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8GWA
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BU of 8gwa by Molmil
Structure of the intact photosynthetic light-harvesting antenna-reaction center complex from a green sulfur bacterium
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E,19E)-3,7,12,16,20,24-hexamethylpentacosa-1,3,5,7,9,11,13,15,17,19,23-undecaenyl]-1,3,4-trimethyl-benzene, ...
著者Chen, J.H, Zhang, X.
登録日2022-09-16
公開日2022-11-23
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-electron microscopy structure of the intact photosynthetic light-harvesting antenna-reaction center complex from a green sulfur bacterium.
J Integr Plant Biol, 65, 2023
6M32
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BU of 6m32 by Molmil
Cryo-EM structure of FMO-RC complex from green sulfur bacteria
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E,19E)-3,7,12,16,20,24-hexamethylpentacosa-1,3,5,7,9,11,13,15,17,19,23-undecaenyl]-1,3,4-trimethyl-benzene, ...
著者Chen, J.H, Zhang, X.
登録日2020-03-02
公開日2020-11-25
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Architecture of the photosynthetic complex from a green sulfur bacterium.
Science, 370, 2020
7XR8
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BU of 7xr8 by Molmil
Structure of the S8 family protease A4095
分子名称: Major intracellular serine protease
著者Cheng, J.H, Cao, H.Y, Wang, P.
登録日2022-05-09
公開日2023-05-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structure of the S8 family protease A4095
To Be Published
9KM0
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BU of 9km0 by Molmil
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with EDTA-2Na-containing solutions
分子名称: (21R,24R,27S)-24,27,28-trihydroxy-18,24-dioxo-19,23,25-trioxa-24lambda~5~-phosphaoctacosan-21-yl (9Z)-octadec-9-enoate, (4~{E},16~{E},26~{E})-2-methoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-4,6,8,10,12,14,16,18,20,22,26,30-dodecaen-3-one, Antenna pigment protein alpha chain, ...
著者Chen, J.H.
登録日2024-11-15
公開日2025-04-02
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Cryo-EM Analysis of a Tri-Heme Cytochrome-Associated RC-LH1 Complex from the Marine Photoheterotrophic Bacterium Dinoroseobacter Shibae.
Adv Sci, 12, 2025
5YNZ
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BU of 5ynz by Molmil
Crystal structure of the dihydroorotase domain (K1556A) of human CAD
分子名称: CAD protein, ZINC ION
著者Huang, Y.H, Chen, K.L, Cheng, J.H, Huang, C.Y.
登録日2017-10-26
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.774 Å)
主引用文献Crystal structures of monometallic dihydropyrimidinase and the human dihydroorotase domain K1556A mutant reveal no lysine carbamylation within the active site
Biochem. Biophys. Res. Commun., 505, 2018
8YZ2
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BU of 8yz2 by Molmil
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with magnesium solutions
分子名称: (21R,24R,27S)-24,27,28-trihydroxy-18,24-dioxo-19,23,25-trioxa-24lambda~5~-phosphaoctacosan-21-yl (9Z)-octadec-9-enoate, (4~{E},16~{E},26~{E})-2-methoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-4,6,8,10,12,14,16,18,20,22,26,30-dodecaen-3-one, Antenna pigment protein alpha chain, ...
著者Chen, J.H, Zheng, Q, Zhang, X.
登録日2024-04-05
公開日2025-04-02
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Cryo-EM Analysis of a Tri-Heme Cytochrome-Associated RC-LH1 Complex from the Marine Photoheterotrophic Bacterium Dinoroseobacter Shibae.
Adv Sci, 12, 2025
8YY9
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BU of 8yy9 by Molmil
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with magnesium-free solutions.
分子名称: (21R,24R,27S)-24,27,28-trihydroxy-18,24-dioxo-19,23,25-trioxa-24lambda~5~-phosphaoctacosan-21-yl (9Z)-octadec-9-enoate, (4~{E},16~{E},26~{E})-2-methoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-4,6,8,10,12,14,16,18,20,22,26,30-dodecaen-3-one, Antenna pigment protein alpha chain, ...
著者Chen, J.H, Zheng, Q, Zhang, X.
登録日2024-04-03
公開日2025-04-02
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM Analysis of a Tri-Heme Cytochrome-Associated RC-LH1 Complex from the Marine Photoheterotrophic Bacterium Dinoroseobacter Shibae.
Adv Sci, 12, 2025
7DWQ
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BU of 7dwq by Molmil
Photosystem I from a chlorophyll d-containing cyanobacterium Acaryochloris marina
分子名称: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Chen, J.H, Zhang, X, Shen, J.R.
登録日2021-01-17
公開日2021-06-02
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A unique photosystem I reaction center from a chlorophyll d-containing cyanobacterium Acaryochloris marina.
J Integr Plant Biol, 63, 2021
3SJM
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BU of 3sjm by Molmil
Crystal Structure Analysis of TRF2-Dbd-DNA complex
分子名称: DNA (5'-D(*CP*TP*CP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*GP*A)-3'), Telomeric repeat-binding factor 2
著者Nair, S.K, Sliverman, S.K, Chen, J.H, Xiao, Y.
登録日2011-06-21
公開日2012-10-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal Structure Analysis of TRF2-Dbd-DNA complex
To be Published
5V9U
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BU of 5v9u by Molmil
Crystal Structure of small molecule ARS-1620 covalently bound to K-Ras G12C
分子名称: (S)-1-{4-[6-chloro-8-fluoro-7-(2-fluoro-6-hydroxyphenyl)quinazolin-4-yl] piperazin-1-yl}propan-1-one, CALCIUM ION, GLYCEROL, ...
著者Janes, M.R, Zhang, J, Li, L.-S, Hansen, R, Peters, U, Guo, X, Chen, Y, Babbar, A, Firdaus, S.J, Feng, J, Chen, J.H, Li, S, Brehmer, D, Darjania, L, Li, S, Long, Y.O, Thach, C, Liu, Y, Zarieh, A, Ely, T, Kucharski, J.M, Kessler, L.V, Wu, T, Wang, Y, Yao, Y, Deng, X, Zarrinkar, P, Dashyant, D, Lorenzi, M.V, Hu-Lowe, D, Patricelli, M.P, Ren, P, Liu, Y.
登録日2017-03-23
公開日2018-02-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Targeting KRAS Mutant Cancers with a Covalent G12C-Specific Inhibitor.
Cell, 172, 2018
5F2E
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BU of 5f2e by Molmil
Crystal Structure of small molecule ARS-853 covalently bound to K-Ras G12C
分子名称: 1-[3-[4-[2-[[4-chloranyl-5-(1-methylcyclopropyl)-2-oxidanyl-phenyl]amino]ethanoyl]piperazin-1-yl]azetidin-1-yl]prop-2-en-1-one, GLYCEROL, GLYCINE, ...
著者Patricelli, M.P, Janes, M.R, Li, L.-S, Hansen, R, Peters, U, Kessler, L.V, Chen, Y, Kucharski, J.M, Feng, J, Ely, T, Chen, J.H, Firdaus, S.J, Babbar, A, Ren, P, Liu, Y.
登録日2015-12-01
公開日2016-01-13
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Selective Inhibition of Oncogenic KRAS Output with Small Molecules Targeting the Inactive State.
Cancer Discov, 6, 2016
9IQO
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BU of 9iqo by Molmil
Cryo-EM structure of the Rubisco from thermophilic purple bacterial Rubisco
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit
著者Chang, S.H, Chen, J.H.
登録日2024-07-13
公開日2025-03-05
実験手法ELECTRON MICROSCOPY (1.55 Å)
主引用文献Cryo-EM structure of a purple bacterial Rubisco at 1.55 Angstroms resolution
To Be Published
3NKB
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BU of 3nkb by Molmil
A 1.9A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage
分子名称: DNA/RNA (5'-D(*(DUR))-D(*GP*G)-R(P*CP*UP*UP*GP*CP*A)-3'), MAGNESIUM ION, The hepatitis delta virus ribozyme
著者Chen, J.-H, Yajima, R, Chadalavada, D.M, Chase, E, Bevilacqua, P.C, Golden, B.L.
登録日2010-06-18
公開日2010-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.916 Å)
主引用文献A 1.9 A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage.
Biochemistry, 49, 2010
5ZE8
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BU of 5ze8 by Molmil
Crystal structure of a penta-heme cytochrome c552 from Thermochromatium tepidum
分子名称: GLYCEROL, HEME C, SULFATE ION, ...
著者Yu, L.-J, Chen, J.-H, Shen, J.-R.
登録日2018-02-27
公開日2018-04-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Properties and structure of a low-potential, penta-heme cytochrome c552from a thermophilic purple sulfur photosynthetic bacterium Thermochromatium tepidum.
Photosyn. Res., 139, 2019
6IIO
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BU of 6iio by Molmil
Cryo-EM structure of CV-A10 native empty particle
分子名称: VP0, VP1, VP3
著者Chen, J.H, Ye, X.H, Cong, Y, Huang, Z.
登録日2018-10-07
公開日2018-11-07
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Coxsackievirus A10 atomic structure facilitating the discovery of a broad-spectrum inhibitor against human enteroviruses.
Cell Discov, 5, 2019
6IIJ
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BU of 6iij by Molmil
Cryo-EM structure of CV-A10 mature virion
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Chen, J.H, Ye, X.H, Cong, Y, Huang, Z.
