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1YD9
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BU of 1yd9 by Molmil
1.6A Crystal Structure of the Non-Histone Domain of the Histone Variant MacroH2A1.1.
分子名称: Core histone macro-H2A.1, GOLD ION
著者Chakravarthy, S, Swamy, G.Y.S.K, Caron, C, Perche, P.Y, Pehrson, J.R, Khochbin, S, Luger, K.
登録日2004-12-23
公開日2005-09-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural characterization of the histone variant macroH2A
Mol.Cell.Biol., 25, 2005
1U35
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BU of 1u35 by Molmil
Crystal structure of the nucleosome core particle containing the histone domain of macroH2A
分子名称: H2A histone family, Hist1h4i protein, Histone H3.1, ...
著者Chakravarthy, S, Gundimella, S.K, Caron, C, Perche, P.Y, Pehrson, J.R, Khochbin, S, Luger, K.
登録日2004-07-20
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural characterization of the histone variant macroH2A.
Mol.Cell.Biol., 25, 2005
2F8N
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BU of 2f8n by Molmil
2.9 Angstrom X-ray structure of hybrid macroH2A nucleosomes
分子名称: Core histone macro-H2A.1, Histone 3, H2ba, ...
著者Chakravarthy, S, Luger, K.
登録日2005-12-02
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Nucleosomes containing the histone domain of macroH2A: In vitro possibilities.
To be Published
2NQB
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BU of 2nqb by Molmil
Drosophila Nucleosome Structure
分子名称: Histone H2A, Histone H2B, Histone H3, ...
著者Luger, K, Chakravarthy, S.
登録日2006-10-30
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Comparative analysis of nucleosome structures from different species.
To be Published
6NXI
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BU of 6nxi by Molmil
Flavin Transferase ApbE from Vibrio cholerae
分子名称: 1,2-ETHANEDIOL, FAD:protein FMN transferase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Osipiuk, J, Fang, X, Chakravarthy, S, Juarez, O, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-02-08
公開日2019-03-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Conserved residue His-257 ofVibrio choleraeflavin transferase ApbE plays a critical role in substrate binding and catalysis.
J.Biol.Chem., 294, 2019
6NXJ
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Flavin Transferase ApbE from Vibrio cholerae, H257G mutant
分子名称: FAD:protein FMN transferase, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
著者Osipiuk, J, Fang, X, Chakravarthy, S, Juarez, O, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-02-08
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Conserved residue His-257 ofVibrio choleraeflavin transferase ApbE plays a critical role in substrate binding and catalysis.
J.Biol.Chem., 294, 2019
5VHG
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BU of 5vhg by Molmil
Crystal structure of pentad mutant GAPR-1
分子名称: Golgi-associated plant pathogenesis-related protein 1, SULFATE ION
著者Li, Y, Zhao, Y, Su, M, Chakravarthy, S, Colbert, C.L, Levine, B, Sinha, S.C.
登録日2017-04-13
公開日2017-09-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Structural insights into the interaction of the conserved mammalian proteins GAPR-1 and Beclin 1, a key autophagy protein.
Acta Crystallogr D Struct Biol, 73, 2017
4C0J
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BU of 4c0j by Molmil
Crystal structure of Drosophila Miro EF hand and cGTPase domains in the apo state (Apo-MiroS)
分子名称: L-HOMOSERINE, MITOCHONDRIAL RHO GTPASE, SODIUM ION, ...
著者Klosowiak, J.L, Focia, P.J, Wawrzak, Z, Chakravarthy, S, Landahl, E.C, Freymann, D.M, Rice, S.E.
登録日2013-08-05
公開日2013-10-09
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Structural Coupling of the EF Hand and C-Terminal Gtpase Domains in the Mitochondrial Protein Miro.
Embo Rep., 14, 2013
4C0K
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BU of 4c0k by Molmil
Crystal structure of Drosophila Miro EF hand and cGTPase domains bound to one calcium ion (Ca-MiroS)
分子名称: CALCIUM ION, L-HOMOSERINE, MITOCHONDRIAL RHO GTPASE, ...
著者Klosowiak, J.L, Focia, P.J, Wawrzak, Z, Chakravarthy, S, Landahl, E.C, Freymann, D.M, Rice, S.E.
登録日2013-08-05
公開日2013-10-09
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structural Coupling of the EF Hand and C-Terminal Gtpase Domains in the Mitochondrial Protein Miro.
Embo Rep., 14, 2013
4C0L
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BU of 4c0l by Molmil
Crystal structure of Drosophila Miro EF hand and cGTPase domains bound to one magnesium ion and Mg:GDP (MgGDP-MiroS)
分子名称: GUANOSINE-5'-DIPHOSPHATE, L-HOMOSERINE, MAGNESIUM ION, ...
著者Klosowiak, J.L, Focia, P.J, Wawrzak, Z, Chakravarthy, S, Landahl, E.C, Freymann, D.M, Rice, S.E.
登録日2013-08-05
公開日2013-10-09
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Coupling of the EF Hand and C-Terminal Gtpase Domains in the Mitochondrial Protein Miro.
Embo Rep., 14, 2013
5KN9
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BU of 5kn9 by Molmil
MutY N-terminal domain in complex with DNA containing an intrahelical oxoG:A base-pair
分子名称: Adenine DNA glycosylase, CALCIUM ION, DNA (5'-D(*AP*GP*CP*AP*CP*AP*GP*GP*AP*T)-3'), ...
著者Wang, L, Chakravarthy, S, Verdine, G.L.
登録日2016-06-27
公開日2017-02-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural Basis for the Lesion-scanning Mechanism of the MutY DNA Glycosylase.
