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8R15
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BU of 8r15 by Molmil
Crystal structure of Fusarium oxysporum NADase I
Descriptor: GLYCEROL, TNT domain-containing protein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kallio, J.P, Ferrario, E, Stromland, O, Ziegler, M.
Deposit date:2023-11-01
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Evolution of fungal tuberculosis necrotizing toxin (TNT) domain-containing enzymes reveals divergent adaptations to enhance NAD cleavage.
Protein Sci., 33, 2024
8S09
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BU of 8s09 by Molmil
H. sapiens MCM2-7 double hexamer bound to double stranded DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (45-mer), ...
Authors:Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0C
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BU of 8s0c by Molmil
H. sapiens ORC1-5 bound to double stranded DNA as part of the MCM-ORC complex
Descriptor: DNA (26-mer), Isoform 2 of Origin recognition complex subunit 3, MAGNESIUM ION, ...
Authors:Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (4 Å)
Cite:MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0D
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BU of 8s0d by Molmil
H. sapiens MCM bound to double stranded DNA and ORC1-6
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (58-mer), DNA replication licensing factor MCM2, ...
Authors:Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0B
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BU of 8s0b by Molmil
H. sapiens MCM bound to double stranded DNA and ORC6 as part of the MCM-ORC complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (45-mer), DNA replication licensing factor MCM2, ...
Authors:Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0F
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BU of 8s0f by Molmil
H. sapiens OC1M bound to double stranded DNA
Descriptor: DNA (39-mer), DNA replication factor Cdt1, DNA replication licensing factor MCM2, ...
Authors:Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0E
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BU of 8s0e by Molmil
H. sapiens OCCM bound to double stranded DNA
Descriptor: Cell division control protein 6 homolog, DNA (39-mer), DNA replication factor Cdt1, ...
Authors:Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0A
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BU of 8s0a by Molmil
H. sapiens MCM2-7 hexamer bound to double stranded DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (22-mer), ...
Authors:Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8SP7
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BU of 8sp7 by Molmil
LINE-1 retrotransposon endonuclease domain complex with tranexamic acid
Descriptor: LINE-1 retrotransposon endonuclease, SULFATE ION, TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID
Authors:D'Ordine, A.M, Jogl, G, Sedivy, J.M.
Deposit date:2023-05-02
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Identification and characterization of small molecule inhibitors of the LINE-1 retrotransposon endonuclease.
Nat Commun, 15, 2024
2B0D
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BU of 2b0d by Molmil
EcoRV Restriction Endonuclease/GAATTC/Ca2+
Descriptor: 5'-D(*AP*AP*AP*GP*AP*AP*TP*TP*CP*TP*T)-3', CALCIUM ION, Type II restriction enzyme EcoRV
Authors:Hiller, D.A, Rodriguez, A.M, Perona, J.J.
Deposit date:2005-09-13
Release date:2005-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Non-cognate Enzyme-DNA Complex: Structural and Kinetic Analysis of EcoRV Endonuclease Bound to the EcoRI Recognition Site GAATTC
J.Mol.Biol., 354, 2005
2B0E
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BU of 2b0e by Molmil
EcoRV Restriction Endonuclease/GAAUTC/Ca2+
Descriptor: 5'-D(*AP*AP*AP*GP*AP*AP*(DU)P*TP*CP*TP*T)-3', CALCIUM ION, Type II restriction enzyme EcoRV
Authors:Hiller, D.A, Rodriguez, A.M, Perona, J.J.
Deposit date:2005-09-13
Release date:2005-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Non-cognate Enzyme-DNA Complex: Structural and Kinetic Analysis of EcoRV Endonuclease Bound to the EcoRI Recognition Site GAATTC
J.Mol.Biol., 354, 2005
1BUA
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BU of 1bua by Molmil
STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE
Descriptor: DNA (5'-D(*AP*AP*AP*GP*AP*CP*IP*TP*CP*TP*T)-3'), ENDONUCLEASE ECORV
Authors:Perona, J.J, Martin, A.M.
Deposit date:1998-09-03
Release date:1998-09-09
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and energetic origins of indirect readout in site-specific DNA cleavage by a restriction endonuclease.
Nat.Struct.Biol., 6, 1999
1BSU
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BU of 1bsu by Molmil
STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE
Descriptor: CALCIUM ION, DNA (5'-D(*AP*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3'), DNA (5'-D(P*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3'), ...
Authors:Perona, J.J, Martin, A.M.
Deposit date:1998-08-30
Release date:1998-09-09
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and energetic origins of indirect readout in site-specific DNA cleavage by a restriction endonuclease.
Nat.Struct.Biol., 6, 1999
8XWX
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BU of 8xwx by Molmil
Crystal structure of FIS1-BAP31 complex from human
Descriptor: B-cell receptor-associated protein 31, BETA-MERCAPTOETHANOL, Mitochondrial fission 1 protein, ...
Authors:Nguyen, M.D, Bong, S.M, Lee, B.I.
Deposit date:2024-01-17
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:A crystal structure containing FIS1 and BAP31 suggests the clue for FIS1-BAP31 interaction
To Be Published
7OS2
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BU of 7os2 by Molmil
Cryo-EM structure of Brr2 in complex with Jab1/MPN and C9ORF78
Descriptor: Pre-mRNA-processing-splicing factor 8, Telomere length and silencing protein 1 homolog, U5 small nuclear ribonucleoprotein 200 kDa helicase
Authors:Bergfort, A, Hilal, T, Weber, G, Wahl, M.C.