登録日2018-10-06
公開日2018-11-07
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Coxsackievirus A10 atomic structure facilitating the discovery of a broad-spectrum inhibitor against human enteroviruses.
Cell Discov, 5, 2019
5YKD
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BU of 5ykd by Molmil
Crystal structure of dihydropyrimidinase from Pseudomonas aeruginosa PAO1 at 2.17 angstrom resolution
分子名称: D-hydantoinase/dihydropyrimidinase, ZINC ION
著者Huang, Y.H, Huang, C.Y.
登録日2017-10-14
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural Basis for pH-Dependent Oligomerization of Dihydropyrimidinase fromPseudomonas aeruginosaPAO1.
Bioinorg Chem Appl, 2018, 2018
6AJD
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BU of 6ajd by Molmil
Crystal structure of a monometallic dihydropyrimidinase from Pseudomonas aeruginosa PAO1 reveals no lysine carbamylation within the active site
分子名称: D-hydantoinase/dihydropyrimidinase, ZINC ION
著者Huang, Y.H, Huang, C.Y.
登録日2018-08-27
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.223 Å)
主引用文献Crystal structures of monometallic dihydropyrimidinase and the human dihydroorotase domain K1556A mutant reveal no lysine carbamylation within the active site
Biochem. Biophys. Res. Commun., 505, 2018
4M6B
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BU of 4m6b by Molmil
Crystal structure of yeast Swr1-Z domain in complex with H2A.Z-H2B dimer
分子名称: Chimera protein of Histone H2B.1 and Histone H2A.Z, Helicase SWR1
著者Hong, J.J, Feng, H.Q, Wang, F, Ranjan, A, Chen, J.H, Jiang, J.S, Girlando, R, Xiao, T.S, Wu, C, Bai, Y.W.
登録日2013-08-09
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer.
Mol.Cell, 53, 2014
4I3V
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BU of 4i3v by Molmil
Structure of phosphonoacetaldehyde dehydrogenase in complex with phosphonoacetaldehyde and cofactor NAD+
分子名称: Aldehyde dehydrogenase (NAD+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHONOACETALDEHYDE
著者Nair, S.K, Agarwal, V.
登録日2012-11-26
公開日2013-11-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and function of phosphonoacetaldehyde dehydrogenase: the missing link in phosphonoacetate formation.
Chem.Biol., 21, 2014
4I3W
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BU of 4i3w by Molmil
Structure of phosphonoacetaldehyde dehydrogenase in complex with gylceraldehyde-3-phosphate and cofactor NAD+
分子名称: Aldehyde dehydrogenase (NAD+), GLYCERALDEHYDE-3-PHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Nair, S.K, Agarwal, V.
登録日2012-11-26
公開日2013-11-27
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structure and function of phosphonoacetaldehyde dehydrogenase: the missing link in phosphonoacetate formation.
Chem.Biol., 21, 2014
4I3T
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BU of 4i3t by Molmil
Structure of phosphonoacetaldehyde dehydrogenase in the apo state
分子名称: Aldehyde dehydrogenase (NAD+), PHOSPHATE ION
著者Nair, S.K, Agarwal, V.
登録日2012-11-26
公開日2013-11-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and function of phosphonoacetaldehyde dehydrogenase: the missing link in phosphonoacetate formation.
Chem.Biol., 21, 2014
4I3X
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BU of 4i3x by Molmil
Structure of phosphonoacetaldehyde dehydrogenase in complex with phosphonoacetate and cofactor NAD+
分子名称: Aldehyde dehydrogenase (NAD+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHONOACETIC ACID
著者Nair, S.K, Agarwal, V.
登録日2012-11-26
公開日2013-11-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structure and function of phosphonoacetaldehyde dehydrogenase: the missing link in phosphonoacetate formation.
Chem.Biol., 21, 2014
4I3U
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BU of 4i3u by Molmil
Structure of phosphonoacetaldehyde dehydrogenase in complex with phosphonoacetaldehyde
分子名称: Aldehyde dehydrogenase (NAD+), PHOSPHONOACETALDEHYDE
著者Nair, S.K, Agarwal, V.
登録日2012-11-26
公開日2013-11-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and function of phosphonoacetaldehyde dehydrogenase: the missing link in phosphonoacetate formation.
Chem.Biol., 21, 2014
6O6K
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BU of 6o6k by Molmil
HUaa 19bp SYM DNA pH 5.5
分子名称: DNA (5'-D(P*AP*TP*TP*TP*CP*AP*TP*GP*AP*T)-3'), DNA (5'-D(P*CP*AP*TP*CP*AP*TP*GP*AP*AP*A)-3'), DNA-binding protein HU-alpha
著者Remesh, S.G, Hammel, M.
登録日2019-03-06
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.601 Å)
主引用文献Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Nat Commun, 11, 2020

 

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