Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5FFA
DownloadVisualize
BU of 5ffa by Molmil
CopM (with an N-terminal His-tag) in the apo form
分子名称: CopM
著者Zhao, S, Wang, X, Liu, L.
登録日2015-12-18
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Structural basis for copper/silver binding by the Synechocystis metallochaperone CopM.
Acta Crystallogr D Struct Biol, 72, 2016
8HKC
DownloadVisualize
BU of 8hkc by Molmil
Cryo-EM structure of E. coli RNAP sigma32 complex
分子名称: DNA (54-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Wu, S, Ma, L.X.
登録日2022-11-25
公開日2023-05-31
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献Structural Insight into the Mechanism of sigma 32-Mediated Transcription Initiation of Bacterial RNA Polymerase.
Biomolecules, 13, 2023
5FFC
DownloadVisualize
BU of 5ffc by Molmil
CopM in the Cu(II)-bound form
分子名称: COPPER (II) ION, CopM, SULFATE ION
著者Zhao, S, Wang, X, Liu, L.
登録日2015-12-18
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Structural basis for copper/silver binding by the Synechocystis metallochaperone CopM.
Acta Crystallogr D Struct Biol, 72, 2016
6OHT
DownloadVisualize
BU of 6oht by Molmil
Structure of EBP and U18666A
分子名称: 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase, 3beta-(2-Diethylaminoethoxy)androst-5-en-17-one
著者Long, T, Li, X.
登録日2019-04-06
公開日2019-06-19
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for human sterol isomerase in cholesterol biosynthesis and multidrug recognition.
Nat Commun, 10, 2019
1YYB
DownloadVisualize
BU of 1yyb by Molmil
Solution structure of 1-26 fragment of human programmed cell death 5 protein
分子名称: Programmed cell death protein 5
著者Liu, D.S, Feng, Y.G, Yao, H.W, Wang, J.F.
登録日2005-02-24
公開日2005-09-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The N-terminal 26-residue fragment of human programmed cell death 5 protein can form a stable alpha-helix having unique electrostatic potential character.
Biochem.J., 392, 2005
6OEV
DownloadVisualize
BU of 6oev by Molmil
Structure of human Patched1 in complex with native Sonic Hedgehog
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein patched homolog 1, ...
著者Qi, X, Li, X.
登録日2019-03-27
公開日2019-04-17
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structures of human Patched and its complex with native palmitoylated sonic hedgehog.
Nature, 560, 2018
5FFD
DownloadVisualize
BU of 5ffd by Molmil
CopM in the Ag-bound form (by co-crystallization)
分子名称: CopM, SILVER ION
著者Zhao, S, Wang, X, Liu, L.
登録日2015-12-18
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献Structural basis for copper/silver binding by the Synechocystis metallochaperone CopM.
Acta Crystallogr D Struct Biol, 72, 2016
3K2L
DownloadVisualize
BU of 3k2l by Molmil
Crystal Structure of dual-specificity tyrosine phosphorylation regulated kinase 2 (DYRK2)
分子名称: CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 2, SODIUM ION, ...
著者Filippakopoulos, P, Myrianthopoulos, V, Soundararajan, M, Krojer, T, Hapka, E, Fedorov, O, Berridge, G, Wang, J, Shrestha, L, Pike, A.C.W, Ugochukwu, E, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Mikros, E, Knapp, S, Structural Genomics Consortium (SGC)
登録日2009-09-30
公開日2009-10-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structures of Down Syndrome Kinases, DYRKs, Reveal Mechanisms of Kinase Activation and Substrate Recognition.
Structure, 21, 2013
4GR7
DownloadVisualize
BU of 4gr7 by Molmil
The human W42R Gamma D-Crystallin Mutant Structure at 1.7A Resolution
分子名称: Gamma-crystallin D, PHOSPHATE ION
著者Ji, F, Jung, J, Koharudin, L.M.I, Gronenborn, A.M.
登録日2012-08-24
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The human W42R gamma D-crystallin mutant structure provides a link between congenital and age-related cataracts.
