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2GGF
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BU of 2ggf by Molmil
Solution structure of the MA3 domain of human Programmed cell death 4
分子名称: Programmed cell death 4, isoform 1
著者Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-24
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the MA3 domain of human Programmed cell death 4
To be Published
1IW7
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BU of 1iw7 by Molmil
Crystal structure of the RNA polymerase holoenzyme from Thermus thermophilus at 2.6A resolution
分子名称: LEAD (II) ION, MAGNESIUM ION, RNA polymerase alpha subunit, ...
著者RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-04-22
公開日2002-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution
NATURE, 417, 2002
6LR2
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BU of 6lr2 by Molmil
SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-2 CONTAINING PROTEIN 2
分子名称: YTH domain containing protein 2 (YTHDC2)
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2020-01-15
公開日2021-01-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-CONTAINING PROTEIN 2
TO BE PUBLISHED
7FBR
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BU of 7fbr by Molmil
Solution structure of The first RNA binding domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-12
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
7FBV
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BU of 7fbv by Molmil
The solution structure of the second RRM domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-13
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
1KOR
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BU of 1kor by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with inhibitors
分子名称: ARGININE, Argininosuccinate Synthetase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-12-22
公開日2002-04-03
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
3CQ3
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BU of 3cq3 by Molmil
Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
分子名称: GLYCEROL, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
著者Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Satoh, S, Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-02
公開日2009-04-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
To be Published
3CQ1
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BU of 3cq1 by Molmil
Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (TT1362) from Thermus Thermophilus HB8
分子名称: Putative uncharacterized protein TTHB138
著者Jeyakanthan, J, Satoh, S, Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-02
公開日2009-04-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (TT1362) from Thermus Thermophilus HB8
To be Published
1KN0
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Crystal Structure of the human Rad52 protein
分子名称: Rad52
著者Kagawa, W, Kurumizaka, H, Ishitani, R, Fukai, S, Nureki, O, Shibata, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-12-18
公開日2002-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of the homologous-pairing domain from the human Rad52 recombinase in the undecameric form.
Mol.Cell, 10, 2002
1L7Z
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Crystal structure of Ca2+/Calmodulin complexed with myristoylated CAP-23/NAP-22 peptide
分子名称: CALCIUM ION, CALMODULIN, CAP-23/NAP-22, ...
著者Matsubara, M, Nakatsu, T, Yamauchi, E, Kato, H, Taniguchi, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-18
公開日2003-09-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a myristoylated CAP-23/NAP-22 N-terminal domain complexed with Ca2+/calmodulin
EMBO J., 23, 2004
3JQM
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BU of 3jqm by Molmil
Binding of 5'-GTP to molybdenum cofactor biosynthesis protein MoaC from Thermus theromophilus HB8
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, DI(HYDROXYETHYL)ETHER, ...
著者Kanaujia, S.P, Jeyakanthan, J, Nakagawa, N, Sekar, K, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-09-07
公開日2010-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8
Acta Crystallogr.,Sect.D, 66, 2010
3JQJ
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Crystal structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from Thermus Theromophilus HB8
分子名称: GLYCEROL, Molybdenum cofactor biosynthesis protein C, PHOSPHATE ION, ...
著者Kanaujia, S.P, Jeyakanthan, J, Nakagawa, N, Sekar, K, Baba, S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-09-07
公開日2010-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8
Acta Crystallogr.,Sect.D, 66, 2010
3WND
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BU of 3wnd by Molmil
Crystal structure of EF-Pyl
分子名称: CITRIC ACID, Protein translation elongation factor 1A
著者Yanagisawa, T, Ishii, R, Fukunaga, R, Sengoku, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2013-12-08
公開日2014-12-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A SelB/EF-Tu/aIF2 gamma-like protein from Methanosarcina mazei in the GTP-bound form binds cysteinyl-tRNA(Cys.).
J. Struct. Funct. Genomics, 16, 2015
7CKJ
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BU of 7ckj by Molmil
Crystal structure of CMP kinase in complex with CMP from Thermus thermophilus HB8
分子名称: CYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase
著者Mega, R, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2020-07-17
公開日2020-07-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structures of Thermus thermophilus CMP kinase complexed with a phosphoryl group acceptor and donor.
PLoS ONE, 15, 2020
8KCQ
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BU of 8kcq by Molmil
Solution structures of the N-terminal divergent caplonin homology (NN-CH) domains of human intraflagellar transport protein 54
分子名称: TRAF3-interacting protein 1
著者Dang, W, Kuwasako, K, He, F, Takahashi, M, Tsuda, K, Nagata, T, Tanaka, A, Kobayashi, N, Kigawa, T, Guentert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2023-08-08
公開日2024-05-22
実験手法SOLUTION NMR
主引用文献1 H, 13 C, and 15 N resonance assignments and solution structure of the N-terminal divergent calponin homology (NN-CH) domain of human intraflagellar transport protein 54.
Biomol.Nmr Assign., 18, 2024
1UFM
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BU of 1ufm by Molmil
Solution structure of the PCI domain
分子名称: COP9 complex subunit 4
著者Suzuki, S, Hatanaka, H, Kigawa, T, Shirouzu, M, Hayashizaki, Y, The RIKEN Genome Exploration Research Group Phase I & II Teams, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-02
公開日2004-06-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the PCI domain
To be Published
7X9U
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BU of 7x9u by Molmil
Type-II KH motif of human mitochondrial RbfA
分子名称: Putative ribosome-binding factor A, mitochondrial
著者Kuwasako, K, Suzuki, S, Furue, M, Takizawa, M, Takahashi, M, Tsuda, K, Nagata, T, Watanabe, S, Tanaka, A, Kobayashi, N, Kigawa, T, Guntert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2022-03-16
公開日2023-01-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1 H, 13 C, and 15 N resonance assignments and solution structures of the KH domain of human ribosome binding factor A, mtRbfA, involved in mitochondrial ribosome biogenesis.
Biomol.Nmr Assign., 16, 2022
6JRQ
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BU of 6jrq by Molmil
Crystal structure of adenylosuccinate synthetase, PurA, from Thermus thermophilus
分子名称: 1,2-ETHANEDIOL, Adenylosuccinate synthetase, INOSINIC ACID
著者Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2019-04-05
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of adenylosuccinate synthetase, PurA, from Thermus thermophilus HB8
To Be Published
1UGJ
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BU of 1ugj by Molmil
Solution structure of a murine hypothetical protein from RIKEN cDNA 2310057J16
分子名称: RIKEN cDNA 2310057J16 protein
著者Nagashima, T, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-16
公開日2004-08-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of a murine hypothetical protein from RIKEN cDNA 2310057J16
To be Published
1B7F
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SXL-LETHAL PROTEIN/RNA COMPLEX
分子名称: PROTEIN (SXL-LETHAL PROTEIN), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3')
著者Handa, N, Nureki, O, Kurimoto, K, Kim, I, Sakamoto, H, Shimura, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-01-23
公開日1999-05-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein.
Nature, 398, 1999
1A8H
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METHIONYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS
分子名称: METHIONYL-TRNA SYNTHETASE, ZINC ION
著者Sugiura, I, Nureki, O, Ugaji, Y, Kuwabara, S, Lober, B, Giege, R, Moras, D, Yokoyama, S, Konno, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-03-26
公開日1999-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The 2.0 A crystal structure of Thermus thermophilus methionyl-tRNA synthetase reveals two RNA-binding modules.
Structure, 8, 2000
1B22
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RAD51 (N-TERMINAL DOMAIN)
分子名称: DNA REPAIR PROTEIN RAD51
著者Aihara, H, Ito, Y, Kurumizaka, H, Yokoyama, S, Shibata, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-12-04
公開日1999-12-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The N-terminal domain of the human Rad51 protein binds DNA: structure and a DNA binding surface as revealed by NMR.
J.Mol.Biol., 290, 1999
1UF9
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Crystal structure of TT1252 from Thermus thermophilus
分子名称: ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, TT1252 protein
著者Seto, A, Murayama, K, Toyama, M, Ebihara, A, Nakagawa, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-28
公開日2003-11-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献ATP-induced structural change of dephosphocoenzyme A kinase from Thermus thermophilus HB8
PROTEINS, 58, 2005
1AA9
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HUMAN C-HA-RAS(1-171)(DOT)GDP, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: C-HA-RAS, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Ito, Y, Yamasaki, Y, Muto, Y, Kawai, G, Nishimura, S, Miyazawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1997-01-27
公開日1997-07-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Regional polysterism in the GTP-bound form of the human c-Ha-Ras protein.
Biochemistry, 36, 1997
1AA3
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C-TERMINAL DOMAIN OF THE E. COLI RECA, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: RECA
著者Aihara, H, Ito, Y, Kurumizaka, H, Terada, T, Yokoyama, S, Shibata, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1997-01-22
公開日1997-07-23
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献An interaction between a specified surface of the C-terminal domain of RecA protein and double-stranded DNA for homologous pairing.
J.Mol.Biol., 274, 1997

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