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4ZTO
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BU of 4zto by Molmil
Fab/epitope complex structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region
分子名称: Epitope of rabbit monoclonal antibody R53, RABBIT MONOCLONAL ANTIBODY R53 FAB HEAVY CHAIN, RABBIT MONOCLONAL ANTIBODY R53 FAB LIGHT CHAIN
著者Pan, R, Kong, X.-P.
登録日2015-05-14
公開日2015-08-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analysis of a novel rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region critical for receptor and co-receptor binding.
Emerg Microbes Infect, 4, 2015
4ZTP
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BU of 4ztp by Molmil
Fab structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region
分子名称: Heavy chain of Fab fragment of rabbit monoclonal antibody R53, Light chain of Fab fragment of rabbit monoclonal antibody R53
著者Pan, R, Kong, X.-P.
登録日2015-05-14
公開日2015-08-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural analysis of a novel rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region critical for receptor and co-receptor binding.
Emerg Microbes Infect, 4, 2015
4YWG
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BU of 4ywg by Molmil
Crystal structure of 830A in complex with V1V2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of anti-HIV-1 gp120 V1V2 antibody 830A, Light chain of anti-HIV-1 gp120 V1V2 antibody 830A, ...
著者Pan, R, Kong, X.
登録日2015-03-20
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.998 Å)
主引用文献The V1V2 Region of HIV-1 gp120 Forms a Five-Stranded Beta Barrel.
J.Virol., 89, 2015
5V6M
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BU of 5v6m by Molmil
Crystal Structure of Rabbit Anti-HIV-1 gp120 V3 Fab 10A3 in complex with V3 peptide ConB
分子名称: CALCIUM ION, Envelope glycoprotein gp120 V3 peptide of Con B sequence, Heavy chain of Fab fragment of rabbit anti-HIV1 gp120 V3 mAb 10A3, ...
著者Pan, R, Kong, X.-P.
登録日2017-03-17
公開日2018-01-17
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Increased epitope complexity correlated with antibody affinity maturation and a novel binding mode revealed by structures of rabbit antibodies against the third variable loop (V3) of HIV-1 gp120.
J. Virol., 2018
5V6L
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BU of 5v6l by Molmil
Crystal Structure of Rabbit Anti-HIV-1 gp120 V3 Fab 10A37 in complex with V3 peptide JR-FL
分子名称: Envelope glycoprotein, v3 region, Heavy chain of Fab fragment of rabbit anti-HIV1 gp120 V3 mAb 10A37, ...
著者Pan, R, Kong, X.-P.
登録日2017-03-17
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.549 Å)
主引用文献Increased epitope complexity correlated with antibody affinity maturation and a novel binding mode revealed by structures of rabbit antibodies against the third variable loop (V3) of HIV-1 gp120.
J. Virol., 2018
6W2S
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BU of 6w2s by Molmil
Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1)
分子名称: 18S rRNA, CrPV 5'-UTR IRES, Eukaryotic translation initiation factor 3 subunit A, ...
著者Neupane, R, Pisareva, V, Rodriguez, C.F, Pisarev, A, Fernandez, I.S.
登録日2020-03-08
公開日2020-04-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献A complex IRES at the 5'-UTR of a viral mRNA assembles a functional 48S complex via an uAUG intermediate.
Elife, 9, 2020
6W2T
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BU of 6w2t by Molmil
Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the closed state (Class 2)
分子名称: 18S rRNA, CrPV 5'-UTR IRES, Eukaryotic translation initiation factor 3 subunit A, ...
著者Neupane, R, Pisareva, V, Rodriguez, C.F, Pisarev, A, Fernandez, I.S.
登録日2020-03-08
公開日2020-04-22
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献A complex IRES at the 5'-UTR of a viral mRNA assembles a functional 48S complex via an uAUG intermediate.
Elife, 9, 2020
1OPG
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BU of 1opg by Molmil
OPG2 FAB FRAGMENT
分子名称: OPG2 FAB (HEAVY CHAIN), OPG2 FAB (LIGHT CHAIN)
著者Kodandapani, R, Veerapandian, B, Ely, K.R.
登録日1995-04-28
公開日1995-07-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the OPG2 Fab. An antireceptor antibody that mimics an RGD cell adhesion site.
J.Biol.Chem., 270, 1995
1PUE
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BU of 1pue by Molmil
PU.1 ETS DOMAIN-DNA COMPLEX
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*GP*GP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*CP*CP*TP*TP*TP*T)-3'), PROTEIN (TRANSCRIPTION FACTOR PU.1 (TF PU.1))
著者Kodandapani, R, Pio, F, Ni, C.Z, Piccialli, G, Klemsz, M, McKercher, S, Maki, R.A, Ely, K.R.
登録日1996-07-08
公開日1997-02-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A new pattern for helix-turn-helix recognition revealed by the PU.1 ETS-domain-DNA complex.
Nature, 380, 1996
1BM3
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BU of 1bm3 by Molmil
IMMUNOGLOBULIN OPG2 FAB-PEPTIDE COMPLEX
分子名称: IMMUNOGLOBULIN OPG2 FAB, CONSTANT DOMAIN, VARIABLE DOMAIN
著者Kodandapani, R, Veerapandian, L, Ni, C.Z, Chiou, C.-K, Whital, R, Kunicki, T.J, Ely, K.R.
登録日1999-04-15
公開日1999-04-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational change in an anti-integrin antibody: structure of OPG2 Fab bound to a beta 3 peptide.
Biochem.Biophys.Res.Commun., 251, 1998
4LYM
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BU of 4lym by Molmil
CRYSTAL STRUCTURE OF LOW HUMIDITY TETRAGONAL LYSOZYME AT 2.1-ANGSTROMS RESOLUTION. VARIABILITY IN HYDRATION SHELL AND ITS STRUCTURAL CONSEQUENCES
分子名称: HEN EGG WHITE LYSOZYME
著者Kodandapani, R, Suresh, C.G, Vijayan, M.
登録日1990-07-30
公開日1991-10-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of low humidity tetragonal lysozyme at 2.1-A resolution. Variability in hydration shell and its structural consequences.
J.Biol.Chem., 265, 1990
8IU6
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BU of 8iu6 by Molmil
Crystal structure of peptidyl-tRNA hydrolase mutant from Enterococcus faecium
分子名称: GLYCEROL, Peptidyl-tRNA hydrolase
著者Pandey, R, Tripathi, S, Lanka, A.K, Zohib, M, Pal, R.K, Arora, A.
登録日2023-03-23
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of peptidyl-tRNA hydrolase mutant from Enterococcus faecium
To Be Published
7Y52
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BU of 7y52 by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Enterococcus faecium
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Peptidyl-tRNA hydrolase, ...
著者Pandey, R, Zohib, M, Mundra, S, Pal, R.K, Arora, A.
登録日2022-06-16
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal structure of peptidyl-tRNA hydrolase from Enterococcus faecium
To Be Published
6VU2
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BU of 6vu2 by Molmil
M1214_N1 Fab structure
分子名称: M1214 N1 Fab heavy chain, M1214 N1 Fab light chain
著者Pan, R, Kong, X.
登録日2020-02-14
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献VSV-Displayed HIV-1 Envelope Identifies Broadly Neutralizing Antibodies Class-Switched to IgG and IgA.
Cell Host Microbe, 27, 2020
4XML
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BU of 4xml by Molmil
Crystal structure of Fab of HIV-1 gp120 V3-specific human monoclonal antibody 2424
分子名称: Heavy chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424, Light chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424
著者Pan, R, Kong, X.-P.
登録日2015-01-14
公開日2015-07-08
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Functional and Structural Characterization of Human V3-Specific Monoclonal Antibody 2424 with Neutralizing Activity against HIV-1 JRFL.
J.Virol., 89, 2015
5UBZ
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BU of 5ubz by Molmil
Fab structure of HIV gp120 specific mAb 1E12
分子名称: Anti-HIV1 gp120 mAb 1E12 Fab heavy chain, Anti-HIV1 gp120 mAb 1E12 Fab light chain
著者Pan, R, Kong, X.-P.
登録日2016-12-21
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献High Antibody Diversity and Low Inter-clonal Competition Favor Production of Functional Neutralizing Antibodies
To be published
5UBY
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BU of 5uby by Molmil
Fab structure of anti-HIV-1 gp120 mAb 1A8
分子名称: Heavy chain of Fab fragment of anti-HIV1 gp120 mAb 1A8, Light chain of Fab fragment of anti-HIV1 gp120 mAb 1A8
著者Pan, R, Kong, X.-P.
登録日2016-12-21
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献High Antibody Diversity and Low Inter-clonal Competition Favor Production of Functional Neutralizing Antibodies
To be Published
6Y1E
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BU of 6y1e by Molmil
Crystal structure of human glutathione transferase P1-1 (hGSTP1-1) that was co-crystallised in the presence of indanyloxyacetic acid-94 (IAA-94)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[[6,7-bis(chloranyl)-2-cyclopentyl-2-methyl-1-oxidanylidene-3~{H}-inden-5-yl]oxy]ethanoic acid, GLUTATHIONE, ...
著者Pandian, R, Worth, R, Thangaraj, V, Sayed, Y, Dirr, H.W.
登録日2020-02-12
公開日2020-03-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献The interaction of IAA-94 with the soluble conformation of the CLIC1 protein and its structural homolog hGSTP1-1
To Be Published
8ALS
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BU of 8als by Molmil
The apo-crystal structure of a variant form of the 28-kDa Schistosoma haematobium glutathione transferase
分子名称: Glutathione S-transferase class-mu 28 kDa isozyme, SODIUM ION
著者Pandian, R, Makumbe, H.H, Sayed, Y, Achilonu, I.A.
登録日2022-08-01
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The apo-crystal structure of a variant form of the 28-kDa Schistosoma haematobium glutathione transferase
To Be Published
8AIH
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BU of 8aih by Molmil
Crystal Structure of Enterococcus faecium Nicotinate Nucleotide Adenylyltransferase at 1.9 Angstroms Resolution
分子名称: DIHYDROGENPHOSPHATE ION, Probable nicotinate-nucleotide adenylyltransferase, SULFATE ION
著者Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
登録日2022-07-26
公開日2023-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Obtaining high yield recombinant Enterococcus faecium nicotinate nucleotide adenylyltransferase for X-ray crystallography and biophysical studies.
Int.J.Biol.Macromol., 250, 2023
8AII
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BU of 8aii by Molmil
High Resolution Crystal Structure of Enterococcus faecium Nicotinate Nucleotide Adenylyltransferase Complexed with Adenine
分子名称: ADENINE, MAGNESIUM ION, Probable nicotinate-nucleotide adenylyltransferase, ...
著者Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
登録日2022-07-26
公開日2023-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Obtaining high yield recombinant Enterococcus faecium nicotinate nucleotide adenylyltransferase for X-ray crystallography and biophysical studies.
Int.J.Biol.Macromol., 250, 2023
8BHZ
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BU of 8bhz by Molmil
The apo-crystal structure of a variant form of the 28-kDa Schistosoma haematobium glutathione transferase in orthorhombic form
分子名称: Glutathione S-transferase class-mu 28 kDa isozyme
著者Pandian, R, Mfeka, S.M, Onisuru, O, Sayed, Y, Achilonu, I.A.
登録日2022-11-01
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Biophysical and biochemical characterization of 28-kDa glutathione transferase from Schistosoma haematobium
To Be Published
9FYB
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BU of 9fyb by Molmil
Structural Insights into the NMN Complex of Nicotinate Nucleotide Adenylyltransferase from Enterococcus faecium via Co-Crystallization Studies
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
著者Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
登録日2024-07-03
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural Insights into the NMN Complex of Nicotinate Nucleotide Adenylyltransferase from Enterococcus faecium via Co-Crystallization Studies
To be published
6CEZ
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BU of 6cez by Molmil
Crystal Structure of Rabbit Anti-HIV-1 gp120 V2 Fab 16C2 in complex with V2 peptide ConB
分子名称: HIV-1 gp120 V2 Peptide Con B, Heavy chain of Fab fragment of rabbit anti-HIV1 gp120 V2 mAb 16C2, Light chain of Fab fragment of rabbit anti-HIV1 gp120 V2 mAb 16C2
著者Kong, X, Pan, R.
登録日2018-02-13
公開日2018-09-12
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Select gp120 V2 domain specific antibodies derived from HIV and SIV infection and vaccination inhibit gp120 binding to alpha 4 beta 7.
PLoS Pathog., 14, 2018
6W73
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Fab Structure of CD4 Binding Site (CD4bs) Huamn Monoclonal Antibody HmAb64
分子名称: CALCIUM ION, HmAb64 fab heavy chain, HmAb64 fab light chain
著者Kong, X, Pan, R.
登録日2020-03-18
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A CD4 Binding Site (CD4bs) Monoclonal Antibody Elicited from A Human Volunteer Immunized by a DNA Prime/Protein Boost gp120 HIV Vaccine
To Be Published

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件を2024-07-17に公開中

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