Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8YHR
DownloadVisualize
BU of 8yhr by Molmil
DHODH in complex with furocoumavirin
分子名称: 4-methyl-8-[(S)-oxidanyl(phenyl)methyl]-9-phenyl-furo[2,3-h]chromen-2-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
著者Hara, K, Okumura, H, Nakahara, M, Sato, M, Hashimoto, H, Osada, H, Watanabe, K.
登録日2024-02-28
公開日2024-05-22
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Functional Analyses of Inhibition of Human Dihydroorotate Dehydrogenase by Antiviral Furocoumavirin.
Biochemistry, 63, 2024
3U0V
DownloadVisualize
BU of 3u0v by Molmil
Crystal Structure Analysis of human LYPLAL1
分子名称: Lysophospholipase-like protein 1
著者Burger, M, Zimmermann, T.J, Kondoh, Y, Stege, P, Watanabe, N, Osada, H, Waldmann, H, Vetter, I.R.
登録日2011-09-29
公開日2011-11-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal structure of the predicted phospholipase LYPLAL1 reveals unexpected functional plasticity despite close relationship to acyl protein thioesterases
J.Lipid Res., 53, 2012
6N5V
DownloadVisualize
BU of 6n5v by Molmil
Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
分子名称: 2-(1H-indol-4-yl)ethan-1-amine, Strictosidine synthase
著者Cai, Y, Shao, N, Xie, H, Futamura, Y, Panjikar, S, Liu, H, Zhu, H, Osada, H, Zou, H.
登録日2018-11-22
公開日2019-11-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.549 Å)
主引用文献Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
to be published
7T5J
DownloadVisualize
BU of 7t5j by Molmil
Crystal Structure of Strictosidine Synthase in complex with S-IPA (2-(1H-indol-3-yl) propan-1-amine)
分子名称: (2S)-2-(1H-indol-3-yl)propan-1-amine, Strictosidine synthase
著者Liu, H, Panjikar, S, Futamura, Y, Shao, N, Osada, H, Zou, H.
登録日2021-12-12
公開日2022-12-14
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献beta-Branched Tryptamine Provoked Non Sandwich-Like-Mode Catalysis of Strictosidine Synthase to Antimalarial Indole Alkaloids
to be published
7T5I
DownloadVisualize
BU of 7t5i by Molmil
Crystal Structure of Strictosidine Synthase in complex with R-IPA(2-(1H-indol-3-yl) propan-1-amine)
分子名称: (2R)-2-(1H-indol-3-yl)propan-1-amine, Strictosidine synthase
著者Liu, H, Panjikar, S, Futamura, Y, Shao, N, Osada, H, Zou, H.
登録日2021-12-12
公開日2022-12-14
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Beta-Branched Tryptamine Provoked Non Sandwich-Like-Mode Catalysis of Strictosidine Synthase to Antimalarial Indole Alkaloids
to be published
6KOG
DownloadVisualize
BU of 6kog by Molmil
Ketosynthase domain in tenuazonic acid synthetase 1 (TAS1).
分子名称: GLYCEROL, Hybrid PKS-NRPS synthetase TAS1, SULFATE ION
著者Yun, C.S, Nishimoto, K, Motoyama, T, Hino, T, Nagano, S, Osada, H.
登録日2019-08-10
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Unique features of the ketosynthase domain in a nonribosomal peptide synthetase-polyketide synthase hybrid enzyme, tenuazonic acid synthetase 1.
J.Biol.Chem., 295, 2020
5IH5
DownloadVisualize
BU of 5ih5 by Molmil
Human Casein Kinase 1 isoform delta (kinase domain) in complex with Epiblastin A
分子名称: 6-(3-chlorophenyl)pteridine-2,4,7-triamine, Casein kinase I isoform delta, S,R MESO-TARTARIC ACID, ...
著者Ursu, A, Illich, D.J, Takemoto, Y, Porfetye, A.T, Zhang, M, Brockmeyer, A, Janning, P, Watanabe, N, Osada, H, Vetter, I.R, Ziegler, S, Schoeler, H.R, Waldmann, H.
登録日2016-02-29
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Epiblastin A Induces Reprogramming of Epiblast Stem Cells Into Embryonic Stem Cells by Inhibition of Casein Kinase 1.
Cell Chem Biol, 23, 2016
5IH4
DownloadVisualize
BU of 5ih4 by Molmil
Human Casein Kinase 1 isoform delta apo (kinase domain)
分子名称: Casein kinase I isoform delta, S,R MESO-TARTARIC ACID, SULFATE ION, ...
著者Ursu, A, Illich, D.J, Takemoto, Y, Porfetye, A.T, Zhang, M, Brockmeyer, A, Janning, P, Watanabe, N, Osada, H, Vetter, I.R, Ziegler, S, Schoeler, H.R, Waldmann, H.
登録日2016-02-29
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Epiblastin A Induces Reprogramming of Epiblast Stem Cells Into Embryonic Stem Cells by Inhibition of Casein Kinase 1.
Cell Chem Biol, 23, 2016
5IH6
DownloadVisualize
BU of 5ih6 by Molmil
Human Casein Kinase 1 isoform delta (kinase domain) in complex with Epiblastin A derivative
分子名称: 6-(3-bromophenyl)pteridine-2,4,7-triamine, Casein kinase I isoform delta, S,R MESO-TARTARIC ACID, ...
著者Ursu, A, Illich, D.J, Takemoto, Y, Porfetye, A.T, Zhang, M, Brockmeyer, A, Janning, P, Watanabe, N, Osada, H, Vetter, I.R, Ziegler, S, Schoeler, H.R, Waldmann, H.
登録日2016-02-29
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Epiblastin A Induces Reprogramming of Epiblast Stem Cells Into Embryonic Stem Cells by Inhibition of Casein Kinase 1.
Cell Chem Biol, 23, 2016
3VNQ
DownloadVisualize
BU of 3vnq by Molmil
Co-crystal structure of NRPS adenylation protein CytC1 with ATP from streptomyces
分子名称: ADENOSINE-5'-TRIPHOSPHATE, NRPS adenylation protein CytC1
著者Okumura, H, Ueki, M, Shiro, Y, Osada, H.
登録日2012-01-17
公開日2013-01-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate recognition mechanism of NRPS adenylation protein from Streptomyces
To be Published
3VNR
DownloadVisualize
BU of 3vnr by Molmil
Co-crystal structure of NRPS adenylation protein CytC1 with aminobutyric acid and AMP from streptomyces
分子名称: ADENOSINE MONOPHOSPHATE, ALPHA-AMINOBUTYRIC ACID, NRPS adenylation protein CytC1
著者Okumura, H, Ueki, M, Shiro, Y, Osada, H.
登録日2012-01-17
公開日2013-01-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Substrate recognition mechanism of NRPS adenylation protein from Streptomyces
To be Published
3VNS
DownloadVisualize
BU of 3vns by Molmil
Co-crystal structure of NRPS adenylation protein CytC1 with D-valine and AMP from streptomyces
分子名称: ADENOSINE MONOPHOSPHATE, D-VALINE, NRPS adenylation protein CytC1
著者Okumura, H, Ueki, M, Shiro, Y, Osada, H.
登録日2012-01-17
公開日2013-01-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Substrate recognition mechanism of NRPS adenylation protein from Streptomyces
to be published
2ZA0
DownloadVisualize
BU of 2za0 by Molmil
Crystal structure of mouse glyoxalase I complexed with methyl-gerfelin
分子名称: Glyoxalase I, ZINC ION, methyl 4-(2,3-dihydroxy-5-methylphenoxy)-2-hydroxy-6-methylbenzoate
著者Okumura, H, Kawatani, M, Osada, H.
登録日2007-09-26
公開日2008-08-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The identification of an osteoclastogenesis inhibitor through the inhibition of glyoxalase I
Proc.Natl.Acad.Sci.Usa, 105, 2008
3ACL
DownloadVisualize
BU of 3acl by Molmil
Crystal Structure of Human Pirin in complex with Triphenyl Compound
分子名称: FE (II) ION, N-{[4-(benzyloxy)phenyl](methyl)-lambda~4~-sulfanylidene}-4-methylbenzenesulfonamide, Pirin
著者Okumura, H, Miyazaki, I, Simizu, S, Osada, H.
登録日2010-01-05
公開日2010-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A small-molecule inhibitor shows that pirin regulates migration of melanoma cells
Nat.Chem.Biol., 6, 2010
2ZHP
DownloadVisualize
BU of 2zhp by Molmil
Crystal structure of bleomycin-binding protein from Streptoalloteichus hindustanus complexed with bleomycin derivative
分子名称: Bleomycin resistance protein, CHLORIDE ION, COPPER (II) ION, ...
著者Okumura, H, Miyazaki, I, Simizu, S, Osada, H.
登録日2008-02-06
公開日2009-02-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Affinity Relationship Study of Bleomycins and Shble protein Using a Chemical Array
To be Published
5INI
DownloadVisualize
BU of 5ini by Molmil
Structural basis for acyl-CoA carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics
分子名称: HEXANOYL-COENZYME A, Putative carboxyl transferase
著者Valentic, T.R, Ray, L, Miyazawa, T, Withall, D.M, Song, L, Milligan, J.C, Osada, H, Tsai, S.C, Challis, G.L.
登録日2016-03-07
公開日2016-12-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units.
Nat Commun, 7, 2016
5ING
DownloadVisualize
BU of 5ing by Molmil
A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender unit
分子名称: Putative carboxyl transferase
著者Valentic, T.R, Ray, L, Miyazawa, T, Song, L, Withall, D.M, Milligan, J.C, Takahashi, S, Osada, H, Tsai, S.C, Challis, G.L.
登録日2016-03-07
公開日2016-12-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units.
Nat Commun, 7, 2016
3WVS
DownloadVisualize
BU of 3wvs by Molmil
Crystal Structure of Cytochrome P450revI
分子名称: (2E,4S,5S,6E,8E)-10-{(2R,3S,6S,8R,9S)-9-butyl-8-[(1E,3E)-4-carboxy-3-methylbuta-1,3-dien-1-yl]-3-methyl-1,7-dioxaspiro[5.5]undec-2-yl}-5-hydroxy-4,8-dimethyldeca-2,6,8-trienoic acid, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Nagano, S, Takahashi, S, Osada, H, Shiro, Y.
登録日2014-06-06
公開日2014-10-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-function analyses of cytochrome P450revI involved in reveromycin A biosynthesis and evaluation of the biological activity of its substrate, reveromycin T.
J.Biol.Chem., 289, 2014
5INF
DownloadVisualize
BU of 5inf by Molmil
Structural basis for acyl-CoA carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics
分子名称: Carboxyl transferase, HEXANOYL-COENZYME A
著者Valentic, T.R, Ray, L, Miyazawa, T, Withall, D.M, Song, L, Osada, H, Tsai, S.C, Challis, G.L.
登録日2016-03-07
公開日2016-12-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units.
Nat Commun, 7, 2016
4V1D
DownloadVisualize
BU of 4v1d by Molmil
Ternary complex among two human derived single chain antibody fragments and Cn2 toxin from scorpion Centruroides noxius.
分子名称: BETA-MAMMAL TOXIN CN2, SINGLE CHAIN ANTIBODY FRAGMENT LR, HEAVY CHAIN, ...
著者Riano-Umbarila, L, Serrano-Posada, H, Rojas-Trejo, S, Rudino-Pinera, E, Becerril, B.
登録日2014-09-25
公開日2015-10-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Optimal Neutralization of Centruroides Noxius Venom is Understood Through a Structural Complex between Two Antibody Fragments and the Cn2 Toxin.
J.Biol.Chem., 291, 2016
6WNU
DownloadVisualize
BU of 6wnu by Molmil
Crystal structure of the three-domain cyclomaltodextrin glucanotransferase CldA in the monomeric form
分子名称: ACETATE ION, CALCIUM ION, Cyclomaltodextrin glucanotransferase, ...
著者Magana-Cuevas, E, Centeno-Leija, S, Serrano-Posada, H.
登録日2020-04-23
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Discovery of a novel group of three-domain thermophilic cyclomaltodextrin glucanotransferases: structural and functional implications.
To Be Published
6WNI
DownloadVisualize
BU of 6wni by Molmil
Crystal structure of CldA, the first cyclomaltodextrin glucanotransferase with a three-domain ABC distribution
分子名称: CALCIUM ION, CITRATE ANION, Cyclomaltodextrin glucanotransferase, ...
著者Magana-Cuevas, E, Centeno-Leija, S, Serrano-Posada, H.
登録日2020-04-22
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Discovery of a novel group of three-domain thermophilic cyclomaltodextrin glucanotransferases: structural and functional implications.
To Be Published
6OH7
DownloadVisualize
BU of 6oh7 by Molmil
Crystal structure of (E)-biformene synthase LrdC from Streptomyces sp. strain K155 in complex with Mg
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Labdane-related diterpene synthase, ...
著者Centeno-Leija, S, Serrano-Posada, H.
登録日2019-04-04
公開日2019-04-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The structure of (E)-biformene synthase provides insights into the biosynthesis of bacterial bicyclic labdane-related diterpenoids.
J.Struct.Biol., 207, 2019
6OH6
DownloadVisualize
BU of 6oh6 by Molmil
Crystal structure of (E)-biformene synthase LrdC from Streptomyces sp. strain K155 in complex with Mg and PPi
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Labdane-related diterpene synthase, ...
著者Centeno-Leija, S, Serrano-Posada, H.
登録日2019-04-04
公開日2019-04-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The structure of (E)-biformene synthase provides insights into the biosynthesis of bacterial bicyclic labdane-related diterpenoids.
J.Struct.Biol., 207, 2019
6OH8
DownloadVisualize
BU of 6oh8 by Molmil
Crystal structure of (E)-biformene synthase LrdC from Streptomyces sp. strain K155 in the dimeric form
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Labdane-related diterpene synthase
著者Centeno-Leija, S, Serrano-Posada, H.
登録日2019-04-04
公開日2019-04-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献The structure of (E)-biformene synthase provides insights into the biosynthesis of bacterial bicyclic labdane-related diterpenoids.
J.Struct.Biol., 207, 2019

 

123>

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon