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2QY1
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pectate lyase A31G/R236F from Xanthomonas campestris
分子名称: PHOSPHATE ION, Pectate lyase II
著者Garron, M.L, Shaya, D.
登録日2007-08-13
公開日2008-02-26
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Improvement of the thermostability and activity of a pectate lyase by single amino acid substitutions, using a strategy based on melting-temperature-guided sequence alignment.
Appl.Environ.Microbiol., 74, 2008
2QXZ
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pectate lyase R236F from Xanthomonas campestris
分子名称: PHOSPHATE ION, pectate lyase II
著者Garron, M.L, Shaya, D.
登録日2007-08-13
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Improvement of the thermostability and activity of a pectate lyase by single amino acid substitutions, using a strategy based on melting-temperature-guided sequence alignment.
Appl.Environ.Microbiol., 74, 2008
3IKW
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BU of 3ikw by Molmil
Structure of Heparinase I from Bacteroides thetaiotaomicron
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Heparin lyase I
著者Garron, M.L, Cygler, M, Shaya, D.
登録日2009-08-06
公開日2009-09-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I.
J.Biol.Chem., 284, 2009
3ILR
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BU of 3ilr by Molmil
Structure of Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product
分子名称: 1,2-ETHANEDIOL, 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(4-1)-4-deoxy-2-O-sulfo-beta-D-erythro-hex-4-enopyranuronic acid, 4-deoxy-2-O-sulfo-beta-D-erythro-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ...
著者Garron, M.L, Cygler, M, Shaya, D.
登録日2009-08-07
公開日2009-09-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I.
J.Biol.Chem., 284, 2009
5JVK
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BU of 5jvk by Molmil
Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2.
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, SULFATE ION, ...
著者Ali-Ahmad, A, Garron, M.L, Zamboni, V, Lenfant, N, Bourne, Y, Vincent, F.
登録日2016-05-11
公開日2016-12-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2.
J. Struct. Biol., 197, 2017
5A8Q
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Crystal structure beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide A obtained by soaking
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
登録日2015-07-16
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
5A8P
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Crystal structure beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide B
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
登録日2015-07-16
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
5A95
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Crystal structure of beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide A, form 2
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
登録日2015-07-17
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
5A8N
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Crystal structure of the native form of beta-glucanase SdGluc5_26A from Saccharophagus degradans
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
登録日2015-07-16
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
5A94
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Crystal structure of beta-Glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide A, form 1
分子名称: CHLORIDE ION, MAGNESIUM ION, PUTATIVE RETAINING B-GLYCOSIDASE, ...
著者Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
登録日2015-07-17
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
5A8M
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Crystal structure of the selenomethionine derivative of beta-glucanase SdGluc5_26A from Saccharophagus degradans
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
登録日2015-07-16
公開日2016-01-20
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
5A8O
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BU of 5a8o by Molmil
Crystal structure of beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with cellotetraose
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
登録日2015-07-16
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
6H7T
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Native structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Turbe-Doan, A, Record, E, Lombard, V, Kumar, R, Henrissat, B, Levasseur, A, Garron, M.L.
登録日2018-07-31
公開日2019-08-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The functional and structural characterization of Trichoderma reesei dehydrogenase belonging to the PQQ dependent family of Carbohydrate-Active Enzymes Family AA12.
Appl.Environ.Microbiol., 2019
6I1T
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Calcium structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Turbe-Doan, A, Record, E, Lombard, V, Kumar, R, Henrissat, B, Levasseur, A, Garron, M.L.
登録日2018-10-30
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The functional and structural characterization ofTrichoderma reeseidehydrogenase belonging to the PQQ dependent family of Carbohydrate-Active Enzymes Family AA12.
Appl.Environ.Microbiol., 2019
6I1Q
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BU of 6i1q by Molmil
Iodide structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Turbe-Doan, A, Record, E, Lombard, V, Kumar, R, Henrissat, B, Levasseur, A, Garron, M.L.
登録日2018-10-30
公開日2019-11-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The functional and structural characterization ofTrichoderma reeseidehydrogenase belonging to the PQQ dependent family of Carbohydrate-Active Enzymes Family AA12.
Appl.Environ.Microbiol., 2019
3B71
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BU of 3b71 by Molmil
CD4 endocytosis motif bound to the Focal Adhesion Targeting (FAT) domain of the Focal Adhesion Kinase
分子名称: Focal adhesion kinase 1, T-cell surface glycoprotein CD4
著者Garron, M.-L, Arold, S.T.
登録日2007-10-30
公開日2008-01-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Structural basis for the interaction between focal adhesion kinase and CD4.
J.Mol.Biol., 375, 2008
2QX3
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Structure of pectate lyase II from Xanthomonas campestris pv. campestris str. ATCC 33913
分子名称: PHOSPHATE ION, Pectate lyase II
著者Garron, M.L, Shaya, D.
登録日2007-08-10
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A seductive method to improve the thermostability and activity of an enzyme
To be Published
5JMD
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Heparinase III-BT4657 gene product, Methylated Lysines
分子名称: Heparinase III protein, MAGNESIUM ION
著者Ulaganathan, T.S, Shi, R, Yao, D, Garron, M.-L, Cherney, M, Cygler, M.
登録日2016-04-28
公開日2016-05-25
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Conformational flexibility of PL12 family heparinases: structure and substrate specificity of heparinase III from Bacteroides thetaiotaomicron (BT4657).
Glycobiology, 27, 2017
5JMF
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Heparinase III-BT4657 gene product
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Heparinase III protein, ...
著者Ulaganathan, T.S, Shi, R, Yao, D, Garron, M.-L, Cherney, M, Cygler, M.
登録日2016-04-28
公開日2016-05-25
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (1.854 Å)
主引用文献Conformational flexibility of PL12 family heparinases: structure and substrate specificity of heparinase III from Bacteroides thetaiotaomicron (BT4657).
Glycobiology, 27, 2017
3E7J
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HeparinaseII H202A/Y257A double mutant complexed with a heparan sulfate tetrasaccharide substrate
分子名称: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Heparinase II protein, ...
著者Shaya, D, Cygler, M.
登録日2008-08-18
公開日2008-12-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Catalytic mechanism of heparinase II investigated by site-directed mutagenesis and the crystal structure with its substrate.
J.Biol.Chem., 285, 2010
3E80
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Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product
分子名称: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Heparinase II protein, PHOSPHATE ION, ...
著者Shaya, D, Cygler, M.
登録日2008-08-19
公開日2008-12-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Catalytic mechanism of heparinase II investigated by site-directed mutagenesis and the crystal structure with its substrate.
J.Biol.Chem., 285, 2010
3IMN
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Crystal structure of heparin lyase I from Bacteroides thetaiotaomicron
分子名称: CALCIUM ION, Heparin lyase I, SULFATE ION
著者Han, Y.H, Ryu, K.S, Jeon, Y.H.
登録日2009-08-10
公開日2009-09-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I
J.Biol.Chem., 284, 2009
3INA
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BU of 3ina by Molmil
Crystal structure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, CALCIUM ION, Heparin lyase I
著者Han, Y.H, Ryu, K.S, Kim, H.Y, Jeon, Y.H.
登録日2009-08-12
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I
J.Biol.Chem., 284, 2009
3IN9
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Crystal structure of heparin lyase I complexed with disaccharide heparin
分子名称: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, Heparin lyase I
著者Han, Y.H, Ryu, K.S, Kim, H.Y, Jeon, Y.H.
登録日2009-08-12
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I
J.Biol.Chem., 284, 2009

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