHOSPHONATE
Authors:Chatziefthimiou, S, Mokrushina, Y, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2020-02-19
Release date:2020-09-16
Last modified:2020-09-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Y1N
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BU of 6y1n by Molmil
Crystal structure of the phosphonate-modified A.5 antibody FAB fragment
Descriptor: 8-METHYL-8-AZABICYCLO[3.2.1]OCTAN-3-YL PHENYLPHOSPHONATE, FAB A.5 Heavy chain, FAB A.5 Light Chain
Authors:Chatziefthimiou, S, Mokrushina, Y, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2020-02-12
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Y1K
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BU of 6y1k by Molmil
Crystal structure of the unmodified A.17 antibody FAB fragment - L47R mutant
Descriptor: FAB A.17 L47R mutant Heavy Chain, FAB A.17 L47R mutant Light Chain
Authors:Chatziefthimiou, S, Stepanova, A, Mokrushina, Y, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2020-02-12
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Y1M
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BU of 6y1m by Molmil
Crystal structure of the paraoxon-modified A.17 antibody FAB fragment - L47K mutant
Descriptor: DIETHYL PHOSPHONATE, FAB A.17 L47K mutant HEAVY CHAIN, FAB A.17 L47K mutant Light CHAIN
Authors:Chatziefthimiou, S, Mokrushina, Y, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2020-02-12
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 117, 2020
5VJ2
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BU of 5vj2 by Molmil
Structure of human respiratory syncytial virus non-structural protein 1 (NS1)
Descriptor: 1,4-DIETHYLENE DIOXIDE, CHLORIDE ION, GLYCEROL, ...
Authors:Leung, D.W, Borek, D.M, Amarasinghe, G.K.
Deposit date:2017-04-18
Release date:2017-07-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses.
Nat Microbiol, 2, 2017
7AWK
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BU of 7awk by Molmil
Crystal structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955)
Descriptor: Probable endoribonuclease HigB1
Authors:Bigot, D.J, Guillet, V, Mourey, L.
Deposit date:2020-11-08
Release date:2021-11-24
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Substrate recognition and cryo-EM structure of the ribosome-bound TAC toxin of Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7Z0Y
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BU of 7z0y by Molmil
THSC20.HVTR04 Fab bound to SARS-CoV-2 Receptor Binding Domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Spike protein S1, ...
Authors:Wibmer, C.K.
Deposit date:2022-02-23
Release date:2022-04-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A combination of potently neutralizing monoclonal antibodies isolated from an Indian convalescent donor protects against the SARS-CoV-2 Delta variant.
Plos Pathog., 18, 2022
7Z0X
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BU of 7z0x by Molmil
THSC20.HVTR26 Fab bound to SARS-CoV-2 Receptor Binding Domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Spike protein S1, ...
Authors:Wibmer, C.K.
Deposit date:2022-02-23
Release date:2022-04-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A combination of potently neutralizing monoclonal antibodies isolated from an Indian convalescent donor protects against the SARS-CoV-2 Delta variant.
Plos Pathog., 18, 2022
8DHR
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BU of 8dhr by Molmil
An ester mutant of SfGFP
Descriptor: Green fluorescent protein
Authors:Reddi, R, Valiyaveetil, F.I.
Deposit date:2022-06-28
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A facile approach for incorporating tyrosine esters to probe ion-binding sites and backbone hydrogen bonds.
J.Biol.Chem., 300, 2023
8RZX
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BU of 8rzx by Molmil
Solution structure of a parallel stranded G-quadruplex formed in ORAI1 promoter
Descriptor: DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*GP*GP*CP*AP*CP*AP*GP*GP*TP*GP*GP*GP*CP*GP*GP*GP*G)-3')
Authors:Jana, J, Weisz, K.
Deposit date:2024-02-13
Release date:2024-08-21
Last modified:2024-09-11
Method:SOLUTION NMR
Cite:Remodeling Ca 2+ dynamics by targeting a promising E-box containing G-quadruplex at ORAI1 promoter in triple-negative breast cancer.
Cell Calcium, 123, 2024
7ELJ
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BU of 7elj by Molmil
Prion Derived Tetrapeptide Stabilizes Thermolabile Insulin via Conformational Trapping
Descriptor: IS1, Insulin A Chain, Insulin B chain
Authors:Banerjee, N.
Deposit date:2021-04-11
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Prion-derived tetrapeptide stabilizes thermolabile insulin via conformational trapping.
Iscience, 24, 2021
6JXD
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BU of 6jxd by Molmil
Human nucleosome core particle with cohesive end DNA termini
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:DeFalco, L, Davey, C.A.
Deposit date:2019-04-23
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019
6K1I
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BU of 6k1i by Molmil
Human nucleosome core particle with gammaH2A.X variant
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2AX, ...
Authors:Sharma, D, De Falco, L, Davey, C.A.
Deposit date:2019-05-10
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019
6K1K
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BU of 6k1k by Molmil
Human nucleosome core particle with H2A.X S139E variant
Descriptor: CHLORIDE ION, DNA (145-MER), Histone H2AX, ...
Authors:Sharma, D, De Falco, L, Davey, C.A.
Deposit date:2019-05-10
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019
6K1J
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BU of 6k1j by Molmil
Human nucleosome core particle with H2A.X variant
Descriptor: CHLORIDE ION, DNA (145-MER), Histone H2AX, ...
Authors:Sharma, D, De Falco, L, Davey, C.A.
Deposit date:2019-05-10
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019
6IPU
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BU of 6ipu by Molmil
Human nucleosome core particle containing 145 bp of DNA
Descriptor: CHLORIDE ION, DNA (145-MER), Histone H2A type 1-B/E, ...
Authors:DeFalco, L, Davey, C.A.
Deposit date:2018-11-04
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019

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