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2FFL
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BU of 2ffl by Molmil
Crystal Structure of Dicer from Giardia intestinalis
分子名称: Dicer, MANGANESE (II) ION
著者Doudna, J.A, MacRae, I.J, Adams, P.D.
登録日2005-12-19
公開日2006-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献Structural Basis of Double-Stranded RNA Processing by Dicer
Science, 311, 2006
2QVW
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BU of 2qvw by Molmil
Structure of Giardia Dicer refined against twinned data
分子名称: GLP_546_48378_50642, MANGANESE (II) ION
著者Doudna, J.A, MacRae, I.J.
登録日2007-08-09
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献An unusual case of pseudo-merohedral twinning in orthorhombic crystals of Dicer
Acta Crystallogr.,Sect.D, 63, 2007
6MCC
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BU of 6mcc by Molmil
CryoEM structure of AcrIIA2 homolog in complex with CRISPR-Cas9
分子名称: Anti-CRISPR AcrIIA2 Homolog, CRISPR-associated endonuclease Cas9, Single guide RNA (116-MER)
著者Jiang, F, Liu, J.J, Doudna, J.A.
登録日2018-08-31
公開日2019-01-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Temperature-Responsive Competitive Inhibition of CRISPR-Cas9.
Mol. Cell, 73, 2019
5I4A
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BU of 5i4a by Molmil
X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA
分子名称: Argonaute protein, RNA (5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*U)-3')
著者Doxzen, K.W, Kaya, E, Knoll, K.R, Wilson, R.C, Strutt, S.C, Kranzusch, P.J, Doudna, J.A.
登録日2016-02-11
公開日2016-03-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献A bacterial Argonaute with noncanonical guide RNA specificity.
Proc.Natl.Acad.Sci.USA, 113, 2016
4ZT9
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BU of 4zt9 by Molmil
Nuclease-inactive Streptococcus pyogenes Cas9 (D10A/H840A, dCas9) in complex with single-guide RNA at 3.1 Angstrom resolution
分子名称: CRISPR-associated endonuclease Cas9, single-guide RNA
著者Jiang, F, Doudna, J.A.
登録日2015-05-14
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A Cas9-guide RNA complex preorganized for target DNA recognition.
Science, 348, 2015
4ZT0
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BU of 4zt0 by Molmil
Crystal structure of catalytically-active Streptococcus pyogenes Cas9 in complex with single-guide RNA at 2.9 Angstrom resolution
分子名称: CRISPR-associated endonuclease Cas9, single-guide RNA
著者Jiang, F, Doudna, J.A.
登録日2015-05-14
公開日2015-07-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Cas9-guide RNA complex preorganized for target DNA recognition.
Science, 348, 2015
7S37
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BU of 7s37 by Molmil
Cas9:sgRNA (S. pyogenes) in the open-protein conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Single-guide RNA
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-04
公開日2022-04-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
7S38
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BU of 7s38 by Molmil
Cas9:sgRNA:DNA (S. pyogenes) forming a 3-base-pair R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target DNA strand, Single-guide RNA, ...
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-04
公開日2022-04-20
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
7S3H
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BU of 7s3h by Molmil
Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, open-protein/linear-DNA conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target DNA strand, Single-guide RNA, ...
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-06
公開日2022-04-20
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
7S36
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BU of 7s36 by Molmil
Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, closed-protein/bent-DNA conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target DNA strand, Single-guide RNA, ...
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-04
公開日2022-04-20
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
5W1H
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BU of 5w1h by Molmil
Crystal structure of LbaCas13a (C2c2) bound to mature crRNA (24-nt spacer)
分子名称: GLYCEROL, IODIDE ION, LbaCas13a (C2c2), ...
著者Knott, G.J, Doudna, J.A.
登録日2017-06-03
公開日2017-09-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
5VVK
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BU of 5vvk by Molmil
Cas1-Cas2 bound to full-site mimic
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(*GP*AP*CP*CP*AP*CP*CP*AP*GP*TP*G)-3'), ...
著者Wright, A.V, Knott, G.J, Doxzen, K.D, Doudna, J.A.
登録日2017-05-19
公開日2017-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of the CRISPR genome integration complex.
Science, 357, 2017
5VVJ
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BU of 5vvj by Molmil
Cas1-Cas2 bound to half-site intermediate
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (112-MER), ...
著者Wright, A.V, Knott, G.J, Doxzen, K.W, Doudna, J.A.
登録日2017-05-19
公開日2017-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.89 Å)
主引用文献Structures of the CRISPR genome integration complex.
Science, 357, 2017
5W1I
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BU of 5w1i by Molmil
Crystal structure of LbaCas13a (C2c2) bound to mature crRNA (20-nt spacer)
分子名称: IODIDE ION, LbaCas13a (C2c2), mature crRNA
著者Knott, G.J, Doudna, J.A.
登録日2017-06-03
公開日2017-09-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
5WFE
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BU of 5wfe by Molmil
Cas1-Cas2-IHF-DNA holo-complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
著者Wright, A.V, Liu, J.J, Nogales, E, Doudna, J.A.
登録日2017-07-11
公開日2017-08-02
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Structures of the CRISPR genome integration complex.
Science, 357, 2017
5WLH
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BU of 5wlh by Molmil
Crystal structure of LbaCas13a H328A (C2c2) bound to pre-crRNA (24-nt spacer)
分子名称: GLYCEROL, IODIDE ION, LbaCas13a H328A (C2c2), ...
著者Knott, G.J, Doudna, J.A.
登録日2017-07-26
公開日2017-09-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.80001032 Å)
主引用文献Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
8VXY
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BU of 8vxy by Molmil
Structure of HamA(E138A,K140A)B-plasmid DNA complex from the Escherichia coli Hachiman defense system
分子名称: ADENOSINE-5'-TRIPHOSPHATE, HamA, HamB, ...
著者Tuck, O.T, Hu, J.J, Doudna, J.A.
登録日2024-02-06
公開日2024-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Hachiman is a genome integrity sensor.
Biorxiv, 2024
8VX9
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BU of 8vx9 by Molmil
Structure of HamAB apo complex from the Escherichia coli Hachiman defense system
分子名称: HamA, HamB
著者Tuck, O.T, Doudna, J.A.
登録日2024-02-03
公開日2024-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献Hachiman is a genome integrity sensor.
Biorxiv, 2024
8VXA
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BU of 8vxa by Molmil
Structure of HamB-DNA complex, conformation 1, from the Escherichia coli Hachiman defense system
分子名称: DNA (40-MER), HamB
著者Tuck, O.T, Doudna, J.A.
登録日2024-02-03
公開日2024-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Hachiman is a genome integrity sensor.
Biorxiv, 2024
8VXC
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BU of 8vxc by Molmil
Structure of HamB-DNA complex, conformation 2, from the Escherichia coli Hachiman defense system
分子名称: DNA (40-MER), HamB
著者Tuck, O.T, Doudna, J.A.
登録日2024-02-04
公開日2024-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Hachiman is a genome integrity sensor.
Biorxiv, 2024
8UZB
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BU of 8uzb by Molmil
Cryo-EM structure of iGeoCas9 in complex with sgRNA and target DNA
分子名称: CRISPR-associated endonuclease Cas9, Non-target strand DNA, RNA (107-MER), ...
著者Eggers, A.R, Soczek, K.M, Tuck, O.T, Doudna, J.A.
登録日2023-11-14
公開日2024-05-29
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Rapid DNA unwinding accelerates genome editing by engineered CRISPR-Cas9.
Cell, 187, 2024
8UZA
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BU of 8uza by Molmil
Cryo-EM structure of GeoCas9 in complex with sgRNA and target DNA
分子名称: CRISPR-associated endonuclease Cas9, Non-target strand DNA, Target strand DNA, ...
著者Eggers, A.R, Soczek, K.M, Tuck, O.T, Doudna, J.A.
登録日2023-11-14
公開日2024-05-29
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Rapid DNA unwinding accelerates genome editing by engineered CRISPR-Cas9.
Cell, 187, 2024
4WYQ
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BU of 4wyq by Molmil
Crystal structure of the Dicer-TRBP interface
分子名称: Endoribonuclease Dicer, Poly(UNK), RISC-loading complex subunit TARBP2
著者Wilson, R.C, Doudna, J.A.
登録日2014-11-18
公開日2014-12-17
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Dicer-TRBP Complex Formation Ensures Accurate Mammalian MicroRNA Biogenesis.
Mol.Cell, 57, 2015
7THB
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BU of 7thb by Molmil
Crystal structure of an RNA-5'/DNA-3' strand exchange junction
分子名称: DNA (5'-D(*GP*AP*TP*GP*CP*TP*C)-3'), DNA (5'-D(*GP*TP*AP*AP*GP*CP*AP*GP*CP*AP*TP*C)-3'), RNA (5'-R(*AP*GP*CP*UP*UP*AP*C)-3')
著者Cofsky, J.C, Knott, G.J, Gee, C.L, Doudna, J.A.
登録日2022-01-10
公開日2022-04-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structure of an RNA/DNA strand exchange junction.
Plos One, 17, 2022
1GID
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CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING
分子名称: COBALT HEXAMMINE(III), MAGNESIUM ION, P4-P6 RNA RIBOZYME DOMAIN
著者Cate, J.H, Gooding, A.R, Podell, E, Zhou, K, Golden, B.L, Kundrot, C.E, Cech, T.R, Doudna, J.A.
登録日1996-08-22
公開日1996-12-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a group I ribozyme domain: principles of RNA packing.
Science, 273, 1996

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