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7ABB
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BU of 7abb by Molmil
The truncated structure of the Bottromycin biosynthetic protein SalCYP
分子名称: HEME C, SalCYP truncation
著者Adam, S, Koehnke, J.
登録日2020-09-07
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.50004339 Å)
主引用文献Characterization of the Stereoselective P450 Enzyme BotCYP Enables the In Vitro Biosynthesis of the Bottromycin Core Scaffold.
J.Am.Chem.Soc., 142, 2020
8A8Y
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BU of 8a8y by Molmil
Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae
分子名称: 1-deoxy-D-xylulose-5-phosphate synthase
著者Adam, S, Hirsch, A.
登録日2022-06-24
公開日2023-07-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.10000443 Å)
主引用文献Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae
To Be Published
8A2N
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BU of 8a2n by Molmil
Structure of crocagin biosynthetic protein CgnD
分子名称: CgnD, SULFATE ION
著者Adam, S, Koehnke, J.
登録日2022-06-06
公開日2023-02-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis.
Nat.Chem., 15, 2023
8A9C
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BU of 8a9c by Molmil
Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae in complex with cofactor TPP
分子名称: 1-deoxy-D-xylulose-5-phosphate synthase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
著者Adam, S, Hirsch, A.
登録日2022-06-28
公開日2023-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae in complex with cofactor TPP
To Be Published
6I86
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BU of 6i86 by Molmil
Crocagin biosynthetic gene J
分子名称: GLYCEROL, Uncharacterized protein
著者Adam, S, Koehnke, J.
登録日2018-11-19
公開日2019-03-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of CgnJ, a domain of unknown function protein from the crocagin gene cluster.
Acta Crystallogr.,Sect.F, 75, 2019
7ABA
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BU of 7aba by Molmil
The structure of the Bottromycin biosynthetic protein SalCYP
分子名称: HEME C, SalCYP
著者Adam, S, Koehnke, J.
登録日2020-09-07
公開日2020-12-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.85002315 Å)
主引用文献Characterization of the Stereoselective P450 Enzyme BotCYP Enables the In Vitro Biosynthesis of the Bottromycin Core Scaffold.
J.Am.Chem.Soc., 142, 2020
6ZSU
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BU of 6zsu by Molmil
Structure of crocagin biosynthetic protein CgnE
分子名称: CgnE
著者Adam, S, Koehnke, J.
登録日2020-07-16
公開日2022-07-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis.
Nat.Chem., 15, 2023
8AHD
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BU of 8ahd by Molmil
The apo structure of the Corramycin phosphotransferase
分子名称: Corramycin phosphotransferase, GLYCEROL
著者Adam, S, Mueller, R, Koehnke, J.
登録日2022-07-21
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The apo structure of the Corramycin phosphotransferase
To Be Published
8AGY
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BU of 8agy by Molmil
The Corramycin phosphotransferase in complex with Corramycin
分子名称: ABCD, Corramycin phosphotransferase, GLYCEROL
著者Adam, S, Mueller, R, Koehnke, J.
登録日2022-07-20
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Corramycin phosphotransferase in complex with Corramycin
To Be Published
6Z8L
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BU of 6z8l by Molmil
Alpha-Amylase in complex with probe fragments
分子名称: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase, ...
著者Adam, S, Koehnke, J.
登録日2020-06-02
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.40000367 Å)
主引用文献Enhancing glycan stability via site-selective fluorination: modulating substrate orientation by molecular design.
Chem Sci, 12, 2020
6ZSV
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BU of 6zsv by Molmil
Structure of crocagin biosynthetic protein CgnB
分子名称: Uncharacterized protein, ZINC ION
著者Koehnke, J, Adam, S.
登録日2020-07-16
公開日2022-07-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis.
Nat.Chem., 15, 2023
6TET
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BU of 6tet by Molmil
The structure of CYP121 in complex with inhibitor L21
分子名称: 1,2-ETHANEDIOL, 1-[(~{E})-3-[4-(4-fluorophenyl)phenyl]prop-2-enyl]imidazole, Mycocyclosin synthase, ...
著者Adam, S, Koehnke, J.
