Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2HQ6
DownloadVisualize
BU of 2hq6 by Molmil
Structure of the Cyclophilin_CeCYP16-Like Domain of the Serologically Defined Colon Cancer Antigen 10 from Homo Sapiens
分子名称: GLYCEROL, IODIDE ION, Serologically defined colon cancer antigen 10
著者Walker, J.R, Davis, T, Paramanathan, R, Newman, E.M, Finerty Jr, P.J, Mackenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2006-07-18
公開日2006-08-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and biochemical characterization of the human cyclophilin family of peptidyl-prolyl isomerases.
PLoS Biol., 8, 2010
1VLR
DownloadVisualize
BU of 1vlr by Molmil
Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution
分子名称: 1,2-ETHANEDIOL, mRNA decapping enzyme
著者Joint Center for Structural Genomics (JCSG)
登録日2004-08-10
公開日2004-08-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structure of an Apo mRNA decapping enzyme (DcpS) from Mouse at 1.83 A resolution.
Proteins, 60, 2005
1VKM
DownloadVisualize
BU of 1vkm by Molmil
Crystal structure of an indigoidine synthase a (idga)-like protein (tm1464) from thermotoga maritima msb8 at 1.90 A resolution
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, UNKNOWN LIGAND, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2004-06-09
公開日2004-06-29
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an indigoidine synthase A (IndA)-like protein (TM1464) from Thermotoga maritima at 1.90 A resolution reveals a new fold.
Proteins, 59, 2005
1VQR
DownloadVisualize
BU of 1vqr by Molmil
Crystal structure of a virulence factor (cj0248) from campylobacter jejuni subsp. jejuni at 2.25 A resolution
分子名称: hypothetical protein Cj0248
著者Joint Center for Structural Genomics (JCSG)
登録日2004-12-17
公開日2004-12-28
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of virulence factor CJ0248 from Campylobacter jejuni at 2.25 A resolution reveals a new fold.
Proteins, 62, 2006
1VPZ
DownloadVisualize
BU of 1vpz by Molmil
Crystal structure of a putative carbon storage regulator protein (csra, pa0905) from pseudomonas aeruginosa at 2.05 A resolution
分子名称: Carbon storage regulator homolog
著者Joint Center for Structural Genomics (JCSG)
登録日2004-11-24
公開日2004-12-14
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of the global regulatory protein CsrA from Pseudomonas putida at 2.05 A resolution reveals a new fold.
Proteins, 61, 2005
1VKH
DownloadVisualize
BU of 1vkh by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE SERINE HYDROLASE (YDR428C) FROM SACCHAROMYCES CEREVISIAE AT 1.85 A RESOLUTION
分子名称: CHLORIDE ION, GLYCEROL, putative serine hydrolase
著者Joint Center for Structural Genomics (JCSG)
登録日2004-05-20
公開日2004-06-08
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of an alpha/beta serine hydrolase (YDR428C) from Saccharomyces cerevisiae at 1.85 A resolution
Proteins, 58, 2005
4D9S
DownloadVisualize
BU of 4d9s by Molmil
Crystal structure of Arabidopsis thaliana UVR8 (UV Resistance locus 8)
分子名称: UVB-resistance protein UVR8
著者Arvai, A.S, Christie, J.M, Pratt, A.J, Hitomi, K, Getzoff, E.D.
登録日2012-01-11
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Plant UVR8 Photoreceptor Senses UV-B by Tryptophan-Mediated Disruption of Cross-Dimer Salt Bridges.
Science, 335, 2012
3IPR
DownloadVisualize
BU of 3ipr by Molmil
Crystal structure of the Enterococcus faecalis gluconate specific EIIA phosphotransferase system component
分子名称: CALCIUM ION, PTS system, IIA component
著者Reinelt, S, Welti, S, Scheffzek, K.
登録日2009-08-18
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the Enterococcus faecalis EIIA(gnt) PTS component.
Biochem.Biophys.Res.Commun., 388, 2009
1ZX8
DownloadVisualize
BU of 1zx8 by Molmil
CRYSTAL STRUCTURE OF an atypical cyclophilin (peptidylprolyl cis-trans isomerase) (TM1367) FROM THERMOTOGA MARITIMA AT 1.90 A RESOLUTION
分子名称: NICKEL (II) ION, PENTAETHYLENE GLYCOL, hypothetical protein TM1367
著者Joint Center for Structural Genomics (JCSG)
登録日2005-06-07
公開日2005-07-26
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of TM1367 from Thermotoga maritima at 1.90 A resolution reveals an atypical member of the cyclophilin (peptidylprolyl isomerase) fold.
Proteins, 63, 2006
1Z9F
DownloadVisualize
BU of 1z9f by Molmil
Crystal structure of single stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution
分子名称: Single-strand binding protein
著者Joint Center for Structural Genomics (JCSG)
登録日2005-04-01
公開日2005-04-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution.
Proteins, 63, 2006
3GVA
DownloadVisualize
BU of 3gva by Molmil
Crystal Structure Analysis of S. Pombe ATL
分子名称: Alkyltransferase-like protein 1
著者Tubbs, J.L, Arvai, A.S, Tainer, J.A.
登録日2009-03-30
公開日2009-06-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Flipping of alkylated DNA damage bridges base and nucleotide excision repair.
Nature, 459, 2009
3GX4
DownloadVisualize
BU of 3gx4 by Molmil
Crystal Structure Analysis of S. Pombe ATL in complex with DNA
分子名称: Alkyltransferase-like protein 1, COBALT HEXAMMINE(III), DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3'), ...
著者Tubbs, J.L, Arvai, A.S, Tainer, J.A.
登録日2009-04-01
公開日2009-06-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Flipping of alkylated DNA damage bridges base and nucleotide excision repair.
Nature, 459, 2009
6W8W
DownloadVisualize
BU of 6w8w by Molmil
Crystal structure of mouse DNMT1 in complex with CCG DNA
分子名称: CCG DNA (5'-D(*AP*CP*TP*TP*AP*(5CM)P*GP*GP*AP*AP*GP*G)-3'), CCG DNA (5'-D(*CP*CP*TP*TP*CP*(C49)P*GP*TP*AP*AP*GP*T)-3'), DNA (cytosine-5)-methyltransferase 1, ...
著者Anteneh, H, Song, J.
登録日2020-03-21
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献DNMT1 activity, base flipping mechanism and genome-wide DNA methylation are regulated by the DNA sequence context
Nat Commun, 2020
6W8V
DownloadVisualize
BU of 6w8v by Molmil
Crystal structure of mouse DNMT1 in complex with ACG DNA
分子名称: ACG DNA (5'-D(*AP*CP*TP*TP*AP*(C49)P*GP*GP*AP*AP*GP*G)-3'), ACG DNA (5'-D(*CP*CP*TP*TP*CP*(5CM)P*GP*TP*AP*AP*GP*T)-3'), DNA (cytosine-5)-methyltransferase 1, ...
著者Anteneh, H, Song, J.
登録日2020-03-21
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献DNMT1 activity, base flipping mechanism and genome-wide DNA methylation are regulated by the DNA sequence context
Nat Commun, 2020
4HDU
DownloadVisualize
BU of 4hdu by Molmil
Crystal structure of S. pombe ATL1 in complex with damaged DNA containing 2-aminopurine
分子名称: 5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3', 5'-D(*GP*CP*CP*AP*TP*GP*(2PR)P*CP*TP*AP*GP*TP*A)-3', Alkyltransferase-like protein 1
著者Tubbs, J.L, Tainer, J.A.
登録日2012-10-02
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.848 Å)
主引用文献Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-{pi} interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
6EL3
DownloadVisualize
BU of 6el3 by Molmil
Structure of Progesterone 5beta-Reductase from Arabidopsis thaliana in complex with NADP
分子名称: 3-oxo-Delta(4,5)-steroid 5-beta-reductase, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Muller, Y.A, Schmidt, K, Egerer-Sieber, C.
登録日2017-09-27
公開日2018-09-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献PRISEs (progesterone 5 beta-reductase and/or iridoid synthase-like 1,4-enone reductases): Catalytic and substrate promiscuity allows for realization of multiple pathways in plant metabolism.
Phytochemistry, 156, 2018
4HDV
DownloadVisualize
BU of 4hdv by Molmil
Crystal structure of S. pombe ATL1 in complex with damaged DNA containing 2,6-diaminopurine
分子名称: 5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3', 5'-D(*GP*CP*CP*AP*TP*GP*(1AP)P*CP*TP*AP*GP*TP*A)-3', Alkyltransferase-like protein 1
著者Tubbs, J.L, Tainer, J.A.
登録日2012-10-02
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-{pi} interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
2I8C
DownloadVisualize
BU of 2i8c by Molmil
Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, MAGNESIUM ION, ...
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-09-01
公開日2006-09-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I87
DownloadVisualize
BU of 2i87 by Molmil
Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: D-alanine-D-alanine ligase, SULFATE ION
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-09-01
公開日2006-10-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
4L1F
DownloadVisualize
BU of 4l1f by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
分子名称: 1,3-PROPANDIOL, Acyl-CoA dehydrogenase domain protein, COENZYME A PERSULFIDE, ...
著者Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
登録日2013-06-03
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
4L2I
DownloadVisualize
BU of 4l2i by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
分子名称: CHLORIDE ION, Electron transfer flavoprotein alpha subunit, Electron transfer flavoprotein alpha/beta-subunit, ...
著者Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
登録日2013-06-04
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
4KPU
DownloadVisualize
BU of 4kpu by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
分子名称: CHLORIDE ION, Electron transfer flavoprotein alpha subunit, Electron transfer flavoprotein alpha/beta-subunit, ...
著者Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
登録日2013-05-14
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
4ENJ
DownloadVisualize
BU of 4enj by Molmil
Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-hydroxyethylguanine
分子名称: Alkyltransferase-like protein 1, DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3'), DNA (5'-D(*GP*CP*CP*AP*TP*GP*(EHG)P*CP*TP*AP*GP*TP*A)-3')
著者Tubbs, J.L, Arvai, A.S, Tainer, J.A.
登録日2012-04-13
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.0989 Å)
主引用文献Atl1 Regulates Choice between Global Genome and Transcription-Coupled Repair of O(6)-Alkylguanines.
Mol.Cell, 47, 2012
4ENM
DownloadVisualize
BU of 4enm by Molmil
Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-benzylguanine
分子名称: Alkyltransferase-like protein 1, DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3'), DNA (5'-D(*GP*CP*CP*AP*TP*GP*(BZG)P*CP*TP*AP*GP*TP*A)-3')
著者Tubbs, J.L, Arvai, A.S, Tainer, J.A.
登録日2012-04-13
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8402 Å)
主引用文献Atl1 Regulates Choice between Global Genome and Transcription-Coupled Repair of O(6)-Alkylguanines.
Mol.Cell, 47, 2012
4ENK
DownloadVisualize
BU of 4enk by Molmil
Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-propylguanine
分子名称: Alkyltransferase-like protein 1, DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3'), DNA (5'-D(*GP*CP*CP*AP*TP*GP*(6PO)P*CP*TP*AP*GP*TP*A)-3')
著者Tubbs, J.L, Arvai, A.S, Tainer, J.A.
登録日2012-04-13
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.0445 Å)
主引用文献Atl1 Regulates Choice between Global Genome and Transcription-Coupled Repair of O(6)-Alkylguanines.
Mol.Cell, 47, 2012

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon