Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5X6C
DownloadVisualize
BU of 5x6c by Molmil
Crystal structure of SepRS-SepCysE from Methanocaldococcus jannaschii
分子名称: ADENOSINE-5'-TRIPHOSPHATE, O-phosphoserine--tRNA(Cys) ligase, SULFATE ION, ...
著者Chen, M, Kato, K, Yao, M.
登録日2017-02-21
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
5X6B
DownloadVisualize
BU of 5x6b by Molmil
Crystal structure of SepCysE-SepCysS in complex with tRNACys from Methanocaldococcus jannaschii
分子名称: O-phospho-L-seryl-tRNA:Cys-tRNA synthase, Uncharacterized protein MJ1481, tRNACys
著者Chen, M, Kato, K, Yao, M.
登録日2017-02-21
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.596 Å)
主引用文献Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
8HNQ
DownloadVisualize
BU of 8hnq by Molmil
The structure of a alcohol dehydrogenase AKR13B2 with NADP
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Chen, M, Yang, H, Lu, F.
登録日2022-12-08
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of AKR13B2
To Be Published
8HW0
DownloadVisualize
BU of 8hw0 by Molmil
the structure of AKR6D1
分子名称: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-dependent aldo/keto reductase AKR6D1
著者Chen, M, Yang, H.
登録日2022-12-28
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献structure of AKR6D1
To Be Published
7PTY
DownloadVisualize
BU of 7pty by Molmil
Delta-latroinsectotoxin dimer
分子名称: Delta-latroinsectotoxin-Lt1a
著者Chen, M, Gatsogiannis, C.
登録日2021-09-27
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (4.63 Å)
主引用文献Molecular architecture of black widow spider neurotoxins.
Nat Commun, 12, 2021
7PTX
DownloadVisualize
BU of 7ptx by Molmil
Alpha-latrocrustotoxin monomer
分子名称: Alpha-latrocrustotoxin-Lt1a
著者Chen, M, Gatsogiannis, C.
登録日2021-09-27
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Molecular architecture of black widow spider neurotoxins.
Nat Commun, 12, 2021
6L9F
DownloadVisualize
BU of 6l9f by Molmil
Crystal structure of TEAD4 in complex with a novel FAM181A peptide
分子名称: ACETATE ION, Protein FAM181A, Transcriptional enhancer factor TEF-3
著者Chen, M, Zhou, Z.
登録日2019-11-09
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.555 Å)
主引用文献Crystal structure of TEAD4 in complex with a novel FAM181A peptide
To be published
6TCL
DownloadVisualize
BU of 6tcl by Molmil
Photosystem I tetramer
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Chen, M, Perez-Boerema, A, Li, S, Amunts, A.
登録日2019-11-06
公開日2020-02-19
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Distinct structural modulation of photosystem I and lipid environment stabilizes its tetrameric assembly.
Nat.Plants, 6, 2020
5B4E
DownloadVisualize
BU of 5b4e by Molmil
Sulfur Transferase TtuA in complex with iron sulfur cluster and ATP derivative
分子名称: IRON/SULFUR CLUSTER, ISOPROPYL ALCOHOL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Chen, M, Narai, S, Tanaka, Y, Yao, M.
登録日2016-04-03
公開日2017-05-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.698 Å)
主引用文献Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5B4F
DownloadVisualize
BU of 5b4f by Molmil
Sulfur Transferase TtuA in complex with iron sulfur cluster
分子名称: IRON/SULFUR CLUSTER, SULFATE ION, Sulfur Transferase TtuA, ...
著者Chen, M, Narai, S, Tanaka, Y, Yao, M.
登録日2016-04-03
公開日2017-05-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5GHA
DownloadVisualize
BU of 5gha by Molmil
Sulfur Transferase TtuA in complex with Sulfur Carrier TtuB
分子名称: 1,2-ETHANEDIOL, SULFATE ION, Sulfur Carrier TtuB, ...
著者Chen, M, Narai, S, Tanaka, Y, Yao, M.
登録日2016-06-19
公開日2017-05-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8TAT
DownloadVisualize
BU of 8tat by Molmil
CRYSTAL STRUCTURE OF R9A SPIN LABELED T4 LYSOZYME MUTANT K65R9A/R76R9A
分子名称: Endolysin, methyl 1-hydroxy-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrole-3-carboxylate, radical
著者Chen, M, Hubbell, W.L, Cascio, D.
登録日2023-06-27
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Highly Ordered Nitroxide Side Chain for Distance Mapping and Monitoring Slow Structural Fluctuations in Proteins.
Appl.Magn.Reson., 55, 2024
8U2C
DownloadVisualize
BU of 8u2c by Molmil
Gaussian mixture model based single particle refinement - ABC transporter (inhibitor-bound ABCG2 from EMPIAR-10374)
分子名称: 5D3 Fab heavy chain variable domain, 5D3 Fab light chain variable domain, Broad substrate specificity ATP-binding cassette transporter ABCG2, ...
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
8U28
DownloadVisualize
BU of 8u28 by Molmil
Gaussian mixture model based single particle refinement - SARS (SARS-CoV-2 Spike Proteins on intact virions from EMPIAR-10492)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
8U26
DownloadVisualize
BU of 8u26 by Molmil
Gaussian Mixture Models based single particle refinement - GPCR (Substance P bound to active human neurokinin 1 receptor in complex with miniGs399 from EMPIAR-10786)
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
3W9Z
DownloadVisualize
BU of 3w9z by Molmil
Crystal structure of DusC
分子名称: FLAVIN MONONUCLEOTIDE, tRNA-dihydrouridine synthase C
著者Chen, M, Yu, J, Tanaka, Y, Tanaka, I, Yao, M.
登録日2013-04-19
公開日2013-07-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of dihydrouridine synthase C (DusC) from Escherichia coli
Acta Crystallogr.,Sect.F, 69, 2013
4KWD
DownloadVisualize
BU of 4kwd by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with (1R,8R,9aS)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
分子名称: (1R,5R,8R,9aS)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Al-lami, N, Janvier, M, D'Antonio, E.L, Faraldos, J.A, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-23
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.857 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
4KVD
DownloadVisualize
BU of 4kvd by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with (4aS,7S)-1,4a-dimethyl-7-(prop-1-en-2-yl)decahydroquinolin-1-ium
分子名称: (1R,4aS,7S,8aR)-1,4a-dimethyl-7-(prop-1-en-2-yl)decahydroquinolinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Faraldos, J.A, Al-lami, N, Janvier, M, D'Antonio, E.L, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-22
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
4KVI
DownloadVisualize
BU of 4kvi by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with (4aS,7S)-4a-methyl-7-(prop-1-en-2-yl)-2,3,4,4a,5,6,7,8-octahydroquinolin-1-ium
分子名称: (4aS,7S)-4a-methyl-7-(prop-1-en-2-yl)-2,3,4,4a,5,6,7,8-octahydroquinolinium, Aristolochene synthase, MAGNESIUM ION, ...
著者Chen, M, Faraldos, J.A, Al-lami, N, Janvier, M, D'Antonio, E.L, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-22
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
4KVW
DownloadVisualize
BU of 4kvw by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with (3R,6R,9aR)-6,9a-dimethyl-3-(prop-1-en-2-yl)decahydroquinolizin-5-ium
分子名称: (3R,5S,6R,9aR)-6,9a-dimethyl-3-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Al-lami, N, Janvier, M, D'Antonio, E.L, Faraldos, J.A, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-23
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
4KUX
DownloadVisualize
BU of 4kux by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with farnesyl thiolodiphosphate (FSPP)
分子名称: Aristolochene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Chen, M, Faraldos, J.A, Al-lami, N, Janvier, M, D'Antonio, E.L, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-22
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
4KVY
DownloadVisualize
BU of 4kvy by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
分子名称: (1S,5S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Al-lami, N, Janvier, M, D'Antonio, E.L, Faraldos, J.A, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-23
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
8SOI
DownloadVisualize
BU of 8soi by Molmil
Structure of human ULK1 complex core (2:1:1 stoichiometry)
分子名称: Autophagy-related protein 13, RB1-inducible coiled-coil protein 1, Serine/threonine-protein kinase ULK1
著者Chen, M, Hurley, J.H.
登録日2023-04-28
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
8SRM
DownloadVisualize
BU of 8srm by Molmil
Structure of human ULK1 complex core (2:2:2 stoichiometry) of the ATG13(450-517) mutant
分子名称: Autophagy-related protein 13, RB1-inducible coiled-coil protein 1, Serine/threonine-protein kinase ULK1
著者Chen, M, Hurley, J.H.
登録日2023-05-05
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (4.46 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv
8SOR
DownloadVisualize
BU of 8sor by Molmil
Structure of human PI3KC3-C1 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Beclin 1-associated autophagy-related key regulator, Beclin-1, ...
著者Chen, M, Hurley, J.H.
登録日2023-04-29
公開日2023-06-21
最終更新日2023-06-28
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon