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7Y2P
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BU of 7y2p by Molmil
Crystal structure of CUG repeat RNA duplex containing A-U base pair and U-U mismatches
分子名称: RNA (5'-R(P*UP*UP*CP*UP*GP*CP*AP*GP*CP*UP*GP*AP*A)-3'), RNA (5'-R(P*UP*UP*CP*UP*GP*CP*UP*GP*CP*UP*GP*AP*A)-3')
著者Wang, S.C, Satange, R.B, Hou, M.H.
登録日2022-06-09
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural basis for water modulating RNA duplex formation in the CUG repeats of myotonic dystrophy type 1.
J.Biol.Chem., 299, 2023
7Y2B
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Crystal structure of CUG repeat RNA duplex containing U-U mismatches
分子名称: RNA (5'-R(P*UP*UP*CP*UP*GP*CP*UP*GP*CP*UP*GP*AP*A)-3')
著者Wang, S.C, Satange, R.B, Hou, M.H.
登録日2022-06-09
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural basis for water modulating RNA duplex formation in the CUG repeats of myotonic dystrophy type 1.
J.Biol.Chem., 299, 2023
7BPV
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BU of 7bpv by Molmil
r(GUGGGCCGAC)/d(GTCGGCCCAC) hybrid duplex structure
分子名称: DNA (5'-D(P*GP*TP*CP*GP*GP*CP*CP*CP*AP*C)-3'), RNA (5'-R(P*GP*UP*GP*GP*GP*CP*CP*GP*AP*C)-3'), SULFATE ION
著者Wang, S.C, Satange, R.B, Hou, M.H.
登録日2020-03-23
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.781 Å)
主引用文献Targeting the ALS/FTD-associated A-DNA kink with anthracene-based metal complex causes DNA backbone straightening and groove contraction.
Nucleic Acids Res., 49, 2021
1MFF
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BU of 1mff by Molmil
MACROPHAGE MIGRATION INHIBITORY FACTOR Y95F MUTANT
分子名称: MACROPHAGE MIGRATION INHIBITORY FACTOR
著者Taylor, A.B, Stamps, S.L, Wang, S.C, Hackert, M.L, Whitman, C.P.
登録日1998-10-19
公開日1999-07-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanism of the phenylpyruvate tautomerase activity of macrophage migration inhibitory factor: properties of the P1G, P1A, Y95F, and N97A mutants.
Biochemistry, 39, 2000
2GDG
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BU of 2gdg by Molmil
Crystal structure of covalently modified macrophage inhibitory factor
分子名称: Macrophage migration inhibitory factor
著者Golubkov, P.A, Hackert, M.L.
登録日2006-03-16
公開日2006-07-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Inactivation of the phenylpyruvate tautomerase activity of macrophage migration inhibitory factor by 2-oxo-4-phenyl-3-butynoate.
Bioorg.Chem., 34, 2006
8WQ7
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BU of 8wq7 by Molmil
Crystal structure of d(CGTATACG)2 with a four-carbon linker containing diacridine compound
分子名称: DNA (5'-D(P*CP*GP*TP*AP*TP*AP*CP*G)-3'), MANGANESE (II) ION, N,N'-di(acridin-9-yl)butane-1,4-diamine
著者Huang, S.C, Satange, R.B, Hou, M.H.
登録日2023-10-11
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Targeting DNA junction sites by bis-intercalators induces topological changes with potent antitumor effects.
Nucleic Acids Res., 2024
6L76
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Crystal structure of the Ni(II)(Chro)2-d(TTGGGCCGAA/TTCGGCCCAA) complex at 2.94 angstrom resolution
分子名称: (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
著者Hou, M.H, Jhan, C.R, Satange, R.B, Lin, S.M.
登録日2019-10-31
公開日2021-01-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Targeting the ALS/FTD-associated A-DNA kink with anthracene-based metal complex causes DNA backbone straightening and groove contraction.
Nucleic Acids Res., 49, 2021
8W7W
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BU of 8w7w by Molmil
Crystal structure of d(CGTATACG)2 with acridine complex
分子名称: DNA (5'-D(P*CP*GP*TP*AP*TP*AP*CP*G)-3'), MAGNESIUM ION, ~{N},~{N}'-di(acridin-9-yl)pentane-1,5-diamine
著者Huang, S.C, Satange, R.B, Hou, M.H.
登録日2023-08-31
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Targeting DNA junction sites by bis-intercalators induces topological changes with potent antitumor effects.
Nucleic Acids Res., 2024
1M07
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BU of 1m07 by Molmil
RESIDUES INVOLVED IN THE CATALYSIS AND BASE SPECIFICITY OF CYTOTOXIC RIBONUCLEASE FROM BULLFROG (RANA CATESBEIANA)
分子名称: 5'-D(*AP*CP*GP*A)-3', Ribonuclease
著者Leu, Y.-J, Chern, S.-S, Wang, S.-C, Hsiao, Y.-Y, Amiraslanov, I, Liaw, Y.-C, Liao, Y.-D.
登録日2002-06-12
公開日2003-01-21
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Residues involved in the catalysis, base specificity, and cytotoxicity of ribonuclease from Rana catesbeiana based upon mutagenesis and X-ray crystallography
J.Biol.Chem., 278, 2003
8W76
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BU of 8w76 by Molmil
Crystal structure of d(CGTATACG)2 duplex
分子名称: DNA (5'-D(P*CP*GP*TP*AP*TP*AP*CP*G)-3'), MANGANESE (II) ION
著者Satange, R.B, Peng, C.L, Hou, M.H.
登録日2023-08-30
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Targeting DNA junction sites by bis-intercalators induces topological changes with potent antitumor effects.
Nucleic Acids Res., 2024
8J89
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BU of 8j89 by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
分子名称: DNA topoisomerase 2
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-01
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.31 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8B
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BU of 8j8b by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
分子名称: DNA topoisomerase 2
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-01
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J87
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BU of 8j87 by Molmil
Asfv topoisomerase 2 - apo conformer Ia
分子名称: DNA topoisomerase 2
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-01
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8JA2
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BU of 8ja2 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+
分子名称: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Pang, A.H, Chang, C.-W, Tsai, M.-D.
登録日2023-05-05
公開日2024-02-07
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8C
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BU of 8j8c by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
分子名称: DNA topoisomerase 2
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-01
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9V
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BU of 8j9v by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), ...
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-05
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J88
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BU of 8j88 by Molmil
Asfv topoisomerase 2 - apo conformer Ib
分子名称: DNA topoisomerase 2
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-01
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9W
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BU of 8j9w by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*AP*AP*GP*AP*AP*CP*TP*CP*TP*GP*TP*AP*G)-3'), DNA (5'-D(*CP*AP*TP*GP*CP*TP*AP*CP*AP*GP*AP*GP*TP*TP*CP*TP*T)-3'), ...
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-05
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8A
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BU of 8j8a by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
分子名称: DNA topoisomerase 2
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-01
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9X
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BU of 8j9x by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
分子名称: DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), DNA topoisomerase 2, ...
著者Chang, C.-W, Tsai, M.-D.
登録日2023-05-05
公開日2024-02-07
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8JA1
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BU of 8ja1 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+ (oxidized form)
分子名称: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Chang, C.-W, Pang, A.H, Tsai, M.-D.
登録日2023-05-05
公開日2024-02-07
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
1KM8
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BU of 1km8 by Molmil
The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
分子名称: PHOSPHATE ION, RIBONUCLEASE, OOCYTES
著者Chern, S.-S, Musayev, F.N, Amiraslanov, I.R, Liao, Y.-D, Liaw, Y.-C.
登録日2001-12-14
公開日2003-09-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
To be Published
1KM9
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The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
分子名称: PHOSPHATE ION, RIBONUCLEASE, OOCYTES
著者Chern, S.-S, Musayev, F.N, Amiraslanov, I.R, Liao, Y.-D, Liaw, Y.-C.
登録日2001-12-14
公開日2003-09-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
To be Published
6L75
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BU of 6l75 by Molmil
Crystal structure of d(GTGGGCCGAC)2 DNA duplex
分子名称: DNA (5'-D(P*GP*TP*GP*GP*GP*CP*CP*GP*AP*C)-3')
著者Hou, M.H, Satange, R.B, Zeng, J.Y.
登録日2019-10-31
公開日2021-01-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.578 Å)
主引用文献Targeting the ALS/FTD-associated A-DNA kink with anthracene-based metal complex causes DNA backbone straightening and groove contraction.
Nucleic Acids Res., 49, 2021
1U7H
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BU of 1u7h by Molmil
Structure and a Proposed Mechanism for Ornithine Cyclodeaminase from Pseudomonas putida
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
著者Alam, S, Goodman, J.L, Wang, S, Ruzicka, F.J, Frey, P.A, Wedekind, J.E.
登録日2004-08-03
公開日2004-11-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Ornithine Cyclodeaminase: Structure, Mechanism of Action, and Implications for the u-Crystallin Family;
Biochemistry, 43, 2004

 

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