登録日2019-11-12
公開日2021-05-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.49986887 Å)
主引用文献Structure-Activity Relationship and Mode-Of-Action Studies Highlight 1-(4-Biphenylylmethyl)-1H-imidazole-Derived Small Molecules as Potent CYP121 Inhibitors.
Chemmedchem, 16, 2021
6TEV
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BU of 6tev by Molmil
The structure of CYP121 in complex with inhibitor L44
分子名称: 1,2-ETHANEDIOL, 1-[[4-[4-(trifluoromethyl)phenyl]phenyl]methyl]imidazole, Mycocyclosin synthase, ...
著者Adam, S, Koehnke, J.
登録日2019-11-12
公開日2021-05-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.70001268 Å)
主引用文献Structure-Activity Relationship and Mode-Of-Action Studies Highlight 1-(4-Biphenylylmethyl)-1H-imidazole-Derived Small Molecules as Potent CYP121 Inhibitors.
Chemmedchem, 16, 2021
6TE7
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BU of 6te7 by Molmil
The structure of CYP121 in complex with inhibitor S2
分子名称: 1,2-ETHANEDIOL, 2-chloranyl-4-[4-[(1~{R})-1-imidazol-1-ylprop-2-enyl]phenyl]phenol, Mycocyclosin synthase, ...
著者Adam, S, Koehnke, J.
登録日2019-11-11
公開日2021-05-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.50001824 Å)
主引用文献Structure-Activity Relationship and Mode-Of-Action Studies Highlight 1-(4-Biphenylylmethyl)-1H-imidazole-Derived Small Molecules as Potent CYP121 Inhibitors.
Chemmedchem, 16, 2021
1FBZ
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BU of 1fbz by Molmil
Structure-based design of a novel, osteoclast-selective, nonpeptide Src SH2 inhibitor with in vivo anti-resorptive activity
分子名称: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE LCK, {4-[2-ACETYLAMINO-2-(3-CARBAMOYL-2-CYCLOHEXYLMETHOXY-6,7,8,9-TETRAHYDRO-5H-BENZOCYCLOHEPTEN-5YLCARBAMOYL)-ETHYL]-2-PHOSPHONO-PHENYL}-PHOSPHONIC ACID
著者Shakespeare, W, Yang, M, Bohacek, R, Cerasoli, F, Stebbis, K, Sundaramoorthi, R, Vu, C, Pradeepan, S, Metcalf, C, Haraldson, C, Merry, T, Dalgarno, D, Narula, S, Hatada, M, Lu, X, Van Schravendijk, M.R, Adams, S, Violette, S, Smith, J, Guan, W, Bartlett, C, Herson, J, Iuliucci, J, Weigele, M, Sawyer, T.
登録日2000-07-17
公開日2000-08-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-based design of an osteoclast-selective, nonpeptide src homology 2 inhibitor with in vivo antiresorptive activity.
Proc.Natl.Acad.Sci.Usa, 97, 2000
8A29
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BU of 8a29 by Molmil
Apo 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa
分子名称: 1-deoxy-D-xylulose-5-phosphate synthase, CALCIUM ION, CHLORIDE ION, ...
著者Hamid, R, Adam, S, Lacour, A, Monjas, L, Hirsch, A.
登録日2022-06-02
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献1-deoxy-D-xylulose-5-phosphate synthase from Pseudomonas aeruginosa and Klebsiella pneumoniae reveals conformational changes upon cofactor binding.
J.Biol.Chem., 299, 2023
5LHK
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BU of 5lhk by Molmil
Bottromycin maturation enzyme BotP in complex with Mn
分子名称: BICARBONATE ION, Leucine aminopeptidase 2, chloroplastic, ...
著者Koehnke, J, Adam, S.
登録日2016-07-12
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structure and Substrate Recognition of the Bottromycin Maturation Enzyme BotP.
Chembiochem, 17, 2016
1Y7V
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BU of 1y7v by Molmil
X-ray structure of human acid-beta-glucosidase covalently bound to conduritol B epoxide
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glucosylceramidase, ...
著者Premkumar, L, Sawkar, A.R, Boldin-Adamsky, S, Toker, L, Silman, I, Kelly, J.W, Futerman, A.H, Sussman, J.L, Israel Structural Proteomics Center (ISPC)
登録日2004-12-10
公開日2005-04-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray structure of human acid-beta-glucosidase covalently bound to conduritol-B-epoxide. Implications for Gaucher disease.
J.Biol.Chem., 280, 2005
6W8W
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BU of 6w8w by Molmil
Crystal structure of mouse DNMT1 in complex with CCG DNA
分子名称: CCG DNA (5'-D(*AP*CP*TP*TP*AP*(5CM)P*GP*GP*AP*AP*GP*G)-3'), CCG DNA (5'-D(*CP*CP*TP*TP*CP*(C49)P*GP*TP*AP*AP*GP*T)-3'), DNA (cytosine-5)-methyltransferase 1, ...
著者Anteneh, H, Song, J.
登録日2020-03-21
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献DNMT1 activity, base flipping mechanism and genome-wide DNA methylation are regulated by the DNA sequence context
Nat Commun, 2020
6W8V
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BU of 6w8v by Molmil
Crystal structure of mouse DNMT1 in complex with ACG DNA
分子名称: ACG DNA (5'-D(*AP*CP*TP*TP*AP*(C49)P*GP*GP*AP*AP*GP*G)-3'), ACG DNA (5'-D(*CP*CP*TP*TP*CP*(5CM)P*GP*TP*AP*AP*GP*T)-3'), DNA (cytosine-5)-methyltransferase 1, ...
著者Anteneh, H, Song, J.
登録日2020-03-21
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献DNMT1 activity, base flipping mechanism and genome-wide DNA methylation are regulated by the DNA sequence context
Nat Commun, 2020
7PD7
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BU of 7pd7 by Molmil
Crocagin methyl transferase CgnL
分子名称: GLYCEROL, Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Zheng, D, Koehnke, J.
登録日2021-08-04
公開日2022-08-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis.
Nat.Chem., 15, 2023
2BDJ
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BU of 2bdj by Molmil
Src kinase in complex with inhibitor AP23464
分子名称: 3-[2-(2-CYCLOPENTYL-6-{[4-(DIMETHYLPHOSPHORYL)PHENYL]AMINO}-9H-PURIN-9-YL)ETHYL]PHENOL, Proto-oncogene tyrosine-protein kinase Src
著者Dalgarno, D, Stehle, T, Schelling, P, Narula, S, Sawyer, T.
登録日2005-10-20
公開日2006-10-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of Src tyrosine kinase inhibition with a new class of potent and selective trisubstituted purine-based compounds.
Chem.Biol.Drug Des., 67, 2006
2BDF
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BU of 2bdf by Molmil
Src kinase in complex with inhibitor AP23451
分子名称: Proto-oncogene tyrosine-protein kinase Src, {[(4-{[2-(4-AMINOCYCLOHEXYL)-9-ETHYL-9H-PURIN-6-YL]AMINO}PHENYL)(HYDROXY)PHOSPHORYL]METHYL}PHOSPHONIC ACID
著者Dalgarno, D, Stehle, T, Schelling, P, Sawyer, T, Narula, S.
登録日2005-10-20
公開日2006-10-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of Src tyrosine kinase inhibition with a new class of potent and selective trisubstituted purine-based compounds.
Chem.Biol.Drug Des., 67, 2006
6T6H
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BU of 6t6h by Molmil
Apo structure of the Bottromycin epimerase BotH
分子名称: BotH, SODIUM ION, SULFATE ION
著者Koehnke, J, Sikandar, A.
登録日2019-10-18
公開日2020-07-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes.
Nat.Chem.Biol., 16, 2020
2VT0
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BU of 2vt0 by Molmil
X-ray structure of a conjugate with conduritol-beta-epoxide of acid-beta-glucosidase overexpressed in cultured plant cells
分子名称: (1R,2R,3S,4S,5S,6S)-CYCLOHEXANE-1,2,3,4,5,6-HEXOL, GLUCOSYLCERAMIDASE, SULFATE ION, ...
著者Brumshtein, B, Greenblatt, H.M, Shaaltiel, Y, Aviezer, D, Silman, I, Futerman, A.H, Sussman, J.L.
登録日2008-05-03
公開日2008-09-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Acid Beta-Glucosidase: Insights from Structural Analysis and Relevance to Gaucher Disease Therapy.
Biol.Chem., 389, 2008

 

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