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7FBL
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BU of 7fbl by Molmil
Thrombocorticin in complex with Ca2+ and mannose
分子名称: CALCIUM ION, Thrombocorticin, alpha-D-mannopyranose
著者Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y.
登録日2021-07-11
公開日2022-07-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.419 Å)
主引用文献A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation.
Nat Commun, 13, 2022
5X52
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BU of 5x52 by Molmil
Human serum albumin complexed with octanoate and N-acetyl-L-methionine
分子名称: N-ACETYLMETHIONINE, OCTANOIC ACID (CAPRYLIC ACID), PHOSPHATE ION, ...
著者Kawai, A, Otagiri, M.
登録日2017-02-14
公開日2017-05-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.005 Å)
主引用文献Crystallographic analysis of the ternary complex of octanoate and N-acetyl-l-methionine with human serum albumin reveals the mode of their stabilizing interactions
Biochim. Biophys. Acta, 1865, 2017
5YO8
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BU of 5yo8 by Molmil
Crystal structure of beta-C25/C30/C35-prene synthase
分子名称: Tetraprenyl-beta-curcumene synthase
著者Fujihashi, M, Miki, K.
登録日2017-10-27
公開日2018-05-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structure and functional analysis of large-terpene synthases belonging to a newly found subclass.
Chem Sci, 9, 2018
1CC0
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BU of 1cc0 by Molmil
CRYSTAL STRUCTURE OF THE RHOA.GDP-RHOGDI COMPLEX
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, rho GDP dissociation inhibitor alpha, ...
著者Longenecker, K.L, Read, P, Derewenda, U, Dauter, Z, Garrard, S, Walker, L, Somlyo, A.V, Somlyo, A.P, Nakamoto, R.K, Derewenda, Z.S.
登録日1999-03-03
公開日2000-01-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献How RhoGDI binds Rho.
Acta Crystallogr.,Sect.D, 55, 1999
5ZC6
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BU of 5zc6 by Molmil
Solution structure of H-RasT35S mutant protein in complex with KBFM123
分子名称: 3-oxidanyl-~{N}-[[(2~{R})-oxolan-2-yl]methyl]naphthalene-2-carboxamide, GTPase HRas, MAGNESIUM ION, ...
著者Matsumoto, S, Hayashi, Y, Hiraga, T, Matsuo, K, Kataoka, T.
登録日2018-02-15
公開日2018-09-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Molecular Basis for Allosteric Inhibition of GTP-Bound H-Ras Protein by a Small-Molecule Compound Carrying a Naphthalene Ring
Biochemistry, 57, 2018
5B3H
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BU of 5b3h by Molmil
The crystal structure of the JACKDAW/IDD10 bound to the heterodimeric SHR-SCR complex
分子名称: Protein SCARECROW, Protein SHORT-ROOT, ZINC ION, ...
著者Hirano, Y, Suyama, T, Nakagawa, M, Hakoshima, T.
登録日2016-02-29
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017
5B3G
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BU of 5b3g by Molmil
The crystal structure of the heterodimer of SHORT-ROOT and SCARECROW GRAS domains
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
著者Hirano, Y, Nakagawa, M, Hakoshima, T.
登録日2016-02-29
公開日2017-03-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017
1J10
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BU of 1j10 by Molmil
beta-amylase from Bacillus cereus var. mycoides in complex with GGX
分子名称: Beta-amylase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-xylopyranose, ...
著者Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
登録日2002-11-25
公開日2003-06-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J11
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BU of 1j11 by Molmil
beta-amylase from Bacillus cereus var. mycoides in complex with alpha-EPG
分子名称: (2R)-oxiran-2-ylmethyl alpha-D-glucopyranoside, Beta-amylase, CALCIUM ION
著者Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
登録日2002-11-25
公開日2003-06-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J12
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BU of 1j12 by Molmil
Beta-Amylase from Bacillus cereus var. mycoides in Complex with alpha-EBG
分子名称: 2-[(2S)-oxiran-2-yl]ethyl alpha-D-glucopyranoside, Beta-amylase, CALCIUM ION
著者Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
登録日2002-11-25
公開日2003-06-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J0Z
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BU of 1j0z by Molmil
Beta-amylase from Bacillus cereus var. mycoides in complex with maltose
分子名称: Beta-amylase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
登録日2002-11-25
公開日2003-06-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J0Y
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BU of 1j0y by Molmil
Beta-amylase from Bacillus cereus var. mycoides in complex with glucose
分子名称: Beta-amylase, CALCIUM ION, beta-D-glucopyranose
著者Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
登録日2002-11-25
公開日2003-06-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
2M68
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BU of 2m68 by Molmil
NMR solution structure ensemble of 3-4D mutant domain 11 IGF2R in complex with IGF2 (domain 11 structure only)
分子名称: Insulin-like growth factor 2 receptor variant
著者Strickland, M, Williams, C, Richards, E, Minnall, L, Crump, M.P, Frago, S, Hughes, J, Garner, L, Hoppe, H, Rezgui, D, Zaccheo, O.J, Prince, S.N, Hassan, A.B, Whittaker, S.
登録日2013-03-27
公開日2014-10-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Functional evolution of IGF2:IGF2R domain 11 binding generates novel structural interactions and a specific IGF2 antagonist.
Proc.Natl.Acad.Sci.USA, 113, 2016
4BIN
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BU of 4bin by Molmil
Crystal structure of the E. coli N-acetylmuramoyl-L-alanine amidase AmiC
分子名称: N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMIC, SODIUM ION, ZINC ION
著者Kerff, F, Rocaboy, M, Herman, R, Sauvage, E, Charlier, P.
登録日2013-04-12
公開日2013-08-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The Crystal Structure of the Cell Division Amidase Amic Reveals the Fold of the Amin Domain, a New Peptidoglycan Binding Domain.
Mol.Microbiol., 90, 2013
2M6T
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BU of 2m6t by Molmil
NMR solution structure ensemble of 3-4D mutant domain 11 IGF2R
分子名称: Insulin-like growth factor 2 receptor variant
著者Strickland, M, Williams, C, Richards, E, Minnall, L, Crump, M.P, Frago, S, Hughes, J, Garner, L, Hoppe, H, Rezgui, D, Zaccheo, O.J, Prince, S.N, Hassan, A.B, Whittaker, S.
登録日2013-04-09
公開日2014-10-15
最終更新日2016-06-01
実験手法SOLUTION NMR
主引用文献Functional evolution of IGF2:IGF2R domain 11 binding generates novel structural interactions and a specific IGF2 antagonist.
Proc.Natl.Acad.Sci.USA, 113, 2016
4QRY
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BU of 4qry by Molmil
the ground state and the N intermediate of pharaonis halorhodopsin in complex with bromide ion
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, BROMIDE ION, Halorhodopsin, ...
著者Kouyama, T, Kawaguchi, H.
登録日2014-07-02
公開日2015-06-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of the L1, L2, N, and O States of pharaonis Halorhodopsin
Biophys.J., 108, 2015
6M5O
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BU of 6m5o by Molmil
Co-crystal structure of human serine hydroxymethyltransferase 2 in complex with Pyridoxal 5'-phosphate (PLP) and glycodeoxycholic acid
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, GLYCINE, Serine hydroxymethyltransferase, ...
著者Ota, T, Senoo, A, Ito, S, Ueno, G, Nagatoishi, S, Tsumoto, K, Sando, S.
登録日2020-03-11
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.30000663 Å)
主引用文献Structural basis for selective inhibition of human serine hydroxymethyltransferase by secondary bile acid conjugate.
Iscience, 24, 2021
3VHZ
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BU of 3vhz by Molmil
Crystal structure of the trans isomer of the L93A mutant of bacteriorhodopsin
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
著者Kouyama, T, Zhang, J.
登録日2011-09-13
公開日2012-06-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
3VI0
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BU of 3vi0 by Molmil
Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
著者Kouyama, T, Zhang, J.
登録日2011-09-13
公開日2012-06-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
8IM5
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BU of 8im5 by Molmil
Solution structure of the mouse HOIL1-L NZF domain in the free form
分子名称: RanBP-type and C3HC4-type zinc finger-containing protein 1, ZINC ION
著者Walinda, E, Morimoto, D.
登録日2023-03-06
公開日2023-08-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the HOIL-1L NZF domain reveals a conformational switch regulating linear ubiquitin affinity.
J.Biol.Chem., 299, 2023
6M5W
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BU of 6m5w by Molmil
Co-crystal structure of human serine hydroxymethyltransferase 1 in complex with Pyridoxal 5'-phosphate (PLP) and glycodeoxycholic acid
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, GLYCINE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Ota, T, Senoo, A, Ito, S, Ueno, G, Nagatoishi, S, Tsumoto, K, Sando, S.
登録日2020-03-11
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for selective inhibition of human serine hydroxymethyltransferase by secondary bile acid conjugate.
Iscience, 24, 2021
5M57
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BU of 5m57 by Molmil
Nek2 bound to arylaminopurine 6
分子名称: O6-CYCLOHEXYLMETHOXY-2-(4'-SULPHAMOYLANILINO) PURINE, Serine/threonine-protein kinase Nek2
著者Bayliss, R.
登録日2016-10-20
公開日2016-11-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-guided design of purine-based probes for selective Nek2 inhibition.
Oncotarget, 8, 2017
5M51
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BU of 5m51 by Molmil
Nek2 bound to arylaminopurine compound 8
分子名称: 3-[[6-(cyclohexylmethoxy)-9~{H}-purin-2-yl]amino]benzamide, Serine/threonine-protein kinase Nek2
著者Bayliss, R, Yeoh, S.
登録日2016-10-20
公開日2016-11-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structure-guided design of purine-based probes for selective Nek2 inhibition.
Oncotarget, 8, 2017
5M53
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BU of 5m53 by Molmil
Nek2 bound to arylaminopurine inhibitor 11
分子名称: 1,2-ETHANEDIOL, 3-[[6-(cyclohexylmethoxy)-7~{H}-purin-2-yl]amino]-~{N},~{N}-dimethyl-benzamide, DI(HYDROXYETHYL)ETHER, ...
著者Bayliss, R, Carr, K.H.
登録日2016-10-20
公開日2016-11-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-guided design of purine-based probes for selective Nek2 inhibition.
Oncotarget, 8, 2017
5M55
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BU of 5m55 by Molmil
Nek2 bound to arylaminopurine 71
分子名称: 6-[(~{Z})-2-(diethylamino)ethenyl]-~{N}-phenyl-7~{H}-purin-2-amine, CHLORIDE ION, SULFATE ION, ...
著者Bayliss, R.
登録日2016-10-20
公開日2016-11-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-guided design of purine-based probes for selective Nek2 inhibition.
Oncotarget, 8, 2017

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