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8IIC
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Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta40 mutant (residues 41-546)
分子名称: Polymerase polyprotein
著者Fang, X, Lu, G, Hou, C, Gong, P.
登録日2023-02-24
公開日2023-06-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Unusual substructure conformations observed in crystal structures of a dicistrovirus RNA-dependent RNA polymerase suggest contribution of the N-terminal extension in proper folding.
Virol Sin, 38, 2023
8IIB
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BU of 8iib by Molmil
Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta85 mutant (residues 86-546)
分子名称: CADMIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
著者Fang, X, Lu, G, Hou, C, Gong, P.
登録日2023-02-24
公開日2023-06-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Unusual substructure conformations observed in crystal structures of a dicistrovirus RNA-dependent RNA polymerase suggest contribution of the N-terminal extension in proper folding.
Virol Sin, 38, 2023
6NXJ
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BU of 6nxj by Molmil
Flavin Transferase ApbE from Vibrio cholerae, H257G mutant
分子名称: FAD:protein FMN transferase, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
著者Osipiuk, J, Fang, X, Chakravarthy, S, Juarez, O, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-02-08
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Conserved residue His-257 ofVibrio choleraeflavin transferase ApbE plays a critical role in substrate binding and catalysis.
J.Biol.Chem., 294, 2019
6NXI
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Flavin Transferase ApbE from Vibrio cholerae
分子名称: 1,2-ETHANEDIOL, FAD:protein FMN transferase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Osipiuk, J, Fang, X, Chakravarthy, S, Juarez, O, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-02-08
公開日2019-03-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Conserved residue His-257 ofVibrio choleraeflavin transferase ApbE plays a critical role in substrate binding and catalysis.
J.Biol.Chem., 294, 2019
6JIQ
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BU of 6jiq by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
分子名称: DNA (5'-D(*TP*TP*TP*TP*T)-3'), SP_0782
著者Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
登録日2019-02-22
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
6JIP
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Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
分子名称: DNA (5'-D(*TP*TP*TP*TP*T)-3'), PENTAETHYLENE GLYCOL, SP_0782
著者Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
登録日2019-02-22
公開日2019-11-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.659 Å)
主引用文献Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
6M3A
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BU of 6m3a by Molmil
Staphylococcus aureus Bap-C1
分子名称: Biofilm-associated surface protein
著者Fang, X, Ning, X.
登録日2020-03-03
公開日2021-04-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Staphylococcus aureus Bap_C1
To Be Published
8JY0
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BU of 8jy0 by Molmil
Crystal structure of RhoBAST complexed with TMR-DN
分子名称: 2,4-dinitroaniline, 5-aminocarbonyl-2-[3-(dimethylamino)-6-dimethylazaniumylidene-xanthen-9-yl]benzoate, GUANOSINE-5'-DIPHOSPHATE, ...
著者Zhang, Y, Xiao, Y, Xu, Z, Fang, X.
登録日2023-07-02
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural mechanisms for binding and activation of a contact-quenched fluorophore by RhoBAST.
Nat Commun, 15, 2024
2LF0
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BU of 2lf0 by Molmil
Solution structure of sf3636, a two-domain unknown function protein from Shigella flexneri 2a, determined by joint refinement of NMR, residual dipolar couplings and small-angle X-ray scattering, NESG target SfR339/OCSP target sf3636
分子名称: Uncharacterized protein yibL
著者Wu, B, Lemak, A, Yee, A, Lee, H, Gutmanas, A, Semesi, A, Garcia, M, Fang, X, Wang, Y, Prestegard, J.H, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)
登録日2011-06-27
公開日2011-07-13
最終更新日2024-05-15
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Solution structure of sf3636, a two-domain unknown function protein from Shigella flexneri 2a, determined by joint refinement of NMR, residual dipolar couplings and small-angle X-ray scattering
To be Published
7WIA
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BU of 7wia by Molmil
The apo-form of THF-II C22G riboswitch
分子名称: RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WII
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The THF-II riboswitch bound to NPR
分子名称: 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WI9
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BU of 7wi9 by Molmil
The THF-II riboswitch bound to THF and soaking with SeUrea
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, RNA (50-MER), selenourea
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIB
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BU of 7wib by Molmil
The THF-II riboswitch bound to THF
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIF
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BU of 7wif by Molmil
The THF-II riboswitch bound to H4B
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIE
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BU of 7wie by Molmil
The THF-II riboswitch bound to 7DG
分子名称: 7-DEAZAGUANINE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
1E5C
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BU of 1e5c by Molmil
Internal xylan binding domain from C. fimi Xyn10A, R262G mutant
分子名称: XYLANASE D
著者Simpson, P.J, Hefang, X, Bolam, D.N, Gilbert, H.J, Williamson, M.P.
