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5WPL
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BU of 5wpl by Molmil
KRas G12V, bound to GppNHp and miniprotein 225-11
分子名称: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
著者Lee, S.-J, Shim, S.Y, McGee, J.H, Verdine, G.L.
登録日2017-08-05
公開日2018-01-03
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Exceptionally high-affinity Ras binders that remodel its effector domain.
J. Biol. Chem., 293, 2018
5WLB
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BU of 5wlb by Molmil
KRas G12V, bound to GppNHp and miniprotein 225-15a/b
分子名称: 225-15 a, 225-15 b, GTPase KRas, ...
著者Shim, S.Y, McGee, J.H, Lee, S.-J, Verdine, G.L.
登録日2017-07-26
公開日2018-01-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Exceptionally high-affinity Ras binders that remodel its effector domain.
J. Biol. Chem., 293, 2018
3QPH
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BU of 3qph by Molmil
The three-dimensional structure of TrmB, a global transcriptional regulator of the hyperthermophilic archaeon Pyrococcus furiosus in complex with sucrose
分子名称: ACETATE ION, GLYCEROL, TrmB, ...
著者Krug, M, Lee, S.-J, Boos, W, Welte, W, Diederichs, K.
登録日2011-02-13
公開日2012-05-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.992 Å)
主引用文献The three-dimensional structure of TrmB, a transcriptional regulator of dual function in the hyperthermophilic archaeon Pyrococcus furiosus in complex with sucrose.
Protein Sci., 22, 2013
6W13
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BU of 6w13 by Molmil
Human 8-oxoguanine glycosylase interrogating fully intrahelical oxoG lesion DNA
分子名称: 2-(2-ethoxyethoxy)ethanethiol, ACETATE ION, DNA (5'-D(P*AP*CP*CP*TP*GP*G)-3'), ...
著者Shigdel, U, Verdine, G.
登録日2020-03-03
公開日2020-09-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase.
Nat Commun, 11, 2020
6W0M
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BU of 6w0m by Molmil
Human 8-oxoguanine glycosylase crosslinked with oxoG lesion containing DNA
分子名称: 2-(2-ethoxyethoxy)ethanethiol, DNA (5'-D(P*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'), ...
著者Shigdel, U, Verdine, G.
登録日2020-03-02
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase.
Nat Commun, 11, 2020
6W0R
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BU of 6w0r by Molmil
Human 8-oxoguanine glycosylase interrogating fully intrahelical undamaged DNA
分子名称: 2-(2-ethoxyethoxy)ethanethiol, DNA (5'-D(P*CP*AP*GP*GP*TP*C)-3'), DNA (5'-D(P*CP*CP*TP*GP*G)-3'), ...
著者Shigdel, U, Verdine, G.
登録日2020-03-02
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase.
Nat Commun, 11, 2020
5YCL
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BU of 5ycl by Molmil
Crystal structure of HigBA complex from Shigella flexneri
分子名称: Antitoxin HigA, mRNA interferase HigB
著者Youn, W.S, Seok, S.H, Seo, M.D.
登録日2017-09-07
公開日2018-09-19
最終更新日2019-09-04
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural changes of antitoxin HigA from Shigella flexneri by binding of its cognate toxin HigB.
Int.J.Biol.Macromol., 130, 2019
6IRP
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BU of 6irp by Molmil
Crystal structure of HigA from Shigella flexneri
分子名称: Antitoxin HigA
著者Yoon, W.S, Seok, S.H, Seo, M.D.
登録日2018-11-14
公開日2019-09-04
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Structural changes of antitoxin HigA from Shigella flexneri by binding of its cognate toxin HigB.
Int.J.Biol.Macromol., 130, 2019
2DH6
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BU of 2dh6 by Molmil
Crystal structure of E. coli Apo-TrpB
分子名称: SULFATE ION, tryptophan synthase beta subunit
著者Nishio, K, Morimoto, Y, Ogasahara, K, Yasuoka, N, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-23
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Large conformational changes in the Escherichia coli tryptophan synthase beta(2) subunit upon pyridoxal 5'-phosphate binding
Febs J., 277, 2010
2DH5
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BU of 2dh5 by Molmil
Crystal structure of E. coli Holo-TrpB
分子名称: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, ...
著者Nishio, K, Morimoto, Y, Ogasahara, K, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-23
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Large conformational changes in the Escherichia coli tryptophan synthase beta(2) subunit upon pyridoxal 5'-phosphate binding
Febs J., 277, 2010
1NZN
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BU of 1nzn by Molmil
Cytosolic domain of the human mitchondrial fission protein Fis1 adopts a TPR fold
分子名称: Fission protein Fis1p, GLYCEROL, SULFATE ION
著者Gittis, A.G, Dohm, J.A, Hill, R.B.
登録日2003-02-18
公開日2004-03-02
最終更新日2011-11-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cytosolic domain of the human mitchondrial fission protein Fis1 adopts a TPR fold
Proteins, 54, 2004
7VT9
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BU of 7vt9 by Molmil
CRYSTAL STRUCTURE AT 3.4 ANGSTROMS RESOLUTION OF Maltodextrin glucosidase, MalZ, FROM Escherichia coli
分子名称: Maltodextrin glucosidase
著者Ahn, W.-C, Ahn, Y, Woo, E.-J.
登録日2021-10-28
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Dimeric architecture of maltodextrin glucosidase (MalZ) provides insights into the substrate recognition and hydrolysis mechanism.
Biochem.Biophys.Res.Commun., 586, 2022
7M78
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BU of 7m78 by Molmil
Room Temperature XFEL Crystallography reveals asymmetry in the vicinity of the two phylloquinones in Photosystem I
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Keable, S.M, Simon, P.S, Kolsch, A, Kern, J, Yachandra, V.K, Zouni, A, Yano, J.
登録日2021-03-26
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Room temperature XFEL crystallography reveals asymmetry in the vicinity of the two phylloquinones in photosystem I.
Sci Rep, 11, 2021
7M75
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BU of 7m75 by Molmil
Room Temperature XFEL Crystallography reveals asymmetry in the vicinity of the two phylloquinones in Photosystem I
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Keable, S.M, Simon, P.S, Kolsch, A, Kern, J, Yachandra, V.K, Zouni, A, Yano, J.
登録日2021-03-26
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Room temperature XFEL crystallography reveals asymmetry in the vicinity of the two phylloquinones in photosystem I.
Sci Rep, 11, 2021
7M76
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BU of 7m76 by Molmil
Room Temperature XFEL Crystallography reveals asymmetry in the vicinity of the two phylloquinones in Photosystem I
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Keable, S.M, Simon, P.S, Kolsch, A, Kern, J, Yachandra, V.K, Zouni, A, Yano, J.
登録日2021-03-26
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Room temperature XFEL crystallography reveals asymmetry in the vicinity of the two phylloquinones in photosystem I.
Sci Rep, 11, 2021
2RJ2
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BU of 2rj2 by Molmil
Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution
分子名称: CHLORIDE ION, F-box only protein 2, NICKEL (II) ION
著者Vaijayanthimala, S, Velmurugan, D, Mizushima, T, Yamane, T, Yoshida, Y, Tanaka, K.
登録日2007-10-14
公開日2008-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution
To be Published
6M93
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BU of 6m93 by Molmil
Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-1933 ternary complex
分子名称: 2-oxo-N-[3-(1H-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)-1,2-dihydropyridine-3-carboxamide, Catenin beta-1, F-box/WD repeat-containing protein 1A, ...
著者Simonetta, K.R, Clifton, M.C, Walter, R.L, Ranieri, G.M, Lee, S.J.
登録日2018-08-22
公開日2019-04-03
最終更新日2019-04-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Prospective discovery of small molecule enhancers of an E3 ligase-substrate interaction.
Nat Commun, 10, 2019
6M92
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BU of 6m92 by Molmil
Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-2663 ternary complex
分子名称: 3-{[2-oxo-4-phenoxy-6-(trifluoromethyl)-1,2-dihydropyridine-3-carbonyl]amino}benzoic acid, Catenin beta-1, F-box/WD repeat-containing protein 1A, ...
著者Simonetta, K.R, Clifton, M.C, Walter, R.L, Ranieri, G.M, Carter, J.J, Lee, S.J.
登録日2018-08-22
公開日2019-04-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Prospective discovery of small molecule enhancers of an E3 ligase-substrate interaction.
Nat Commun, 10, 2019
2DZU
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BU of 2dzu by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D110N) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZS
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BU of 2dzs by Molmil
Structure of mutant tryptophan synthase alpha-subunit (E103A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZW
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BU of 2dzw by Molmil
Structure of mutant tryptophan synthase alpha-subunit (E244A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2E09
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BU of 2e09 by Molmil
Structure of mutant tryptophan synthase alpha-subunit (E74A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-10-02
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZP
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BU of 2dzp by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D17N) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZX
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BU of 2dzx by Molmil
Structure of mutant tryptophan synthase alpha-subunit (E131-132A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZV
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BU of 2dzv by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D146A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published

221051

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