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3NVM
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BU of 3nvm by Molmil
Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle
分子名称: Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase, NOP5/NOP56 related protein
著者Xue, S, Wang, R, Li, H.
登録日2010-07-08
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.408 Å)
主引用文献Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle.
Mol.Cell, 39, 2010
3NVI
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BU of 3nvi by Molmil
Structure of N-terminal truncated Nop56/58 bound with L7Ae and box C/D RNA
分子名称: 50S ribosomal protein L7Ae, NOP5/NOP56 related protein, RNA (5'-R(*CP*UP*CP*UP*GP*AP*CP*CP*GP*AP*AP*AP*GP*GP*CP*GP*UP*GP*AP*UP*GP*AP*GP*C)-3')
著者Li, H, Xue, S, Wang, R.
登録日2010-07-08
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.709 Å)
主引用文献Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle.
Mol.Cell, 39, 2010
4D8N
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BU of 4d8n by Molmil
Human Kallikrein 6 Inhibitors with a para-Amidobenzylanmine P1 Group Carry a High Binding Efficiency
分子名称: 2-{[4-(aminomethyl)phenyl]carbamoyl}-1-[(1-benzyl-1H-imidazol-2-yl)methyl]-3-hydroxypyridinium, Kallikrein-6
著者Chen, X, Xia, T, Wang, R.
登録日2012-01-11
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Human kallikrein 6 inhibitors with a para-amidobenzylanmine P1 group identified through virtual screening.
Bioorg.Med.Chem.Lett., 22, 2012
3Q48
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BU of 3q48 by Molmil
Crystal structure of Pseudomonas aeruginosa CupB2 chaperone
分子名称: Chaperone CupB2
著者Cai, X, Wang, R, Filloux, A, Waksman, G, Meng, G.
登録日2010-12-23
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional characterization of Pseudomonas aeruginosa CupB chaperones
Plos One, 6, 2011
3I4H
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BU of 3i4h by Molmil
Crystal structure of Cas6 in Pyrococcus furiosus
分子名称: endoribonuclease
著者Carte, J, Wang, R, Li, H, Terns, R.M, Terns, M.P.
登録日2009-07-01
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes
Genes Dev., 22, 2008
1BBY
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BU of 1bby by Molmil
DNA-BINDING DOMAIN FROM HUMAN RAP30, NMR, MINIMIZED AVERAGE
分子名称: RAP30
著者Groft, C.M, Uljon, S.N, Wang, R, Werner, M.H.
登録日1998-04-26
公開日1998-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural homology between the Rap30 DNA-binding domain and linker histone H5: implications for preinitiation complex assembly.
Proc.Natl.Acad.Sci.USA, 95, 1998
7C6Q
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BU of 7c6q by Molmil
Novel natural PPARalpha agonist with a unique binding mode
分子名称: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN, Peroxisome proliferator-activated receptor alpha
著者Tian, S.Y, Wang, R, Zheng, W.L, Li, Y.
登録日2020-05-22
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structural Basis for PPARs Activation by The Dual PPAR alpha / gamma Agonist Sanguinarine: A Unique Mode of Ligand Recognition.
Molecules, 26, 2021
3UYR
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BU of 3uyr by Molmil
Structure of a monoclonal antibody complexed with its MHC-I antigen
分子名称: 1,2-ETHANEDIOL, H-2 class I histocompatibility antigen, L-D alpha chain, ...
著者Margulies, D.H, Mage, M.G, Wang, R, Natarajan, K.
登録日2011-12-06
公開日2012-07-25
最終更新日2012-08-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Peptide-receptive transition state of MHC class I molecules: insight from structure and molecular dynamics.
J.Immunol., 189, 2012
3UO1
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BU of 3uo1 by Molmil
Structure of a monoclonal antibody complexed with its MHC-I antigen
分子名称: ANTI-MHC-I MONOCLONAL ANTIBODY, 64-3-7 H CHAIN, 64-3-7 L CHAIN, ...
著者Margulies, D.H, Mage, M.G, Wang, R, Natarajan, K.
登録日2011-11-16
公開日2012-07-25
最終更新日2012-08-01
実験手法X-RAY DIFFRACTION (1.641 Å)
主引用文献The Peptide-receptive transition state of MHC class I molecules: insight from structure and molecular dynamics.
J.Immunol., 189, 2012
3V52
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BU of 3v52 by Molmil
Structure of a monoclonal antibody complexed with its MHC-I antigen
分子名称: 1,2-ETHANEDIOL, ANTI-MHC-I MONOCLONAL ANTIBODY, 64-3-7 H CHAIN, ...
著者Mage, M.G, Dolan, M.A, Wang, R, Boyd, L.F, Revilleza, M.J, Robinson, H, Natarajan, K, Myers, N.B, Hansen, T.H, Margulies, D.H.
登録日2011-12-15
公開日2012-07-25
最終更新日2012-08-01
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献The Peptide-receptive transition state of MHC class I molecules: insight from structure and molecular dynamics.
J.Immunol., 189, 2012
3V4U
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BU of 3v4u by Molmil
Structure of a monoclonal antibody complexed with its MHC-I antigen
分子名称: ANTI-MHC-I MONOCLONAL ANTIBODY, 64-3-7 H CHAIN, 64-3-7 L CHAIN, ...
著者Margulies, D.H, Mage, M.G, Wang, R, Natarajan, K.
登録日2011-12-15
公開日2012-07-25
最終更新日2012-08-01
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献The Peptide-receptive transition state of MHC class I molecules: insight from structure and molecular dynamics.
J.Immunol., 189, 2012
5TRR
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BU of 5trr by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2169
分子名称: N,N-diethyl-N~2~-(3-phenylpropanoyl)-L-asparaginyl-N-[(naphthalen-1-yl)methyl]-L-alaninamide, Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
登録日2016-10-27
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.103 Å)
主引用文献Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TRY
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BU of 5try by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2206
分子名称: (2~{S})-~{N}-[(2~{S})-3-methoxy-1-(naphthalen-1-ylmethylamino)-1-oxidanylidene-propan-2-yl]-4-oxidanylidene-2-(3-phenylpropanoylamino)-4-piperidin-1-yl-butanamide, Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
登録日2016-10-27
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.000008 Å)
主引用文献Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TS0
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BU of 5ts0 by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2208
分子名称: (2S)-N-{(2S)-3-methoxy-1-[(naphthalen-1-ylmethyl)amino]-1-oxopropan-2-yl}-4-oxo-2-[(3-phenylpropanoyl)amino]-4-(1H-pyrrol-1-yl)butanamide (non-preferred name), Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
登録日2016-10-27
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.84679747 Å)
主引用文献Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TRS
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BU of 5trs by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2144
分子名称: N-tert-butoxy-N~2~-(5-methyl-1,2-oxazole-3-carbonyl)-L-asparaginyl-O-methyl-N-[(naphthalen-1-yl)methyl]-L-serinamide, Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
登録日2016-10-27
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.083567 Å)
主引用文献Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TRG
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BU of 5trg by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide DPLG-2
分子名称: N,N-diethyl-N~2~-[(2E)-3-phenylprop-2-enoyl]-L-asparaginyl-4-fluoro-N-[(naphthalen-1-yl)methyl]-L-phenylalaninamide, Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.-C, Fan, H, Singh, R.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
登録日2016-10-26
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
8XBS
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BU of 8xbs by Molmil
C. elegans apo-SID1 structure
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gong, D.S.
登録日2023-12-07
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Structural basis for double-stranded RNA recognition by SID1.
Nucleic Acids Res., 2024
8XC1
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BU of 8xc1 by Molmil
C. elegans SID1 in complex with dsRNA
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gong, D.S.
登録日2023-12-07
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Structural basis for double-stranded RNA recognition by SID1.
Nucleic Acids Res., 2024
7E8M
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BU of 7e8m by Molmil
Crystal structure of SARS-CoV-2 antibody P2C-1F11 with mutated RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody P2C-1F11 heavy chain, ...
著者Wang, X.Q, Zhang, L.Q, Ge, J.W, Wang, R.K, Lan, J.
登録日2021-03-02
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Analysis of SARS-CoV-2 variant mutations reveals neutralization escape mechanisms and the ability to use ACE2 receptors from additional species.
Immunity, 54, 2021
6VAA
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BU of 6vaa by Molmil
Structure of the Fanconi Anemia ID complex bound to ICL DNA
分子名称: DNA (26-MER), DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
著者Pavletich, N.P.
登録日2019-12-17
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex.
Nature, 580, 2020
6VAF
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BU of 6vaf by Molmil
Structure of mono-ubiquitinated FANCD2 bound to non-ubiquitinated FANCI and to DNA
分子名称: DNA (29-MER), Fanconi anemia group D2 protein, Fanconi anemia, ...
著者Pavletich, N.P.
登録日2019-12-17
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex.
Nature, 580, 2020
6VAE
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BU of 6vae by Molmil
Mono-ubiquitinated Fanconi Anemia ID complex bound to ICL DNA
分子名称: DNA (29-MER), Fanconi anemia group D2 protein, Fanconi anemia, ...
著者Pavletich, N.P.
登録日2019-12-17
公開日2020-03-18
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex.
Nature, 580, 2020
6VAD
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BU of 6vad by Molmil
Fanconi Anemia ID complex
分子名称: Fanconi anemia group D2 protein, Fanconi anemia, complementation group I
著者Pavletich, N.P.
登録日2019-12-17
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex.
Nature, 580, 2020
5GT1
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BU of 5gt1 by Molmil
crystal structure of cbpa from L. salivarius REN
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Choline binding protein A, ...
著者Jiang, L, Ren, F.
登録日2016-08-18
公開日2017-07-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Adhesion of Lactobacillus salivarius REN to a Human Intestinal Epithelial Cell Line Requires S-layer Proteins
Sci Rep, 7, 2017
5HNQ
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BU of 5hnq by Molmil
Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex
分子名称: 5fC modified RNA
著者Luo, Z, Sheng, J.
登録日2016-01-18
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Base pairing and structural insights into the 5-formylcytosine in RNA duplex.
Nucleic Acids Res., 44, 2016

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