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2AF4
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BU of 2af4 by Molmil
Phosphotransacetylase from Methanosarcina thermophila co-crystallized with coenzyme A
Descriptor: COENZYME A, Phosphate acetyltransferase
Authors:Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
Deposit date:2005-07-25
Release date:2006-01-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006
2AF3
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BU of 2af3 by Molmil
Phosphotransacetylase from Methanosarcina thermophila soaked with Coenzyme A
Descriptor: COENZYME A, Phosphate acetyltransferase, SULFATE ION
Authors:Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
Deposit date:2005-07-25
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006
5L6I
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BU of 5l6i by Molmil
Uba1 in complex with Ub-MLN4924 covalent adduct
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2016-05-30
Release date:2017-06-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Dissecting the Specificity of Adenosyl Sulfamate Inhibitors Targeting the Ubiquitin-Activating Enzyme.
Structure, 25, 2017
5L6H
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BU of 5l6h by Molmil
Uba1 in complex with Ub-ABPA3 covalent adduct
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2016-05-30
Release date:2017-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dissecting the Specificity of Adenosyl Sulfamate Inhibitors Targeting the Ubiquitin-Activating Enzyme.
Structure, 25, 2017
5L6J
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BU of 5l6j by Molmil
Uba1 in complex with Ub-MLN7243 covalent adduct
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2016-05-30
Release date:2017-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Dissecting the Specificity of Adenosyl Sulfamate Inhibitors Targeting the Ubiquitin-Activating Enzyme.
Structure, 25, 2017
4MT6
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BU of 4mt6 by Molmil
Crystal structure of closed inactive collybistin
Descriptor: Rho guanine nucleotide exchange factor 9
Authors:Schneeberger, D, Schindelin, H.
Deposit date:2013-09-19
Release date:2014-08-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (5.501 Å)
Cite:A conformational switch in collybistin determines the differentiation of inhibitory postsynapses.
Embo J., 33, 2014
5AES
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BU of 5aes by Molmil
Crystal Structure of murine Chronophin (Pyridoxal Phosphate Phosphatase) in Complex with a PNP-derived Inhibitor
Descriptor: GLYCEROL, MAGNESIUM ION, PYRIDOXAL PHOSPHATE PHOSPHATASE, ...
Authors:Knobloch, G, Jabari, N, Koehn, M, Gohla, A, Schindelin, H.
Deposit date:2015-01-09
Release date:2015-04-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.751 Å)
Cite:Synthesis of Hydrolysis-Resistant Pyridoxal 5'-Phosphate Analogs and Their Biochemical and X-Ray Crystallographic Characterization with the Pyridoxal Phosphatase Chronophin.
Bioorg.Med.Chem., 23, 2015
6YK0
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BU of 6yk0 by Molmil
Crystal structure of mouse pyridoxal kinase in complex with ATP-gamma-S
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2020-04-05
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Pyridoxal kinase inhibition by artemisinins down-regulates inhibitory neurotransmission.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YJZ
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BU of 6yjz by Molmil
Crystal structure of mouse pyridoxal kinase in apo form
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Pyridoxal Kinase, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2020-04-05
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Pyridoxal kinase inhibition by artemisinins down-regulates inhibitory neurotransmission.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YK1
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BU of 6yk1 by Molmil
Crystal structure of mouse pyridoxal kinase in complex with ATP-gamma-S and artesunate
Descriptor: 1,2-ETHANEDIOL, Artesunate, GLYCEROL, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2020-04-05
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Pyridoxal kinase inhibition by artemisinins down-regulates inhibitory neurotransmission.
Proc.Natl.Acad.Sci.USA, 117, 2020
6ZQH
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BU of 6zqh by Molmil
Yeast Uba1 in complex with ubiquitin
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2020-07-09
Release date:2020-11-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.032 Å)
Cite:Development of ADPribosyl Ubiquitin Analogues to Study Enzymes Involved in Legionella Infection.
Chemistry, 27, 2021
3BII
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BU of 3bii by Molmil
Crystal Structure of Activated MPT Synthase
Descriptor: CHLORIDE ION, Molybdopterin-converting factor subunit 1, Molybdopterin-converting factor subunit 2
Authors:Daniels, J.N, Schindelin, H.
Deposit date:2007-11-30
Release date:2008-02-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a molybdopterin synthase-precursor Z complex: insight into its sulfur transfer mechanism and its role in molybdenum cofactor deficiency.
Biochemistry, 47, 2008
4TK2
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BU of 4tk2 by Molmil
Geph E in complex with a GABA receptor alpha3 subunit derived peptide in space group P61
Descriptor: Gamma-aminobutyric acid receptor subunit alpha-3, Gephyrin
Authors:Kasaragod, V.B, Maric, H.M, Schindelin, H.
Deposit date:2014-05-25
Release date:2014-12-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Molecular basis of the alternative recruitment of GABAA versus glycine receptors through gephyrin.
Nat Commun, 5, 2014
4TK1
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BU of 4tk1 by Molmil
Geph E in complex with a GABA receptor alpha3 subunit derived peptide in space group P21212
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, Gamma-aminobutyric acid receptor subunit alpha-3, ...
Authors:Kasaragod, V.B, Maric, H.M, Schindelin, H.
Deposit date:2014-05-25
Release date:2014-12-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of the alternative recruitment of GABAA versus glycine receptors through gephyrin.
Nat Commun, 5, 2014
4TK3
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BU of 4tk3 by Molmil
Geph E in complex with a GABA receptor alpha3 derived double mutant peptide in spacegroup P21212
Descriptor: Gamma-aminobutyric acid receptor subunit alpha-3, Gephyrin
Authors:Kasaragod, V.B, Maric, H.M, Schindelin, H.
Deposit date:2014-05-25
Release date:2014-12-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of the alternative recruitment of GABAA versus glycine receptors through gephyrin.
Nat Commun, 5, 2014
4U90
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BU of 4u90 by Molmil
GephE in complex with PEG crosslinked GABA receptor alpha3 subunit derived dimeric peptide
Descriptor: 1,1'-[ethane-1,2-diylbis(oxyethane-2,1-diyl)]bis(1H-pyrrole-2,5-dione), 1,4-BUTANEDIOL, Gamma-aminobutyric acid receptor subunit alpha-3, ...
Authors:Kasaragod, V.B, Maric, H.M, Schindelin, H.
Deposit date:2014-08-05
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of High-Affinity Dimeric Inhibitors Targeting the Interactions between Gephyrin and Inhibitory Neurotransmitter Receptors.
Angew.Chem.Int.Ed.Engl., 54, 2015
4U91
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BU of 4u91 by Molmil
GephE in complex with Para-Phenyl crosslinked Glycine receptor beta subunit derived dimeric peptide
Descriptor: 1,1'-benzene-1,4-diylbis(1H-pyrrole-2,5-dione), 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Kasaragod, V.B, Maric, H.M, Schindelin, H.
Deposit date:2014-08-05
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of High-Affinity Dimeric Inhibitors Targeting the Interactions between Gephyrin and Inhibitory Neurotransmitter Receptors.
Angew.Chem.Int.Ed.Engl., 54, 2015
3ESW
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BU of 3esw by Molmil
Complex of yeast PNGase with GlcNAc2-IAc.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, UV excision repair protein RAD23, ...
Authors:Zhao, G, Zhou, X, Lennarz, W.J, Schindelin, H.
Deposit date:2008-10-06
Release date:2008-11-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural and mutational studies on the importance of oligosaccharide binding for the activity of yeast PNGase.
Glycobiology, 19, 2009
3CMM
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BU of 3cmm by Molmil
Crystal Structure of the Uba1-Ubiquitin Complex
Descriptor: PROLINE, Ubiquitin, Ubiquitin-activating enzyme E1 1
Authors:Lee, I, Schindelin, H.
Deposit date:2008-03-23
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into E1-catalyzed ubiquitin activation and transfer to conjugating enzymes.
Cell(Cambridge,Mass.), 134, 2008
3M62
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BU of 3m62 by Molmil
Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Rad23
Descriptor: PENTAETHYLENE GLYCOL, POTASSIUM ION, UV excision repair protein RAD23, ...
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2010-03-15
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain.
J.Biol.Chem., 285, 2010
3M63
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BU of 3m63 by Molmil
Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Dsk2
Descriptor: PENTAETHYLENE GLYCOL, POTASSIUM ION, Ubiquitin conjugation factor E4, ...
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2010-03-15
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain.
J.Biol.Chem., 285, 2010
3GAE
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BU of 3gae by Molmil
Crystal Structure of PUL
Descriptor: CHLORIDE ION, GLYCEROL, Protein DOA1
Authors:Zhao, G, Schindelin, H, Lennarz, W.J.
Deposit date:2009-02-17
Release date:2009-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An Armadillo motif in Ufd3 interacts with Cdc48 and is involved in ubiquitin homeostasis and protein degradation
Proc.Natl.Acad.Sci.USA, 106, 2009
3IPO
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BU of 3ipo by Molmil
Crystal structure of YnjE
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, GLYCEROL, ...
Authors:Haenzelmann, P, Kuper, J, Schindelin, H.
Deposit date:2009-08-18
Release date:2009-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of YnjE from Escherichia coli, a sulfurtransferase with three rhodanese domains.
Protein Sci., 18, 2009
3IPP
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BU of 3ipp by Molmil
crystal structure of sulfur-free YnjE
Descriptor: GLYCEROL, PHOSPHATE ION, Putative thiosulfate sulfurtransferase ynjE, ...
Authors:Haenzelmann, P, Kuper, J, Schindelin, H.
Deposit date:2009-08-18
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of YnjE from Escherichia coli, a sulfurtransferase with three rhodanese domains.
Protein Sci., 18, 2009
6ZHT
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BU of 6zht by Molmil
Uba1-Ubc13 disulfide mediated complex
Descriptor: CHLORIDE ION, GLYCEROL, Ubiquitin-activating enzyme E1 1, ...
Authors:Schaefer, A, Misra, M, Schindelin, H.
Deposit date:2020-06-23
Release date:2022-01-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:ATP induced conformational changes facilitate E1-E2 disulfide bridging in the ubiquitin system.
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221051

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