J. Biol. Chem., 292, 2017
5KN8
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BU of 5kn8 by Molmil
MutY N-terminal domain in complex with undamaged DNA
分子名称: Adenine DNA glycosylase, CALCIUM ION, DNA (5'-D(*AP*GP*CP*AP*CP*AP*GP*GP*AP*T)-3'), ...
著者Wang, L, Chakravarthy, S, Verdine, G.L.
登録日2016-06-27
公開日2017-02-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural Basis for the Lesion-scanning Mechanism of the MutY DNA Glycosylase.
J. Biol. Chem., 292, 2017
4MN3
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BU of 4mn3 by Molmil
Chromodomain antagonists that target the polycomb-group methyllysine reader protein Chromobox homolog 7 (CBX7)
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Chromobox protein homolog 7, ...
著者Chakravarthi, S, Daze, K, Douglas, S, Quon, T, Dev, A, Peng, F, Heller, M, Boulanger, M.J, Wulff, J, Hof, F.
登録日2013-09-09
公開日2014-04-02
最終更新日2014-10-08
実験手法X-RAY DIFFRACTION (1.542 Å)
主引用文献Chromodomain Antagonists That Target the Polycomb-Group Methyllysine Reader Protein Chromobox Homolog 7 (CBX7).
J.Med.Chem., 57, 2014
6U3E
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BU of 6u3e by Molmil
Best fitting antiparallel model for Volume 1 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
分子名称: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
著者Das, S, Lambright, D.G.
登録日2019-08-21
公開日2019-09-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (53 Å)
主引用文献Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
6D71
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BU of 6d71 by Molmil
Crystal Structure of the Human Miro1 N-terminal GTPase bound to GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mitochondrial Rho GTPase 1
著者Smith, K.P, Focia, P.J, Rice, S.E, Freymann, D.M.
登録日2018-04-23
公開日2019-10-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.7180779 Å)
主引用文献Insight into human Miro1/2 domain organization based on the structure of its N-terminal GTPase.
J.Struct.Biol., 212, 2020
5EFM
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BU of 5efm by Molmil
Beclin 1 Flexible-helical Domian (FHD) (141-171)
分子名称: Beclin-1, SULFATE ION
著者Sinha, S, Mei, Y.
登録日2015-10-23
公開日2016-07-20
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Conformational Flexibility Enables the Function of a BECN1 Region Essential for Starvation-Mediated Autophagy.
Biochemistry, 55, 2016
4RKK
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BU of 4rkk by Molmil
Structure of a product bound phosphatase
分子名称: Laforin, PHOSPHATE ION, alpha-D-glucopyranose, ...
著者Vander Kooi, C.W.
登録日2014-10-13
公開日2015-01-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural mechanism of laforin function in glycogen dephosphorylation and lafora disease.
Mol.Cell, 57, 2015
7N88
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BU of 7n88 by Molmil
The cryoEM structure of LbpB from N. gonorrhoeae in complex with lactoferrin
分子名称: BICARBONATE ION, FE (III) ION, Lactoferrin-binding protein B, ...
著者Yadav, R, Noinaj, N.
登録日2021-06-14
公開日2021-12-01
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insight into the dual function of LbpB in mediating Neisserial pathogenesis.
Elife, 10, 2021
5HHE
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BU of 5hhe by Molmil
Human Beclin 1 coiled-coil domain
分子名称: Beclin-1
著者Mei, Y, Sinha, S.
登録日2016-01-10
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Identification of BECN1 and ATG14 Coiled-Coil Interface Residues That Are Important for Starvation-Induced Autophagy.
Biochemistry, 55, 2016
6X6N
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BU of 6x6n by Molmil
NMR structure of the putative GTPase-Activating (GAP) domain of VopE
分子名称: Outer membrane virulence protein yopE
著者Smith, K.P, Lee, W, Tonelli, M.
登録日2020-05-28
公開日2021-12-22
最終更新日2024-05-15
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Solution structure and dynamics of the mitochondrial-targeted GTPase-activating protein (GAP) VopE by an integrated NMR/SAXS approach.
Protein Sci., 31, 2022
6POO
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BU of 6poo by Molmil
Novel structure of the N-terminal helical domain of BibA, a group B streptococcus immunogenic bacterial adhesin
分子名称: BibA
著者Manne, K, Narayana, S.V.
登録日2019-07-04
公開日2020-08-12
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Novel structure of the N-terminal helical domain of BibA, a group B streptococcus immunogenic bacterial adhesin.
Acta Crystallogr D Struct Biol, 76, 2020
6BBP
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BU of 6bbp by Molmil
Model for compact volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A 6GS Arf6 Q67L fusion protein
分子名称: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
著者Das, S, Malaby, A.W, Lambright, D.G.
登録日2017-10-19
公開日2018-01-10
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
6BBQ
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BU of 6bbq by Molmil
Model for extended volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A Arf6 Q67L fusion protein
分子名称: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
著者Das, S, Malaby, A.W, Lambright, D.G.
登録日2017-10-19
公開日2018-01-10
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
4ZIA
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BU of 4zia by Molmil
Crystal Structure of STAT3 N-terminal domain
分子名称: FORMIC ACID, MAGNESIUM ION, NICKEL (II) ION, ...
著者Hu, T, Chopra, R.
登録日2015-04-28
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Impact of the N-Terminal Domain of STAT3 in STAT3-Dependent Transcriptional Activity.
Mol.Cell.Biol., 35, 2015
6U3G
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BU of 6u3g by Molmil
Best fitting antiparallel model for Volume 2 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
分子名称: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
著者Das, S, Lambright, D.G.
登録日2019-08-21
公開日2019-09-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (53 Å)
主引用文献Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019

 

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