6OIG
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![BU of 6oig by Molmil](/molmil-images/mine/6oig) | Subunit joining exposes nascent pre-40S rRNA for processing and quality control | 分子名称: | 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... | 著者 | Rai, J, Parker, M.D, Ghalei, H, Johnson, M.C, Karbstein, K, Stroupe, M.E. | 登録日 | 2019-04-09 | 公開日 | 2020-09-30 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | 主引用文献 | An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7. Rna, 27, 2021
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6WDR
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![BU of 6wdr by Molmil](/molmil-images/mine/6wdr) | Subunit joining exposes nascent pre-40S rRNA for processing and quality control | 分子名称: | 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ... | 著者 | Rai, J, Parker, M.D, Huang, H, Choy, S, Ghalei, H, Johnson, M.C, Karbstein, K, Stroupe, M.E. | 登録日 | 2020-04-01 | 公開日 | 2020-09-30 | 最終更新日 | 2024-05-29 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7. Rna, 27, 2021
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6XN4
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![BU of 6xn4 by Molmil](/molmil-images/mine/6xn4) | Structure of the Lactococcus lactis Csm CTR_3:2 CRISPR-Cas Complex | 分子名称: | CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ... | 著者 | Rai, J, Sridhara, S, Li, H. | 登録日 | 2020-07-02 | 公開日 | 2022-01-12 | 最終更新日 | 2022-04-13 | 実験手法 | ELECTRON MICROSCOPY (3.35 Å) | 主引用文献 | Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex. Commun Biol, 5, 2022
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6XN5
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![BU of 6xn5 by Molmil](/molmil-images/mine/6xn5) | Structure of the Lactococcus lactis Csm Apo- CRISPR-Cas Complex | 分子名称: | CRISPR-associated protein Cas10, CRISPR-associated protein Csm3, CRISPR-associated protein Csm4, ... | 著者 | Rai, J, Sridhara, S, Li, H. | 登録日 | 2020-07-02 | 公開日 | 2022-01-12 | 最終更新日 | 2022-04-13 | 実験手法 | ELECTRON MICROSCOPY (2.97 Å) | 主引用文献 | Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex. Commun Biol, 5, 2022
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6XN3
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![BU of 6xn3 by Molmil](/molmil-images/mine/6xn3) | Structure of the Lactococcus lactis Csm CTR_4:3 CRISPR-Cas Complex | 分子名称: | CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ... | 著者 | Rai, J, Sridhara, S, Li, H. | 登録日 | 2020-07-02 | 公開日 | 2022-01-12 | 最終更新日 | 2022-04-13 | 実験手法 | ELECTRON MICROSCOPY (3 Å) | 主引用文献 | Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex. Commun Biol, 5, 2022
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6XN7
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![BU of 6xn7 by Molmil](/molmil-images/mine/6xn7) | Structure of the Lactococcus lactis Csm NTR CRISPR-Cas Complex | 分子名称: | CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ... | 著者 | Rai, J, Sridhara, S, Li, H. | 登録日 | 2020-07-02 | 公開日 | 2022-01-12 | 最終更新日 | 2022-04-13 | 実験手法 | ELECTRON MICROSCOPY (3.47 Å) | 主引用文献 | Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex. Commun Biol, 5, 2022
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7SUK
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![BU of 7suk by Molmil](/molmil-images/mine/7suk) | Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells | 分子名称: | 18S pre-rRNA, 40S ribosomal protein S11-A, 40S ribosomal protein S13, ... | 著者 | Rai, J, Zhao, Y, Li, H. | 登録日 | 2021-11-17 | 公開日 | 2022-07-06 | 最終更新日 | 2023-08-16 | 実験手法 | ELECTRON MICROSCOPY (3.99 Å) | 主引用文献 | Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome. Commun Biol, 5, 2022
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7MPJ
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![BU of 7mpj by Molmil](/molmil-images/mine/7mpj) | Stm1 bound vacant 80S structure isolated from wild-type | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Rai, J, Zhao, Y, Li, H. | 登録日 | 2021-05-04 | 公開日 | 2022-05-11 | 最終更新日 | 2023-12-13 | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | 主引用文献 | CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations. Structure, 30, 2022
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7MPI
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![BU of 7mpi by Molmil](/molmil-images/mine/7mpi) | Stm1 bound vacant 80S structure isolated from cbf5-D95A | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Rai, J, Zhao, Y, Li, H. | 登録日 | 2021-05-04 | 公開日 | 2022-05-11 | 最終更新日 | 2022-07-20 | 実験手法 | ELECTRON MICROSCOPY (3.05 Å) | 主引用文献 | CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations. Structure, 30, 2022
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7N8B
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![BU of 7n8b by Molmil](/molmil-images/mine/7n8b) | Cycloheximide bound vacant 80S structure isolated from cbf5-D95A | 分子名称: | 18S RIBOSOMAL RNA, 25S, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... | 著者 | Rai, J, Zhao, Y, Li, H. | 登録日 | 2021-06-14 | 公開日 | 2022-05-11 | 最終更新日 | 2022-07-20 | 実験手法 | ELECTRON MICROSCOPY (3.05 Å) | 主引用文献 | CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations. Structure, 30, 2022
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8D1V
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![BU of 8d1v by Molmil](/molmil-images/mine/8d1v) | Cryo-EM structure of guide RNA and target RNA bound Cas7-11 | 分子名称: | CRISPR RNA (34-MER), CRISPR-associated RAMP family protein, SS target RNA (5'-R(P*AP*GP*CP*UP*UP*GP*GP*UP*UP*CP*AP*AP*AP*GP*AP*AP*CP*G)-3'), ... | 著者 | Rai, J, Goswami, H, Li, H. | 登録日 | 2022-05-27 | 公開日 | 2022-11-02 | 最終更新日 | 2024-06-12 | 実験手法 | ELECTRON MICROSCOPY (2.82 Å) | 主引用文献 | Molecular mechanism of active Cas7-11 in processing CRISPR RNA and interfering target RNA. Elife, 11, 2022
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8D2P
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![BU of 8d2p by Molmil](/molmil-images/mine/8d2p) | Structure of Acidothermus cellulolyticus Cas9 ternary complex (Target bound) | 分子名称: | CRISPR-associated endonuclease, Csn1 family, DNA target strand (5'-D(P*CP*CP*AP*GP*GP*AP*TP*CP*TP*TP*GP*CP*CP*AP*TP*CP*CP*TP*AP*CP*CP*TP*CP*T)-3'), ... | 著者 | Rai, J, Das, A, Li, H. | 登録日 | 2022-05-30 | 公開日 | 2023-12-20 | 最終更新日 | 2024-05-01 | 実験手法 | ELECTRON MICROSCOPY (2.78 Å) | 主引用文献 | Coupled catalytic states and the role of metal coordination in Cas9. Nat Catal, 6, 2023
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8D2N
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![BU of 8d2n by Molmil](/molmil-images/mine/8d2n) | Structure of Acidothermus cellulolyticus Cas9 ternary complex (Pre-cleavage) | 分子名称: | CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ... | 著者 | Rai, J, Das, A, Li, H. | 登録日 | 2022-05-30 | 公開日 | 2023-12-20 | 最終更新日 | 2024-05-01 | 実験手法 | ELECTRON MICROSCOPY (2.88 Å) | 主引用文献 | Coupled catalytic states and the role of metal coordination in Cas9. Nat Catal, 6, 2023
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8D2K
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![BU of 8d2k by Molmil](/molmil-images/mine/8d2k) | Structure of Acidothermus cellulolyticus Cas9 ternary complex (Cleavage Intermediate 2) | 分子名称: | CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*GP*A)-3'), ... | 著者 | Rai, J, Das, A, Li, H. | 登録日 | 2022-05-30 | 公開日 | 2023-12-20 | 最終更新日 | 2024-05-01 | 実験手法 | ELECTRON MICROSCOPY (2.43 Å) | 主引用文献 | Coupled catalytic states and the role of metal coordination in Cas9. Nat Catal, 6, 2023
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8D2O
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![BU of 8d2o by Molmil](/molmil-images/mine/8d2o) | Structure of Acidothermus cellulolyticus Cas9 ternary complex (Post-cleavage 2) | 分子名称: | CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ... | 著者 | Rai, J, Das, A, Li, H. | 登録日 | 2022-05-30 | 公開日 | 2023-12-20 | 最終更新日 | 2024-05-01 | 実験手法 | ELECTRON MICROSCOPY (2.66 Å) | 主引用文献 | Coupled catalytic states and the role of metal coordination in Cas9. Nat Catal, 6, 2023
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8D2L
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![BU of 8d2l by Molmil](/molmil-images/mine/8d2l) | Structure of Acidothermus cellulolyticus Cas9 ternary complex (Cleavage Intermediate 1) | 分子名称: | CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*GP*A)-3'), ... | 著者 | Rai, J, Das, A, Li, H. | 登録日 | 2022-05-30 | 公開日 | 2023-12-20 | 最終更新日 | 2024-05-01 | 実験手法 | ELECTRON MICROSCOPY (2.21 Å) | 主引用文献 | Coupled catalytic states and the role of metal coordination in Cas9. Nat Catal, 6, 2023
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8D2Q
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![BU of 8d2q by Molmil](/molmil-images/mine/8d2q) | Structure of Acidothermus cellulolyticus Cas9 ternary complex (Post-cleavage 1) | 分子名称: | CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ... | 著者 | Rai, J, Das, A, Li, H. | 登録日 | 2022-05-30 | 公開日 | 2023-12-20 | 最終更新日 | 2024-05-01 | 実験手法 | ELECTRON MICROSCOPY (2.58 Å) | 主引用文献 | Coupled catalytic states and the role of metal coordination in Cas9. Nat Catal, 6, 2023
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8EVT
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![BU of 8evt by Molmil](/molmil-images/mine/8evt) | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-20 | 公開日 | 2023-09-06 | 最終更新日 | 2023-11-01 | 実験手法 | ELECTRON MICROSCOPY (2.2 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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8EVP
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![BU of 8evp by Molmil](/molmil-images/mine/8evp) | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-20 | 公開日 | 2023-09-06 | 実験手法 | ELECTRON MICROSCOPY (2.38 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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8EUB
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![BU of 8eub by Molmil](/molmil-images/mine/8eub) | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I | 分子名称: | 18S rRNA, 28S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-18 | 公開日 | 2023-09-06 | 実験手法 | ELECTRON MICROSCOPY (2.52 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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8EVR
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![BU of 8evr by Molmil](/molmil-images/mine/8evr) | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II | 分子名称: | (1S,3S,3aR,4S,4aR,7R,7aR,8aS)-8a-{[(6-deoxy-4-O-methyl-alpha-D-altropyranosyl)oxy]methyl}-4-formyl-7-methyl-3-(propan-2-yl)decahydro-1,4-methano-s-indacene-3a(1H)-carboxylate, 18S rRNA, 25S rRNA, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-20 | 公開日 | 2023-09-06 | 最終更新日 | 2023-11-01 | 実験手法 | ELECTRON MICROSCOPY (2.87 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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8EVQ
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![BU of 8evq by Molmil](/molmil-images/mine/8evq) | Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-20 | 公開日 | 2023-09-06 | 実験手法 | ELECTRON MICROSCOPY (2.72 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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8EVS
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![BU of 8evs by Molmil](/molmil-images/mine/8evs) | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-20 | 公開日 | 2023-09-06 | 最終更新日 | 2023-11-01 | 実験手法 | ELECTRON MICROSCOPY (2.62 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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8EWB
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![BU of 8ewb by Molmil](/molmil-images/mine/8ewb) | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-22 | 公開日 | 2023-09-06 | 実験手法 | ELECTRON MICROSCOPY (2.87 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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8EWC
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![BU of 8ewc by Molmil](/molmil-images/mine/8ewc) | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II | 分子名称: | 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... | 著者 | Zhao, Y, Rai, J, Li, H. | 登録日 | 2022-10-22 | 公開日 | 2023-09-06 | 実験手法 | ELECTRON MICROSCOPY (2.45 Å) | 主引用文献 | Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
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