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4Z9I
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BU of 4z9i by Molmil
Asp-TarS from E. coli
分子名称: ASPARTIC ACID, Methyl-accepting chemotaxis protein II
著者Mise, T.
登録日2015-04-10
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural Analysis of the Ligand-Binding Domain of the Aspartate Receptor Tar from Escherichia coli
Biochemistry, 55, 2016
4Z9H
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BU of 4z9h by Molmil
Asp-Tar from E. coli
分子名称: ASPARTIC ACID, Methyl-accepting chemotaxis protein II
著者Mise, T.
登録日2015-04-10
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.452 Å)
主引用文献Structural Analysis of the Ligand-Binding Domain of the Aspartate Receptor Tar from Escherichia coli
Biochemistry, 55, 2016
4Z9J
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Apo-Tar from E. coli
分子名称: Methyl-accepting chemotaxis protein II
著者Mise, T.
登録日2015-04-10
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structural Analysis of the Ligand-Binding Domain of the Aspartate Receptor Tar from Escherichia coli
Biochemistry, 55, 2016
3HRX
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BU of 3hrx by Molmil
Crystal structure of phenylacetic acid degradation protein PaaG
分子名称: Probable enoyl-CoA hydratase
著者Kichise, T, Hisano, T, Takeda, K, Miki, K.
登録日2009-06-10
公開日2009-06-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of phenylacetic acid degradation protein PaaG from Thermus thermophilus HB8
Proteins, 76, 2009
1NXN
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BU of 1nxn by Molmil
SOLUTION STRUCTURE OF CONTRYPHAN-VN
分子名称: CONTRYPHAN-VN, MAJOR FORM (CIS CONFORMER)
著者Eliseo, T, Cicero, D.O, Polticelli, F, Schinina, M.E, Massilia, G.R, Paci, M, Ascenzi, P.
登録日2003-02-11
公開日2003-03-04
最終更新日2020-06-24
実験手法SOLUTION NMR
主引用文献Solution structure of the cyclic peptide contryphan-Vn, a Ca2+-dependent K+ channel modulator
Biopolymers, 74, 2004
2JN3
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BU of 2jn3 by Molmil
NMR structure of cl-BABP complexed to chenodeoxycholic acid
分子名称: CHENODEOXYCHOLIC ACID, Fatty acid-binding protein, liver
著者Eliseo, T, Ragona, L, Catalano, M, Assfalf, M, Paci, M, Zetta, L, Molinari, H, Cicero, D.O.
登録日2006-12-22
公開日2007-07-03
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Structural and dynamic determinants of ligand binding in the ternary complex of chicken liver bile acid binding protein with two bile salts revealed by NMR
Biochemistry, 46, 2007
5JHQ
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BU of 5jhq by Molmil
ARCs 1-3 of human Tankyrase-1 bound to a peptide derived from IRAP
分子名称: Peptide derived from insulin-responsive aminopeptidase (IRAP), Tankyrase-1
著者Eisemann, T, Pascal, J.M.
登録日2016-04-21
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Tankyrase-1 Ankyrin Repeats Form an Adaptable Binding Platform for Targets of ADP-Ribose Modification.
Structure, 24, 2016
1ZZF
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BU of 1zzf by Molmil
The DNA-bound solution structure of HPV-16 E2 DNA-binding domain
分子名称: Regulatory protein E2
著者Eliseo, T, Nadra, A.D, De Prat-Gay, G, Paci, M, Cicero, O.D.
登録日2005-06-14
公開日2006-03-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The DNA-bound solution structure of HPV-16 E2 DNA-binding domain
to be published
2K1Q
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BU of 2k1q by Molmil
NMR structure of hepatitis c virus ns3 serine protease complexed with the non-covalently bound phenethylamide inhibitor
分子名称: NS3 PROTEASE, PHENETHYLAMIDE, ZINC ION
著者Eliseo, T, Gallo, M, Pennestri, M, Bazzo, R, Cicero, D.O.
登録日2008-03-13
公開日2009-02-03
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Binding of a noncovalent inhibitor exploiting the S' region stabilizes the hepatitis C virus NS3 protease conformation in the absence of cofactor.