Deposit date:2021-06-07
Release date:2022-02-23
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:The intrinsically disordered TSSC4 protein acts as a helicase inhibitor, placeholder and multi-interaction coordinator during snRNP assembly and recycling.
Nucleic Acids Res., 50, 2022
7OS1
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BU of 7os1 by Molmil
Cryo-EM structure of Brr2 in complex with Fbp21
Descriptor: U5 small nuclear ribonucleoprotein 200 kDa helicase, WW domain-binding protein 4
Authors:Bergfort, A, Hilal, T, Weber, G, Wahl, M.C.
Deposit date:2021-06-07
Release date:2022-02-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The intrinsically disordered TSSC4 protein acts as a helicase inhibitor, placeholder and multi-interaction coordinator during snRNP assembly and recycling.
Nucleic Acids Res., 50, 2022
7PV9
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BU of 7pv9 by Molmil
Listeria monocytogene InlB (internalin B) residues 36-392 (internalin domain and B-repeat)
Descriptor: Internalin B
Authors:Geerds, C, Niemann, H.H.
Deposit date:2021-10-01
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A recurring packing contact in crystals of InlB pinpoints functional binding sites in the internalin domain and the B repeat.
Acta Crystallogr D Struct Biol, 78, 2022
7PPM
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BU of 7ppm by Molmil
SHP2 catalytic domain in complex with IRS1 (889-901) phosphopeptide (pSer-892, pTyr-896)
Descriptor: GLYCEROL, Insulin receptor substrate 1, Tyrosine-protein phosphatase non-receptor type 11,Tyrosine-protein phosphatase non-receptor type 11
Authors:Sok, P, Zeke, A, Remenyi, A.
Deposit date:2021-09-14
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling.
Nat Commun, 13, 2022
7PPN
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BU of 7ppn by Molmil
SHP2 catalytic domain in complex with CD28 (183-198) phosphopeptide (pTyr-191, p-Thr-195)
Descriptor: GLYCEROL, T-cell-specific surface glycoprotein CD28, Tyrosine-protein phosphatase non-receptor type 11,Tyrosine-protein phosphatase non-receptor type 11
Authors:Sok, P, Zeke, A, Remenyi, A.
Deposit date:2021-09-14
Release date:2022-09-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling.
Nat Commun, 13, 2022
7PPL
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BU of 7ppl by Molmil
SHP2 catalytic domain in complex with IRS1 (625-639) phosphopeptide (pTyr-632, pSer-636)
Descriptor: ETHANOL, GLYCEROL, Insulin receptor substrate 1, ...
Authors:Sok, P, Zeke, A, Remenyi, A.
Deposit date:2021-09-14
Release date:2022-09-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling.
Nat Commun, 13, 2022
9CE6
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BU of 9ce6 by Molmil
Key structural role for the conserved cis-proline of soybean serine hydroxymethyltransferase
Descriptor: Serine hydroxymethyltransferase
Authors:Beamer, L.J, Samarakoon, V.
Deposit date:2024-06-26
Release date:2024-10-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Key structural role of a conserved cis-proline revealed by the P285S variant of soybean serine hydroxymethyltransferase 8.
Biochem.J., 481, 2024
7ZFM
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BU of 7zfm by Molmil
Engineered Protein Targeting the Zika Viral Envelope Fusion Loop
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, HEXAETHYLENE GLYCOL, ...
Authors:Athayde, D, Archer, M, Viana, I.F.T, Adan, W.C.S, Xavier, L.S.S, Lins, R.D.
Deposit date:2022-04-01
Release date:2022-08-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.711 Å)
Cite:In Vitro Neutralisation of Zika Virus by an Engineered Protein Targeting the Viral Envelope Fusion Loop
SSRN, 2022
8BHD
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BU of 8bhd by Molmil
N-terminal domain of Plasmodium berghei glutamyl-tRNA synthetase (Tbxo4 derivative crystal structure)
Descriptor: GLYCEROL, Glutamate--tRNA ligase, SULFATE ION, ...
Authors:Benas, P, Jaramillo Ponce, J.R, Legrand, P, Frugier, M, Sauter, C.
Deposit date:2022-10-31
Release date:2023-01-25
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Solution X-ray scattering highlights discrepancies in Plasmodium multi-aminoacyl-tRNA synthetase complexes.
Protein Sci., 32, 2023
4GDO
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BU of 4gdo by Molmil
Structure of a fragment of the rod domain of plectin
Descriptor: Plectin
Authors:De Pereda, J.M, Buey, R.M, Uson, I, Sammito, M.D, De Marino, I.
Deposit date:2012-08-01
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Exploiting tertiary structure through local folds for crystallographic phasing.
Nat.Methods, 10, 2013
6GS3
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BU of 6gs3 by Molmil
Crystal Structure of the Uperin-3.5 peptide from Uperoleia mjobergii forming cross-alpha fibril
Descriptor: POTASSIUM ION, THIOCYANATE ION, Uperin-3.5
Authors:Landau, M, Tayeb-Fligelman, E, Uson, I.
Deposit date:2018-06-13
Release date:2019-06-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The amphibian antimicrobial peptide uperin 3.5 is a cross-alpha /cross-beta chameleon functional amyloid.
Proc.Natl.Acad.Sci.USA, 118, 2021

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