登録日2000-07-24
公開日2001-05-25
最終更新日2018-10-24
実験手法SOLUTION NMR
主引用文献The Structural Basis for the Ligand Specificity of Family 2 Carbohydrate Binding Nodules
J.Biol.Chem., 275, 2000
1E5B
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BU of 1e5b by Molmil
Internal xylan binding domain from C. fimi Xyn10A, R262G mutant
分子名称: XYLANASE D
著者Simpson, P.J, Hefang, X, Bolam, D.N, Gilbert, H.J, Williamson, M.P.
登録日2000-07-24
公開日2001-05-25
最終更新日2018-10-24
実験手法SOLUTION NMR
主引用文献The Structural Basis for the Ligand Specificity of Family 2 Carbohydrate Binding Nodules
J.Biol.Chem., 275, 2000
1Y9X
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BU of 1y9x by Molmil
Solution structure of Archaeon DNA-binding protein ssh10b
分子名称: DNA/RNA-binding protein Alba 1
著者Cui, Q, Tong, Y, Wang, J.
登録日2004-12-16
公開日2005-06-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A stabilizing alpha/beta-hydrophobic core greatly contributes to hyperthermostability of archaeal [P62A]Ssh10b.
Biochemistry, 47, 2008
4M1P
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BU of 4m1p by Molmil
Crystal structure of the copper-sensing repressor CsoR with Cu(I) from Geobacillus thermodenitrificans NG80-2
分子名称: COPPER (I) ION, Copper-sensitive operon repressor (CsoR), SODIUM ION
著者Chang, F, Dann III, C.E, Giedroc, D.P.
登録日2013-08-03
公開日2014-05-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.564 Å)
主引用文献Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR).
J.Biol.Chem., 289, 2014
7C7U
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BU of 7c7u by Molmil
Biofilm associated protein - BSP domain
分子名称: Biofilm-associated surface protein, CALCIUM ION
著者Ma, J.F, Xu, Z.H, Zhang, Y.K, Cheng, X, Fan, S.L, Wang, J.W, Fang, X.Y.
登録日2020-05-26
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural mechanism for modulation of functional amyloid and biofilm formation by Staphylococcal Bap protein switch.
Embo J., 40, 2021
7C7R
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BU of 7c7r by Molmil
Biofilm associated protein - B domain
分子名称: Biofilm-associated surface protein, CALCIUM ION
著者Ma, J.F, Xu, Z.H, Zhang, Y.K, Cheng, X, Fan, S.L, Wang, J.W, Fang, X.Y.
登録日2020-05-26
公開日2021-05-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Structural mechanism for modulation of functional amyloid and biofilm formation by Staphylococcal Bap protein switch.
Embo J., 40, 2021
5T16
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BU of 5t16 by Molmil
Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog
分子名称: 1,2-ETHANEDIOL, RNA substrate analog, Ribonuclease 3
著者Song, H, Ji, X.
登録日2016-08-18
公開日2017-02-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.783 Å)
主引用文献The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III.
Structure, 25, 2017
8KFA
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BU of 8kfa by Molmil
Cryo-EM structure of HSV-1 gB with D48 Fab complex
分子名称: D48 heavy chain, D48 light chain, Envelope glycoprotein B
著者Yang, J, Sun, C, Fang, X, Zeng, M, Liu, Z.
登録日2023-08-15
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献The structure of HSV-1 gB bound to a potent neutralizing antibody reveals a conservative antigenic domain across herpesviruses
hlife, 2023
3SPF
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BU of 3spf by Molmil
Crystal Structure of Bcl-xL bound to BM501
分子名称: 4-(4-chlorophenyl)-1-[(3S)-3,4-dihydroxybutyl]-N-[3-(4-methylpiperazin-1-yl)propyl]-3-phenyl-1H-pyrrole-2-carboxamide, Bcl-2-like protein 1, GLYCEROL
著者Meagher, J.L, Stuckey, J.A.
登録日2011-07-01
公開日2012-06-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Design of Bcl-2 and Bcl-xL Inhibitors with Subnanomolar Binding Affinities Based upon a New Scaffold.
J.Med.Chem., 55, 2012
8FP3
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PKCeta kinase domain in complex with compound 11
分子名称: (3P)-3-{4-[(3R,5S)-3-amino-5-methylpiperidin-1-yl]-6-chloro-7H-pyrrolo[2,3-d]pyrimidin-5-yl}benzonitrile, Protein kinase C eta type
著者Johnson, E.
登録日2023-01-03
公開日2023-04-05
最終更新日2023-04-26
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design and Synthesis of Functionally Active 5-Amino-6-Aryl Pyrrolopyrimidine Inhibitors of Hematopoietic Progenitor Kinase 1.
J.Med.Chem., 66, 2023

 

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