J.Mol.Biol., 385, 2009
8HLB
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BU of 8hlb by Molmil
Cryo-EM structure of biparatopic antibody Bp109-92 in complex with TNFR2
分子名称: TR109 heavy chain, TR109 light chain, TR92 heavy chain, ...
著者Akiba, H, Fujita, J, Ise, T, Nishiyama, K, Miyata, T, Kato, T, Namba, K, Ohno, H, Kamada, H, Nagata, S, Tsumoto, K.
登録日2022-11-29
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Development of a 1:1-binding biparatopic anti-TNFR2 antagonist by reducing signaling activity through epitope selection.
Commun Biol, 6, 2023
6YQN
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BU of 6yqn by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with the dual inhibitor TW9
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ~{N}-(2-aminophenyl)-4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]t rideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]benzamide
著者Joerger, A.C, Balourdas, D.I, Weiser, T, Chatterjee, D, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-17
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Characterization of a dual BET/HDAC inhibitor for treatment of pancreatic ductal adenocarcinoma.
Int.J.Cancer, 147, 2020
6YQP
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Crystal structure of the first bromodomain of human BRD4 in complex with the dual inhibitor TW22
分子名称: (~{E})-3-[4-[[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6 ),4,7,10,12-pentaen-9-yl]ethanoylamino]methyl]phenyl]-~{N}-oxidanyl-prop-2-enamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
著者Joerger, A.C, Balourdas, D.I, Weiser, T, Chatterjee, D, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-17
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Characterization of a dual BET/HDAC inhibitor for treatment of pancreatic ductal adenocarcinoma.
Int.J.Cancer, 147, 2020
6YQO
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Crystal structure of the first bromodomain of human BRD4 in complex with the dual inhibitor TW12
分子名称: (S)-N1-(4-(2-(4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetamido)phenyl)-N8-hydroxyoctanediamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
著者Joerger, A.C, Balourdas, D.I, Weiser, T, Chatterjee, D, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-17
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Characterization of a dual BET/HDAC inhibitor for treatment of pancreatic ductal adenocarcinoma.
Int.J.Cancer, 147, 2020
2MNQ
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BU of 2mnq by Molmil
1H, 13C, and 15N Chemical Shift Assignments for Thymosin alpha 1
分子名称: THYMOSIN ALPHA-1
著者Nepravishta, R, Mandaliti, W, Eliseo, T, Sinibaldi Vallebona, P, Pica, F, Garaci, E, Paci, M.
登録日2014-04-09
公開日2015-03-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Thymosin alpha 1 inserts N terminus into model membranes assuming a helical conformation.
Expert Opin Biol Ther, 15 Suppl 1, 2015
2OII
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BU of 2oii by Molmil
Structure of EMILIN-1 C1q-like domain
分子名称: EMILIN-1
著者Verdone, G, Colebrooke, S.A, Corazza, A, Cicero, D.O, Eliseo, T, Viglino, P, Campbell, I.D, Colombatti, A, Esposito, G.
登録日2007-01-11
公開日2008-01-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The solution structure of the C-terminal domain of EMILIN-1
To be Published
2K6L
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BU of 2k6l by Molmil
The solution structure of XACb0070 from Xanthonomas axonopodis pv citri reveals this new protein is a member of the RHH family of transcriptional repressors
分子名称: Putative uncharacterized protein
著者Gallo, M, Cicero, D.O, Amata, I, Eliseo, T, Paci, M, Spisni, A, Ferrari, E, Pertinhez, T.A, Farah, C.S.
登録日2008-07-11
公開日2009-06-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The solution structure reveals that XACb0070 from the plant pathogen Xanthomonas citri belongs to the RHH superfamily of bacterial DNA-binding proteins
To be Published
2KA3
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BU of 2ka3 by Molmil
Structure of EMILIN-1 C1Q-like domain
分子名称: EMILIN-1
著者Verdone, G, Corazza, A, Colebrooke, S.A, Cicero, D.O, Eliseo, T, Boyd, J, Doliana, R, Fogolari, F, Viglino, P, Colombatti, A, Campbell, I.D, Esposito, G.
登録日2008-10-30
公開日2008-11-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR-based homology model for the solution structure of the C-terminal globular domain of EMILIN1
J.Biomol.Nmr, 43, 2009
6FE6
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BU of 6fe6 by Molmil
Solution structure of a last generation P2-P4 macrocyclic inhibitor
分子名称: (3aR,7S,10S,12R,24aR)-7-cyclopentyl-N-{(1R,2S)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethenylcyclopropyl}-5,8-dioxo-1,2,3,3a,5,6,7,8,11,12,20,21,22,23,24,24a-hexadecahydro-10H-9,12-methanocyclopenta[18,19][1,10,3,6]dioxadiazacyclononadecino[12,11-b]quinoline-10-carboxamide, Non-structural 3 protease, ZINC ION
著者Gallo, M, Eliseo, T, Cicero, D.O.
登録日2017-12-29
公開日2019-01-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a last generation macrocyclic inhibitor. Hepatitis C virus NS3 protease complex: when S prime region occupancy is not enough to stabilize the protein conformation in the absence of NS4A.
To Be Published
1R8P
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BU of 1r8p by Molmil
HPV-16 E2C solution structure
分子名称: Regulatory protein E2
著者Nadra, A.D, Eliseo, T, Cicero, D.O.
登録日2003-10-28
公開日2004-11-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the HPV-16 E2 DNA binding domain, a transcriptional regulator with a dimeric beta-barrel fold
J.Biomol.NMR, 30, 2004
1ZRY
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BU of 1zry by Molmil
NMR structural analysis of apo chicken liver bile acid binding protein
分子名称: Fatty acid-binding protein, liver
著者Ragona, L, Catalano, M, Luppi, M, Cicero, D, Eliseo, T, Foote, J, Fogolari, F, Zetta, L, Molinari, H.
登録日2005-05-23
公開日2006-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Dynamic Studies Suggest that Allosteric Activation Regulates Ligand Binding in Chicken Liver Bile Acid-binding Protein
J.Biol.Chem., 281, 2006
8YX1
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BU of 8yx1 by Molmil
CD40 in complex with Bleselumab Fab
分子名称: Bleselumab, heavy chain, light chain, ...
著者Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
登録日2024-04-01
公開日2024-05-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of human CD40 in complex with monoclonal antibodies dacetuzumab and bleselumab.
Biochem.Biophys.Res.Commun., 714, 2024
8YX9
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BU of 8yx9 by Molmil
CD40 in complex with Dacetuzumab Fab
分子名称: Dacetuzumab, Heavy chain, light chain, ...
著者Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
登録日2024-04-02
公開日2024-05-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of human CD40 in complex with monoclonal antibodies dacetuzumab and bleselumab.
Biochem.Biophys.Res.Commun., 714, 2024
6DFJ
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BU of 6dfj by Molmil
Crystal structure of anti-Zika antibody Z021 bound to DENV-1 envelope protein DIII
分子名称: Dengue 1 Envelope DIII domain, anti-Zika antibody Z021, Heavy Chain, ...
著者Keeffe, J.R, Bjorkman, P.J.
登録日2018-05-14
公開日2018-10-24
最終更新日2018-11-14
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献A Combination of Two Human Monoclonal Antibodies Prevents Zika Virus Escape Mutations in Non-human Primates.
Cell Rep, 25, 2018
8EKD
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BU of 8ekd by Molmil
Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with 2130-1-0114-112
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab LLNL-199 HC, Fab LLNL-199 LC, ...
著者Binshtein, E, Crowe, J.E.
登録日2022-09-20
公開日2024-02-21
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Computationally restoring the potency of a clinical antibody against Omicron.
Nature, 629, 2024
8FGX
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BU of 8fgx by Molmil
Cryo-EM structure of the STAR-0215 Fab in complex with active human plasma kallikrein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plasma kallikrein light chain, STAR-0215 Heavy chain, ...
著者Fuller, J.R, Biris, N, Bista, P.
登録日2022-12-13
公開日2023-09-06
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献STAR-0215 is a Novel, Long-Acting Monoclonal Antibody Inhibitor of Plasma Kallikrein for the Potential Treatment of Hereditary Angioedema.
J.Pharmacol.Exp.Ther., 387, 2023

 

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