Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3SHU
DownloadVisualize
BU of 3shu by Molmil
Crystal structure of ZO-1 PDZ3
Descriptor: Tight junction protein ZO-1
Authors:Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M.
Deposit date:2011-06-17
Release date:2011-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core
To be Published
3SHW
DownloadVisualize
BU of 3shw by Molmil
Crystal structure of ZO-1 PDZ3-SH3-Guk supramodule complex with Connexin-45 peptide
Descriptor: Gap junction gamma-1 protein, Tight junction protein ZO-1
Authors:Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M.
Deposit date:2011-06-17
Release date:2011-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core
To be Published
5DI4
DownloadVisualize
BU of 5di4 by Molmil
Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at low pH
Descriptor: 5'-R(*GP*GP*GP*CP*GP*U)-D(P*C)-R(P*UP*GP*GP*GP*CP*AP*GP*UP*AP*CP*CP*CP*A)-3', MANGANESE (II) ION, RNA (48-MER)
Authors:Mir, A, Chen, J, Neau, D, Golden, B.L.
Deposit date:2015-08-31
Release date:2015-10-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.948 Å)
Cite:Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction.
Biochemistry, 54, 2015
5DI2
DownloadVisualize
BU of 5di2 by Molmil
Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at high pH
Descriptor: 5'-R(*GP*GP*GP*CP*GP*U)-D(P*C)-R(P*UP*GP*GP*GP*CP*AP*GP*UP*AP*CP*CP*CP*A)-3', MANGANESE (II) ION, RNA (48-MER)
Authors:Mir, A, Chen, J, Neau, D, Golden, B.L.
Deposit date:2015-08-31
Release date:2015-10-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.989 Å)
Cite:Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction.
Biochemistry, 54, 2015
5DH6
DownloadVisualize
BU of 5dh6 by Molmil
Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-G12A mutant in Mg2+
Descriptor: 5'-R(*GP*GP*GP*CP*GP*U)-D(P*C)-R(P*UP*GP*GP*GP*CP*AP*GP*UP*AP*CP*CP*CP*A)-3', MAGNESIUM ION, hammerhead ribozyme
Authors:Mir, A, Chen, J, Neau, D, Golden, B.L.
Deposit date:2015-08-29
Release date:2015-10-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.784 Å)
Cite:Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction.
Biochemistry, 54, 2015
3NAW
DownloadVisualize
BU of 3naw by Molmil
Crystal structure of E. coli O157:H7 effector protein NleL
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Lin, D.Y, Chen, J.
Deposit date:2010-06-02
Release date:2010-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biochemical and Structural Studies of a HECT-like Ubiquitin Ligase from Escherichia coli O157:H7.
J.Biol.Chem., 286, 2011
3NB2
DownloadVisualize
BU of 3nb2 by Molmil
Crystal structure of E. coli O157:H7 effector protein NleL
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Lin, D.Y, Chen, J.
Deposit date:2010-06-02
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and Structural Studies of a HECT-like Ubiquitin Ligase from Escherichia coli O157:H7.
J.Biol.Chem., 286, 2011
5DQK
DownloadVisualize
BU of 5dqk by Molmil
Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mg2+
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (48-MER), ...
Authors:Mir, A, Chen, J, Neau, D, Golden, B.L.
Deposit date:2015-09-14
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.707 Å)
Cite:Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction.
Biochemistry, 54, 2015
1ORS
DownloadVisualize
BU of 1ors by Molmil
X-ray structure of the KvAP potassium channel voltage sensor in complex with an Fab
Descriptor: 33H1 Fab heavy chain, 33H1 Fab light chain, potassium channel
Authors:Jiang, Y, Lee, A, Chen, J, Ruta, V, Cadene, M, Chait, B.T, MacKinnon, R.
Deposit date:2003-03-14
Release date:2003-05-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray structure of a voltage-dependent K+ channel
Nature, 423, 2003
4MQU
DownloadVisualize
BU of 4mqu by Molmil
Human GKRP complexed to AMG-3969 and S6P
Descriptor: 2-{4-[(2S)-4-[(6-aminopyridin-3-yl)sulfonyl]-2-(prop-1-yn-1-yl)piperazin-1-yl]phenyl}-1,1,1,3,3,3-hexafluoropropan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
Authors:St Jean, D.J, Ashton, K.S, Bartberger, M.D, Chen, J, Chmait, S, Cupples, R, Galbreath, E, Helmering, J, Jordan, S.R, Liu, L.
Deposit date:2013-09-16
Release date:2014-05-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Small molecule disruptors of the glucokinase-glucokinase regulatory protein interaction: 2. Leveraging structure-based drug design to identify analogues with improved pharmacokinetic profiles.
J.Med.Chem., 57, 2014
1ORQ
DownloadVisualize
BU of 1orq by Molmil
X-ray structure of a voltage-dependent potassium channel in complex with an Fab
Descriptor: 6E1 Fab heavy chain, 6E1 Fab light chain, CADMIUM ION, ...
Authors:Jiang, Y, Lee, A, Chen, J, Ruta, V, Cadene, M, Chait, B.T, MacKinnon, R.
Deposit date:2003-03-14
Release date:2003-05-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-ray structure of a voltage-dependent K+ channel
Nature, 423, 2003
4MRO
DownloadVisualize
BU of 4mro by Molmil
Human GKRP bound to AMG-5980 and S6P
Descriptor: 2-(4-{4-[(6-aminopyridin-3-yl)sulfonyl]piperazin-1-yl}phenyl)-1,1,1,3,3,3-hexafluoropropan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
Authors:St Jean, D.J, Ashton, K.S, Bartberger, M.D, Chen, J, Chmait, S, Cupples, R, Galbreath, E, Helmering, J, Jordan, S.R, Liu, L, Kunz, K, Michelsen, K, Nishimura, N, Pennington, L.D, Poon, S.F, Sivits, G, Stec, M.M, Tamayo, N, Van, G, Yang, K, Norman, M.H, Fotsch, C, LLoyd, D.J, Hale, C.
Deposit date:2013-09-17
Release date:2014-05-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Small molecule disruptors of the glucokinase-glucokinase regulatory protein interaction: 2. Leveraging structure-based drug design to identify analogues with improved pharmacokinetic profiles.
J.Med.Chem., 57, 2014
6L6W
DownloadVisualize
BU of 6l6w by Molmil
The structure of ScoE with intermediate
Descriptor: (3R)-3-[[(1R)-1,2-bis(oxidanyl)-2-oxidanylidene-ethyl]amino]butanoic acid, FE (II) ION, FORMIC ACID, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-10-29
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L6X
DownloadVisualize
BU of 6l6x by Molmil
The structure of ScoE with substrate
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, D(-)-TARTARIC ACID, FE (II) ION, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-10-29
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L86
DownloadVisualize
BU of 6l86 by Molmil
The structure of SfaA
Descriptor: (2S)-2-hydroxybutanedioic acid, D-MALATE, FE (II) ION, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-11-05
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
1RIM
DownloadVisualize
BU of 1rim by Molmil
E6-binding zinc finger (E6apc2)
Descriptor: E6apc2 peptide
Authors:Liu, Y, Liu, Z, Androphy, E, Chen, J, Baleja, J.D.
Deposit date:2003-11-17
Release date:2004-08-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Design and characterization of helical peptides that inhibit the E6 protein of papillomavirus.
Biochemistry, 43, 2004
1RIK
DownloadVisualize
BU of 1rik by Molmil
E6-binding zinc finger (E6apc1)
Descriptor: E6apc1 peptide
Authors:Liu, Y, Liu, Z, Androphy, E, Chen, J, Baleja, J.D.
Deposit date:2003-11-17
Release date:2004-08-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Design and characterization of helical peptides that inhibit the E6 protein of papillomavirus.
Biochemistry, 43, 2004
5UAK
DownloadVisualize
BU of 5uak by Molmil
Dephosphorylated, ATP-free human cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: Cystic fibrosis transmembrane conductance regulator
Authors:Liu, F, Zhang, Z, Chen, J.
Deposit date:2016-12-19
Release date:2017-01-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Molecular Structure of the Human CFTR Ion Channel.
Cell, 169, 2017
1RIJ
DownloadVisualize
BU of 1rij by Molmil
E6-bind Trp-cage (E6apn1)
Descriptor: E6apn1 peptide
Authors:Liu, Y, Liu, Z, Androphy, E, Chen, J, Baleja, J.D.
Deposit date:2003-11-17
Release date:2004-08-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Design and characterization of helical peptides that inhibit the E6 protein of papillomavirus.
Biochemistry, 43, 2004
5U1D
DownloadVisualize
BU of 5u1d by Molmil
Cryo-EM structure of the human TAP ATP-Binding Cassette Transporter
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, TAP transporter inhibitor ICP47
Authors:Oldham, M.L, Chen, J, Grigorieff, N.
Deposit date:2016-11-28
Release date:2017-01-11
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Structure of the transporter associated with antigen processing trapped by herpes simplex virus.
Elife, 5, 2016
5UAR
DownloadVisualize
BU of 5uar by Molmil
Dephosphorylated, ATP-free cystic fibrosis transmembrane conductance regulator (CFTR) from zebrafish
Descriptor: Cystic fibrosis transmembrane conductance regulator, DECANE
Authors:Zhang, Z, Chen, J.
Deposit date:2016-12-19
Release date:2017-01-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Atomic Structure of the Cystic Fibrosis Transmembrane Conductance Regulator.
Cell, 167, 2016
5UJ9
DownloadVisualize
BU of 5uj9 by Molmil
Cryo-EM structure of bovine multidrug resistance protein 1 (MRP1)
Descriptor: bovine multidrug resistance protein 1 (MRP1),Multidrug resistance-associated protein 1
Authors:Johnson, Z.L, Chen, J.
Deposit date:2017-01-17
Release date:2017-02-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structural Basis of Substrate Recognition by the Multidrug Resistance Protein MRP1.
Cell, 168, 2017
5UJA
DownloadVisualize
BU of 5uja by Molmil
Cryo-EM structure of bovine multidrug resistance protein 1 (MRP1) bound to leukotriene C4
Descriptor: (5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-3-( 2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid, bovine multidrug resistance protein 1 (MRP1),Multidrug resistance-associated protein 1
Authors:Johnson, Z.L, Chen, J.
Deposit date:2017-01-17
Release date:2017-02-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structural Basis of Substrate Recognition by the Multidrug Resistance Protein MRP1.
Cell, 168, 2017
3SQV
DownloadVisualize
BU of 3sqv by Molmil
Crystal Structure of E. coli O157:H7 E3 ubiquitin ligase, NleL, with a human E2, UbcH7
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin-conjugating enzyme E2 L3, ...
Authors:Lin, D.Y, Chen, J.
Deposit date:2011-07-06
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structures of two bacterial HECT-like E3 ligases in complex with a human E2 reveal atomic details of pathogen-host interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
6C06
DownloadVisualize
BU of 6c06 by Molmil
Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Darst, S.A, Campbell, E.A, Boyaci Selcuk, H, Chen, J, Lilic, M.
Deposit date:2017-12-27
Release date:2018-03-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.15 Å)
Cite:Fidaxomicin jamsMycobacterium tuberculosisRNA polymerase motions needed for initiation via RbpA contacts.
Elife, 7, 2018

220472

건을2024-05-29부터공개중

PDB statisticsPDBj update infoContact PDBjnumon