J.Biol.Chem., 288, 2013
7EO0
DownloadVisualize
BU of 7eo0 by Molmil
FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY C4
分子名称: Ig heavy chain variable region, Ig lamda chain variable region, O/TIBET/99 VP1, ...
著者He, Y, Li, K.
登録日2021-04-21
公開日2021-08-18
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Two Cross-Protective Antigen Sites on Foot-and-Mouth Disease Virus Serotype O Structurally Revealed by Broadly Neutralizing Antibodies from Cattle.
J.Virol., 95, 2021
6OT6
DownloadVisualize
BU of 6ot6 by Molmil
Rat ERK2 D319N
分子名称: Mitogen-activated protein kinase 1, SULFATE ION
著者Taylor, C.A, Goldsmith, E.J, Cobb, M.H.
登録日2019-05-02
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Functional divergence caused by mutations in an energetic hotspot in ERK2.
Proc.Natl.Acad.Sci.USA, 116, 2019
7D99
DownloadVisualize
BU of 7d99 by Molmil
human potassium-chloride co-transporter KCC4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, POTASSIUM ION, ...
著者Xie, Y, Chang, S, Zhao, C, Ye, S, Guo, J.
登録日2020-10-12
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures and an activation mechanism of human potassium-chloride cotransporters.
Sci Adv, 6, 2020
6OTS
DownloadVisualize
BU of 6ots by Molmil
Rat ERK2 E320K
分子名称: Mitogen-activated protein kinase 1
著者Taylor, C.A, Cormier, K.W, Juang, Y.-C, Goldsmith, E.J, Cobb, M.H.
登録日2019-05-03
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functional divergence caused by mutations in an energetic hotspot in ERK2.
Proc.Natl.Acad.Sci.USA, 116, 2019
5T5G
DownloadVisualize
BU of 5t5g by Molmil
human SETD8 in complex with MS2177
分子名称: 7-(2-aminoethoxy)-6-methoxy-2-(pyrrolidin-1-yl)-N-[5-(pyrrolidin-1-yl)pentyl]quinazolin-4-amine, N-lysine methyltransferase KMT5A, UNKNOWN ATOM OR ION
著者Yu, W, Tempel, W, Babault, N, Ma, A, Butler, K.V, Jin, J, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2016-08-30
公開日2016-09-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Based Design of a Covalent Inhibitor of the SET Domain-Containing Protein 8 (SETD8) Lysine Methyltransferase.
J. Med. Chem., 59, 2016
5TH7
DownloadVisualize
BU of 5th7 by Molmil
Complex of SETD8 with MS453
分子名称: 1,2-ETHANEDIOL, N-(3-{[6,7-dimethoxy-2-(pyrrolidin-1-yl)quinazolin-4-yl]amino}propyl)propanamide, N-lysine methyltransferase KMT5A, ...
著者Yu, W, Tempel, W, Babault, N, Ma, A, Butler, K.V, Jin, J, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2016-09-29
公開日2016-11-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-Based Design of a Covalent Inhibitor of the SET Domain-Containing Protein 8 (SETD8) Lysine Methyltransferase.
J. Med. Chem., 59, 2016
7V3Z
DownloadVisualize
BU of 7v3z by Molmil
Structure of cannabinoid receptor type 1(CB1)
分子名称: 2-[(1R,2R,5R)-5-hydroxy-2-(3-hydroxypropyl)cyclohexyl]-5-(2-methyloctan-2-yl)phenol, CHOLESTEROL, FLAVIN MONONUCLEOTIDE, ...
著者Liu, Z.J, Shen, L, Hua, T, Yao, D.Q, Wu, L.J.
登録日2021-08-12
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献A Genetically Encoded F-19 NMR Probe Reveals the Allosteric Modulation Mechanism of Cannabinoid Receptor 1.
J.Am.Chem.Soc., 143, 2021
5FFB
DownloadVisualize
BU of 5ffb by Molmil
CopM in the apo form
分子名称: CopM
著者Zhao, S, Wang, X, Liu, L.
