Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6TL8
DownloadVisualize
BU of 6tl8 by Molmil
Structural basis of SALM3 dimerization and adhesion complex formation with the presynaptic receptor protein tyrosine phosphatases
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Myeloid cell surface antigen CD33,Leucine-rich repeat and fibronectin type-III domain-containing protein 4
著者Karki, S, Shkumatov, A.V, Bae, S, Ko, J, Kajander, T.
登録日2019-12-02
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of SALM3 dimerization and synaptic adhesion complex formation with PTP sigma.
Sci Rep, 10, 2020
5YSS
DownloadVisualize
BU of 5yss by Molmil
Crystal structure of aminocaproic acid cyclase in complex with NAD (+)
分子名称: 3-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Fu, Y, Yeom, S.J, Lee, S.G.
登録日2017-11-15
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.276 Å)
主引用文献A synthetic microbial biosensor for high-throughput screening of lactam biocatalysts
Nat Commun, 9, 2018
5ZXB
DownloadVisualize
BU of 5zxb by Molmil
Crystal structure of ACK1 with compound 10d
分子名称: Activated CDC42 kinase 1, N-{3-[7-{[6-(4-acetylpiperazin-1-yl)pyridin-3-yl]amino}-1-methyl-2-oxo-1,4-dihydropyrimido[4,5-d]pyrimidin-3(2H)-yl]-4-methylphenyl}-3-(trifluoromethyl)benzamide
著者Hong, E.M, Kim, H.L, Sim, T.B.
登録日2018-05-18
公開日2018-09-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献First SAR Study for Overriding NRAS Mutant Driven Acute Myeloid Leukemia.
J. Med. Chem., 61, 2018
7CHT
DownloadVisualize
BU of 7cht by Molmil
Crystal structure of TTK kinase domain in complex with compound 30
分子名称: 2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-4-(oxan-4-ylamino)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK, MAGNESIUM ION
著者Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Ko, E.H, Choi, H.G, Son, J.B, Kim, N.D.
登録日2020-07-06
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CHM
DownloadVisualize
BU of 7chm by Molmil
Crystal structure of TTK kinase domain in complex with compound 8
分子名称: 4-(cyclohexylamino)-2-[(2-methoxy-4-morpholin-4-ylcarbonyl-phenyl)amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
著者Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
登録日2020-07-06
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CHN
DownloadVisualize
BU of 7chn by Molmil
Crystal structure of TTK kinase domain in complex with compound 9
分子名称: 4-(cyclohexylamino)-2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
著者Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
登録日2020-07-06
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CLH
DownloadVisualize
BU of 7clh by Molmil
Crystal structure of TTK kinase domain in complex with compound 19
分子名称: 2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-4-(methylamino)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
著者Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
登録日2020-07-21
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CJA
DownloadVisualize
BU of 7cja by Molmil
Crystal structure of TTK kinase domain in complex with compound 28
分子名称: 4-(cyclopentylmethylamino)-2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
著者Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
登録日2020-07-09
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CIL
DownloadVisualize
BU of 7cil by Molmil
Crystal structure of TTK kinase domain in complex with compound 7
分子名称: 4-(cyclohexylamino)-2-[(1-methylpyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
著者Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
登録日2020-07-07
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
3WUV
DownloadVisualize
BU of 3wuv by Molmil
Structure basis of inactivating cell abscission with chimera peptide 2
分子名称: Centrosomal protein of 55 kDa, peptide from Programmed cell death 6-interacting protein
著者Kim, H.J, Matsuura, A, Lee, H.H.
登録日2014-05-05
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural and biochemical insights into the role of testis-expressed gene 14 (TEX14) in forming the stable intercellular bridges of germ cells.
Proc.Natl.Acad.Sci.USA, 112, 2015
3WUU
DownloadVisualize
BU of 3wuu by Molmil
Structure basis of inactivating cell abscission with chimera peptide 1
分子名称: Centrosomal protein of 55 kDa, TEX-14
著者Kim, H.J, Matsuura, A, Lee, H.H.
登録日2014-05-05
公開日2015-07-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.904 Å)
主引用文献Structural and biochemical insights into the role of testis-expressed gene 14 (TEX14) in forming the stable intercellular bridges of germ cells.
Proc.Natl.Acad.Sci.USA, 112, 2015
8HFB
DownloadVisualize
BU of 8hfb by Molmil
Evolved variant of quercetin 2,4-dioxygenase from Bacillus subtilis
分子名称: 1,2-ETHANEDIOL, GLYCEROL, NICKEL (II) ION, ...
著者Eom, H, Song, W.J.
登録日2022-11-10
公開日2023-03-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Underlying Role of Hydrophobic Environments in Tuning Metal Elements for Efficient Enzyme Catalysis.
J.Am.Chem.Soc., 145, 2023
3WUT
DownloadVisualize
BU of 3wut by Molmil
Structure basis of inactivating cell abscission
分子名称: Centrosomal protein of 55 kDa, GLYCEROL, Inactive serine/threonine-protein kinase TEX14
著者Kim, H.J, Matsuura, A, Lee, H.H.
登録日2014-05-05
公開日2015-07-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural and biochemical insights into the role of testis-expressed gene 14 (TEX14) in forming the stable intercellular bridges of germ cells.
Proc.Natl.Acad.Sci.USA, 112, 2015
3SH5
DownloadVisualize
BU of 3sh5 by Molmil
Calcium-bound Laminin G like domain 3 from human perlecan
分子名称: CALCIUM ION, LG3 peptide
著者Van Le, B, Kim, K.K.
登録日2011-06-16
公開日2011-12-14
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of the LG3 Domain of Endorepellin, an Angiogenesis Inhibitor.
J.Mol.Biol., 414, 2011
3SH4
DownloadVisualize
BU of 3sh4 by Molmil
Laminin G like domain 3 from human perlecan
分子名称: LG3 peptide
著者Van Le, B, Kim, K.K.
登録日2011-06-15
公開日2011-12-14
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of the LG3 Domain of Endorepellin, an Angiogenesis Inhibitor.
J.Mol.Biol., 414, 2011
5Z59
DownloadVisualize
BU of 5z59 by Molmil
Crystal structure of Tk-PTP in the inactive form
分子名称: Protein-tyrosine phosphatase
著者Ku, B, Yun, H.Y, Kim, S.J.
登録日2018-01-17
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
5Z5B
DownloadVisualize
BU of 5z5b by Molmil
Crystal structure of Tk-PTP in the G95A mutant form
分子名称: CHLORIDE ION, FORMIC ACID, Protein-tyrosine phosphatase
著者Ku, B, Yun, H.Y, Kim, S.J.
登録日2018-01-17
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
5Z5A
DownloadVisualize
BU of 5z5a by Molmil
Crystal structure of Tk-PTP in the active form
分子名称: Protein-tyrosine phosphatase, VANADATE ION
著者Ku, B, Yun, H.Y, Kim, S.J.
登録日2018-01-17
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
6KBM
DownloadVisualize
BU of 6kbm by Molmil
Crystal structure of Vac8 bound to Atg13
分子名称: Autophagy-related protein 13, Vacuolar protein 8
著者Park, J, Lee, C.
登録日2019-06-25
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Quaternary structures of Vac8 differentially regulate the Cvt and PMN pathways.
Autophagy, 16, 2020
6KBN
DownloadVisualize
BU of 6kbn by Molmil
Crystal structure of Vac8 (del 19-33) bound to Atg13
分子名称: Autophagy-related protein 13, Vacuolar protein 8
著者Park, J, Lee, C.
登録日2019-06-25
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Quaternary structures of Vac8 differentially regulate the Cvt and PMN pathways.
Autophagy, 16, 2020
7DIB
DownloadVisualize
BU of 7dib by Molmil
Crystal structure of D-threonine aldolase from Filomicrobium marinum
分子名称: D-threonine aldolase
著者Seo, H, Kim, K.-J.
登録日2020-11-18
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cbeta-Selective Aldol Addition of d-Threonine Aldolase by Spatial Constraint of Aldehyde Binding.
Acs Catalysis, 11, 2021
3H0T
DownloadVisualize
BU of 3h0t by Molmil
Hepcidin-Fab complex
分子名称: Fab fragment, Heavy chain, Light chain, ...
著者Syed, R, Li, V.
登録日2009-04-10
公開日2009-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Hepcidin revisited, disulfide connectivity, dynamics, and structure.
J.Biol.Chem., 284, 2009
7VFN
DownloadVisualize
BU of 7vfn by Molmil
Crystal structure of SdgB (SD peptide-binding form)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFM
DownloadVisualize
BU of 7vfm by Molmil
Crystal structure of SdgB (UDP and SD peptide-binding form)
分子名称: Glycosyl transferase, group 1 family protein, SER-ASP-SER-ASP, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFL
DownloadVisualize
BU of 7vfl by Molmil
Crystal structure of SdgB (UDP, NAG, and O-glycosylated SD peptide-binding form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon