3A58
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![BU of 3a58 by Molmil](/molmil-images/mine/3a58) | Crystal structure of Sec3p - Rho1p complex from Saccharomyces cerevisiae | 分子名称: | Exocyst complex component SEC3, GTP-binding protein RHO1, MAGNESIUM ION, ... | 著者 | Yamashita, M, Sato, Y, Yamagata, A, Mimura, H, Yoshikawa, A, Fukai, S. | 登録日 | 2009-08-03 | 公開日 | 2010-01-12 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structural basis for the Rho- and phosphoinositide-dependent localization of the exocyst subunit Sec3 Nat.Struct.Mol.Biol., 17, 2010
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2Z6E
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![BU of 2z6e by Molmil](/molmil-images/mine/2z6e) | Crystal Structure of Human DAAM1 FH2 | 分子名称: | Disheveled-associated activator of morphogenesis 1 | 著者 | Yamashita, M, Higashi, T, Sato, Y, Shirakawa, R, Kita, T, Horiuchi, H, Fukai, S, Nureki, O. | 登録日 | 2007-07-31 | 公開日 | 2008-05-27 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of human DAAM1 formin homology 2 domain Genes Cells, 12, 2007
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5B86
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![BU of 5b86 by Molmil](/molmil-images/mine/5b86) | Crystal structure of M-Sec | 分子名称: | Tumor necrosis factor alpha-induced protein 2 | 著者 | Yamashita, M, Sato, Y, Yamagata, A, Fukai, S. | 登録日 | 2016-06-12 | 公開日 | 2016-10-12 | 最終更新日 | 2020-02-26 | 実験手法 | X-RAY DIFFRACTION (3.017 Å) | 主引用文献 | Distinct Roles for the N- and C-terminal Regions of M-Sec in Plasma Membrane Deformation during Tunneling Nanotube Formation. Sci Rep, 6, 2016
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3JSV
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![BU of 3jsv by Molmil](/molmil-images/mine/3jsv) | Crystal structure of mouse NEMO CoZi in complex with Lys63-linked di-ubiquitin | 分子名称: | NF-kappa-B essential modulator, Ubiquitin | 著者 | Yoshikawa, A, Sato, Y, Mimura, H, Yamashita, M, Yamagata, A, Fukai, S. | 登録日 | 2009-09-11 | 公開日 | 2009-10-27 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin Febs Lett., 583, 2009
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1UKJ
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![BU of 1ukj by Molmil](/molmil-images/mine/1ukj) | Detailed structure of L-Methionine-Lyase from Pseudomonas putida | 分子名称: | Methionine gamma-lyase, SULFATE ION | 著者 | Misaki, S, Takimoto, A, Takakura, T, Yoshioka, T, Yamashita, M, Tamura, T, Tanaka, H, Inagaki, K. | 登録日 | 2003-08-24 | 公開日 | 2004-10-19 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Detailed structure of L-Methionine -Lyase from Pseudomonas putida To be Published
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5H0Q
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![BU of 5h0q by Molmil](/molmil-images/mine/5h0q) | Crystal structure of lipid binding protein Nakanori at 1.5A | 分子名称: | Lipid binding protein | 著者 | Makino, A, Abe, M, Ishitsuka, R, Murate, M, Kishimoto, T, Sakai, S, Hullin-Matsuda, F, Shimada, Y, Inaba, T, Miyatake, H, Tanaka, H, Kurahashi, A, Pack, C.G, Kasai, R.S, Kubo, S, Schieber, N.L, Dohmae, N, Tochio, N, Hagiwara, K, Sasaki, Y, Aida, Y, Fujimori, F, Kigawa, T, Nishikori, K, Parton, R.G, Kusumi, A, Sako, Y, Anderluh, G, Yamashita, M, Kobayashi, T, Greimel, P, Kobayashi, T. | 登録日 | 2016-10-06 | 公開日 | 2016-10-19 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.501 Å) | 主引用文献 | A novel sphingomyelin/cholesterol domain-specific probe reveals the dynamics of the membrane domains during virus release and in Niemann-Pick type C FASEB J., 31, 2017
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2O7C
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![BU of 2o7c by Molmil](/molmil-images/mine/2o7c) | Crystal structure of L-methionine-lyase from Pseudomonas | 分子名称: | Methionine gamma-lyase, SULFATE ION | 著者 | Misaki, S, Takimoto, A, Takakura, T, Yoshioka, T, Yamashita, M, Tamura, T, Tanaka, H, Inagaki, K. | 登録日 | 2006-12-10 | 公開日 | 2007-12-11 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structure of the antitumour enzyme L-methionine gamma-lyase from Pseudomonas putida at 1.8 A resolution J.Biochem.(Tokyo), 141, 2007
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2ZNV
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![BU of 2znv by Molmil](/molmil-images/mine/2znv) | Crystal structure of human AMSH-LP DUB domain in complex with Lys63-linked ubiquitin dimer | 分子名称: | 1,2-ETHANEDIOL, AMSH-like protease, Ubiquitin, ... | 著者 | Sato, Y, Azusa, Y, Yamagata, A, Mimura, H, Wang, X, Yamashita, M, Ookata, K, Nureki, O, Iwai, K, Komada, M, Fukai, S. | 登録日 | 2008-05-01 | 公開日 | 2008-09-02 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains Nature, 455, 2008
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2ZCC
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![BU of 2zcc by Molmil](/molmil-images/mine/2zcc) | Ubiquitin crystallized under high pressure | 分子名称: | Ubiquitin, ZINC ION | 著者 | Kitahara, R, Tanaka, T, Yamashita, M, Araya, K, Yokoyama, S, Akasaka, K, Taniguchi, Y, Kato, M. | 登録日 | 2007-11-08 | 公開日 | 2007-11-20 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structure of Ubiquitin crystallized under high pressure to be published
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2ZNR
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![BU of 2znr by Molmil](/molmil-images/mine/2znr) | Crystal structure of the DUB domain of human AMSH-LP | 分子名称: | 1,2-ETHANEDIOL, AMSH-like protease, PRASEODYMIUM ION, ... | 著者 | Sato, Y, Azusa, Y, Yamagata, A, Mimura, H, Wang, X, Yamashita, M, Ookata, K, Nureki, O, Iwai, K, Komada, M, Fukai, S. | 登録日 | 2008-05-01 | 公開日 | 2008-09-02 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains Nature, 455, 2008
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3A9J
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![BU of 3a9j by Molmil](/molmil-images/mine/3a9j) | Crystal structure of the mouse TAB2-NZF in complex with Lys63-linked di-ubiquitin | 分子名称: | Mitogen-activated protein kinase kinase kinase 7-interacting protein 2, Ubiquitin, ZINC ION | 著者 | Sato, Y, Yoshikawa, A, Yamashita, M, Yamagata, A, Fukai, S. | 登録日 | 2009-10-29 | 公開日 | 2009-12-08 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (1.18 Å) | 主引用文献 | Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB3 Embo J., 28, 2009
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3A36
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![BU of 3a36 by Molmil](/molmil-images/mine/3a36) | Structural insight into the membrane insertion of tail-anchored proteins by Get3 | 分子名称: | ATPase GET3, ZINC ION | 著者 | Yamagata, A, Mimura, H, Sato, Y, Yamashita, M, Yoshikawa, A, Fukai, S. | 登録日 | 2009-06-10 | 公開日 | 2010-01-12 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Structural insight into the membrane insertion of tail-anchored proteins by Get3 Genes Cells, 15, 2010
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3A9K
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![BU of 3a9k by Molmil](/molmil-images/mine/3a9k) | Crystal structure of the mouse TAB3-NZF in complex with Lys63-linked di-ubiquitin | 分子名称: | Mitogen-activated protein kinase kinase kinase 7-interacting protein 3, Ubiquitin, ZINC ION | 著者 | Sato, Y, Yoshikawa, A, Yamashita, M, Yamagata, A, Fukai, S. | 登録日 | 2009-10-29 | 公開日 | 2009-12-08 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB3 Embo J., 28, 2009
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3A37
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![BU of 3a37 by Molmil](/molmil-images/mine/3a37) | Structural insight into the membrane insertion of tail-anchored proteins by Get3 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, ATPase GET3, ZINC ION | 著者 | Yamagata, A, Mimura, H, Sato, Y, Yamashita, M, Yoshikawa, A, Fukai, S. | 登録日 | 2009-06-10 | 公開日 | 2010-01-12 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structural insight into the membrane insertion of tail-anchored proteins by Get3 Genes Cells, 15, 2010
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3B08
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![BU of 3b08 by Molmil](/molmil-images/mine/3b08) | Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin | 分子名称: | Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, ZINC ION, ... | 著者 | Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S. | 登録日 | 2011-06-07 | 公開日 | 2011-12-14 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.701 Å) | 主引用文献 | Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex Proc.Natl.Acad.Sci.USA, 108, 2011
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3B0A
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![BU of 3b0a by Molmil](/molmil-images/mine/3b0a) | Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin | 分子名称: | Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, TRIS(HYDROXYETHYL)AMINOMETHANE, ... | 著者 | Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S. | 登録日 | 2011-06-07 | 公開日 | 2011-12-14 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex Proc.Natl.Acad.Sci.USA, 108, 2011
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3A1Q
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![BU of 3a1q by Molmil](/molmil-images/mine/3a1q) | Crystal structure of the mouse RAP80 UIMs in complex with Lys63-linked di-ubiquitin | 分子名称: | Ubiquitin, Ubiquitin interaction motif-containing protein 1 | 著者 | Sato, Y, Yoshikawa, A, Mimura, H, Yamashita, M, Yamagata, A, Fukai, S. | 登録日 | 2009-04-21 | 公開日 | 2009-07-21 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by tandem UIMs of RAP80 Embo J., 28, 2009
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8HPK
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![BU of 8hpk by Molmil](/molmil-images/mine/8hpk) | Crystal structure of the bacterial oxalate transporter OxlT in an oxalate-bound occluded form | 分子名称: | Fab fragment Heavy chein, Fab fragment Light chain, OXALATE ION, ... | 著者 | Shimamura, T, Hirai, T, Yamashita, A. | 登録日 | 2022-12-12 | 公開日 | 2023-02-15 | 最終更新日 | 2023-04-12 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota. Nat Commun, 14, 2023
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8HPJ
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6R5K
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![BU of 6r5k by Molmil](/molmil-images/mine/6r5k) | |
7CEH
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![BU of 7ceh by Molmil](/molmil-images/mine/7ceh) | Crystal structure of PET-degrading cutinase Cut190 S176A/S226P/R228S/ mutant with the C-terminal three residues deletion in ligand ejecting form | 分子名称: | Alpha/beta hydrolase family protein, CALCIUM ION | 著者 | Senga, A, Numoto, N, Ito, N, Kawai, F, Oda, M. | 登録日 | 2020-06-23 | 公開日 | 2020-08-26 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.09 Å) | 主引用文献 | Multiple structural states of Ca2+-regulated PET hydrolase, Cut190, and its correlation with activity and stability. J.Biochem., 169, 2021
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7CEF
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![BU of 7cef by Molmil](/molmil-images/mine/7cef) | Crystal structure of PET-degrading cutinase Cut190 /S226P/R228S/ mutant with the C-terminal three residues deletion | 分子名称: | Alpha/beta hydrolase family protein, CALCIUM ION, ZINC ION | 著者 | Senga, A, Numoto, N, Ito, N, Kawai, F, Oda, M. | 登録日 | 2020-06-23 | 公開日 | 2020-08-26 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Multiple structural states of Ca2+-regulated PET hydrolase, Cut190, and its correlation with activity and stability. J.Biochem., 169, 2021
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3A1R
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![BU of 3a1r by Molmil](/molmil-images/mine/3a1r) | |
3AWK
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![BU of 3awk by Molmil](/molmil-images/mine/3awk) | Crystal structure of the polyketide synthase 1 from huperzia serrata | 分子名称: | Chalcone synthase-like polyketide synthase, GLYCEROL, SULFATE ION | 著者 | Morita, H, Kondo, S, Kato, R, Sugio, S, Kohno, T, Abe, I. | 登録日 | 2011-03-23 | 公開日 | 2011-08-31 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Synthesis of unnatural alkaloid scaffolds by exploiting plant polyketide synthase. Proc.Natl.Acad.Sci.USA, 108, 2011
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3AWJ
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![BU of 3awj by Molmil](/molmil-images/mine/3awj) | Crystal structure of the Huperzia serrata polyketide synthase 1 complexed with CoA-SH | 分子名称: | COENZYME A, Chalcone synthase-like polyketide synthase, SULFATE ION | 著者 | Morita, H, Kondo, S, Kato, R, Sugio, S, Kohno, T, Abe, I. | 登録日 | 2011-03-23 | 公開日 | 2011-08-31 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Synthesis of unnatural alkaloid scaffolds by exploiting plant polyketide synthase. Proc.Natl.Acad.Sci.USA, 108, 2011
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