登録日2015-12-18
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献Structural basis for copper/silver binding by the Synechocystis metallochaperone CopM.
Acta Crystallogr D Struct Biol, 72, 2016
4YR8
DownloadVisualize
BU of 4yr8 by Molmil
Crystal structure of JNK in complex with a regulator protein
分子名称: CHLORIDE ION, Dual specificity protein phosphatase 16, Mitogen-activated protein kinase 8
著者Liu, X, Wang, J, Wu, J.W, Wang, Z.X.
登録日2015-03-14
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A conserved motif in JNK/p38-specific MAPK phosphatases as a determinant for JNK1 recognition and inactivation.
Nat Commun, 7, 2016
7D90
DownloadVisualize
BU of 7d90 by Molmil
human potassium-chloride co-transporter KCC3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, potassium-chloride cotransporter 3
著者Xie, Y, Chang, S, Zhao, C, Ye, S, Guo, J.
登録日2020-10-12
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures and an activation mechanism of human potassium-chloride cotransporters.
Sci Adv, 6, 2020
7D8Z
DownloadVisualize
BU of 7d8z by Molmil
human potassium-chloride co-transporter KCC2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, potassium-chloride cotransporter 2
著者Xie, Y, Chang, S, Zhao, C, Ye, S, Guo, J.
登録日2020-10-11
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures and an activation mechanism of human potassium-chloride cotransporters.
Sci Adv, 6, 2020
5TZY
DownloadVisualize
BU of 5tzy by Molmil
GPR40 in complex with AgoPAM AP8 and partial agonist MK-8666
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S,3R)-3-cyclopropyl-3-[(2R)-2-(1-{(1S)-1-[5-fluoro-2-(trifluoromethoxy)phenyl]ethyl}piperidin-4-yl)-3,4-dihydro-2H-1-benzopyran-7-yl]-2-methylpropanoic acid, (5aR,6S,6aS)-3-({2',6'-dimethyl-4'-[3-(methylsulfonyl)propoxy][1,1'-biphenyl]-3-yl}methoxy)-5,5a,6,6a-tetrahydrocyclopropa[4,5]cyclopenta[1,2-c]pyridine-6-carboxylic acid, ...
著者Lu, J, Byrne, N, Patel, S, Sharma, S, Soisson, S.M.
登録日2016-11-22
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structural basis for the cooperative allosteric activation of the free fatty acid receptor GPR40.
Nat. Struct. Mol. Biol., 24, 2017
7VZR
DownloadVisualize
BU of 7vzr by Molmil
Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the smaller form)
分子名称: BACTERIOCHLOROPHYLL A, CALCIUM ION, CHLOROPHYLL A, ...
著者Huang, G.Q, Dong, S.S, Qin, X.C, Sui, S.F.
登録日2021-11-16
公開日2022-12-28
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.22 Å)
主引用文献Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c
Nat Commun, 13, 2022
7VS3
DownloadVisualize
BU of 7vs3 by Molmil
The crystal structure of rat calcium-dependent activator protein for secretion (CAPS) C2PH
分子名称: Calcium-dependent secretion activator 1, SULFATE ION
著者Zhou, H, Wei, Z.Q, Zhang, L, Ren, Y.J, Ma, C.
登録日2021-10-25
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献The C 2 and PH domains of CAPS constitute an effective PI(4,5)P2-binding unit essential for Ca 2+ -regulated exocytosis.
Structure, 31, 2023
7VZG
DownloadVisualize
BU of 7vzg by Molmil
Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the larger form)
分子名称: BACTERIOCHLOROPHYLL A, CALCIUM ION, CHLOROPHYLL A, ...
著者Huang, G.Q, Dong, S.S, Qin, X.C, Sui, S.F.
登録日2021-11-16
公開日2023-02-22
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c.
Nat Commun, 13, 2022
3T7K
DownloadVisualize
BU of 3t7k by Molmil
Complex structure of Rtt107p and phosphorylated histone H2A
分子名称: Histone H2A.1, Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.028 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon