7QDH
 
 | | SARS-CoV-2 S protein S:D614G mutant 1-up | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin | | 著者 | Ginex, T, Marco-Marin, C, Wieczor, M, Mata, C.P, Krieger, J, Lopez-Redondo, M.L, Frances-Gomez, C, Ruiz-Rodriguez, P, Melero, R, Sanchez-Sorzano, C.O, Martinez, M, Gougeard, N, Forcada-Nadal, A, Zamora-Caballero, S, Gozalbo-Rovira, R, Sanz-Frasquet, C, Bravo, J, Rubio, V, Marina, A, Geller, R, Comas, I, Gil, C, Coscolla, M, Orozco, M, LLacer, J.L, Carazo, J.M. | | 登録日 | 2021-11-27 | | 公開日 | 2022-05-25 | | 最終更新日 | 2022-08-10 | | 実験手法 | ELECTRON MICROSCOPY (4.2 Å) | | 主引用文献 | The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation.
Plos Pathog., 18, 2022
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7QDG
 | | SARS-CoV-2 S protein S:A222V + S:D614G mutant 1-up | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | | 著者 | Ginex, T, Marco-Marin, C, Wieczor, M, Mata, C.P, Krieger, J, Lopez-Redondo, M.L, Frances-Gomez, C, Ruiz-Rodriguez, P, Melero, R, Sanchez-Sorzano, C.O, Martinez, M, Gougeard, N, Forcada-Nadal, A, Zamora-Caballero, S, Gozalbo-Rovira, R, Sanz-Frasquet, C, Bravo, J, Rubio, V, Marina, A, Geller, R, Comas, I, Gil, C, Coscolla, M, Orozco, M, LLacer, J.L, Carazo, J.M. | | 登録日 | 2021-11-27 | | 公開日 | 2022-05-25 | | 最終更新日 | 2022-08-24 | | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | | 主引用文献 | The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation.
Plos Pathog., 18, 2022
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8P9Y
 | | SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, ... | | 著者 | Adhav, A, Forcada-Nadal, A, Marco-Marin, C, Lopez-Redondo, M.L, Llacer, J.L. | | 登録日 | 2023-06-06 | | 公開日 | 2023-09-27 | | 実験手法 | ELECTRON MICROSCOPY (4.3 Å) | | 主引用文献 | C-2 Thiophenyl Tryptophan Trimers Inhibit Cellular Entry of SARS-CoV-2 through Interaction with the Viral Spike (S) Protein.
J.Med.Chem., 66, 2023
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8P99
 | | SARS-CoV-2 S-protein:D614G mutant in 1-up conformation | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1,Spike glycoprotein | | 著者 | Adhav, A, Forcada-Nadal, A, Marco-Marin, C, Lopez-Redondo, M.L, Llacer, J.L. | | 登録日 | 2023-06-05 | | 公開日 | 2023-09-27 | | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | | 主引用文献 | C-2 Thiophenyl Tryptophan Trimers Inhibit Cellular Entry of SARS-CoV-2 through Interaction with the Viral Spike (S) Protein.
J.Med.Chem., 66, 2023
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7KZX
 | | Cryo-EM structure of YiiP-Fab complex in Apo state | | 分子名称: | Cadmium and zinc efflux pump FieF, Fab2R heavy chain, Fab2R light chain | | 著者 | Lopez-Redondo, M.L, Fan, S, Koide, A, Koide, S, Beckstein, O, Stokes, D.L. | | 登録日 | 2020-12-10 | | 公開日 | 2021-01-06 | | 最終更新日 | 2021-07-28 | | 実験手法 | ELECTRON MICROSCOPY (4 Å) | | 主引用文献 | Zinc binding alters the conformational dynamics and drives the transport cycle of the cation diffusion facilitator YiiP.
J.Gen.Physiol., 153, 2021
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7KZZ
 | | Cryo-EM structure of YiiP-Fab complex in Holo state | | 分子名称: | Cadmium and zinc efflux pump FieF, Fab2R heavy chain, Fab2R light chain, ... | | 著者 | Lopez-Redondo, M.L, Fan, S, Koide, A, Koide, S, Beckstein, O, Stokes, D.L. | | 登録日 | 2020-12-10 | | 公開日 | 2021-01-06 | | 最終更新日 | 2021-07-28 | | 実験手法 | ELECTRON MICROSCOPY (3.42 Å) | | 主引用文献 | Zinc binding alters the conformational dynamics and drives the transport cycle of the cation diffusion facilitator YiiP.
J.Gen.Physiol., 153, 2021
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5VRF
 | | CryoEM Structure of the Zinc Transporter YiiP from helical crystals | | 分子名称: | Cadmium and zinc efflux pump FieF, ZINC ION | | 著者 | Coudray, N, Lopez-Redondo, M, Zhang, Z, Alexopoulos, J, Stokes, D.L, Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS) | | 登録日 | 2017-05-10 | | 公開日 | 2018-03-14 | | 最終更新日 | 2024-03-13 | | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | | 主引用文献 | Structural basis for the alternating access mechanism of the cation diffusion facilitator YiiP.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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8F6H
 | | Cryo-EM structure of a Zinc-loaded asymmetrical TMD D70A mutant of the YiiP-Fab complex | | 分子名称: | Cadmium and zinc efflux pump FieF, Fab2r heavy chain, Fab2r light chain, ... | | 著者 | Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L. | | 登録日 | 2022-11-16 | | 公開日 | 2023-02-08 | | 最終更新日 | 2024-08-21 | | 実験手法 | ELECTRON MICROSCOPY (3.9 Å) | | 主引用文献 | Energy coupling and stoichiometry of Zn 2+ /H + antiport by the prokaryotic cation diffusion facilitator YiiP.
Elife, 12, 2023
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8F6E
 | | Cryo-EM structure of a Zinc-loaded wild-type YiiP-Fab complex | | 分子名称: | Cadmium and zinc efflux pump FieF, Fab heavy chain, Fab light chain, ... | | 著者 | Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L. | | 登録日 | 2022-11-16 | | 公開日 | 2023-02-08 | | 最終更新日 | 2024-08-21 | | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | | 主引用文献 | Energy coupling and stoichiometry of Zn 2+ /H + antiport by the prokaryotic cation diffusion facilitator YiiP.
Elife, 12, 2023
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8F6K
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8F6F
 | | Cryo-EM structure of a Zinc-loaded D51A mutant of the YiiP-Fab complex | | 分子名称: | Cadmium and zinc efflux pump FieF, Fab2r heavy chain, Fab2r light chain, ... | | 著者 | Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L. | | 登録日 | 2022-11-16 | | 公開日 | 2023-02-08 | | 最終更新日 | 2024-08-21 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | Energy coupling and stoichiometry of Zn 2+ /H + antiport by the prokaryotic cation diffusion facilitator YiiP.
Elife, 12, 2023
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8F6J
 | | Cryo-EM structure of a Zinc-loaded D287A mutant of the YiiP-Fab complex | | 分子名称: | Cadmium and zinc efflux pump FieF, Fab2r heavy chain, Fab2r light chain, ... | | 著者 | Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L. | | 登録日 | 2022-11-16 | | 公開日 | 2023-02-08 | | 最終更新日 | 2024-08-21 | | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | | 主引用文献 | Energy coupling and stoichiometry of Zn 2+ /H + antiport by the prokaryotic cation diffusion facilitator YiiP.
Elife, 12, 2023
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8F6I
 | | Cryo-EM structure of a Zinc-loaded symmetrical D70A mutant of the YiiP-Fab complex | | 分子名称: | Cadmium and zinc efflux pump FieF, Fab2r heavy chain, Fab2r light chain, ... | | 著者 | Lopez-Redondo, M.L, Hussein, A.K, Stokes, D.L. | | 登録日 | 2022-11-16 | | 公開日 | 2023-02-08 | | 最終更新日 | 2024-08-21 | | 実験手法 | ELECTRON MICROSCOPY (4.03 Å) | | 主引用文献 | Energy coupling and stoichiometry of Zn 2+ /H + antiport by the prokaryotic cation diffusion facilitator YiiP.
Elife, 12, 2023
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8QXI
 | | SipA solution structure | | 分子名称: | Uncharacterized protein SEF0032 | | 著者 | Neira, J.L. | | 登録日 | 2023-10-24 | | 公開日 | 2024-03-06 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure and dynamics of the cyanobacterial regulator SipA.
Arch.Biochem.Biophys., 754, 2024
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