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3A9X
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Crystal structure of rat selenocysteine lyase
分子名称: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
著者Omi, R, Hirotsu, K.
登録日2009-11-08
公開日2010-03-16
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
6Q1M
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BU of 6q1m by Molmil
Crystal structure of the wheat dwarf virus Rep domain
分子名称: GLYCEROL, Replication-associated protein
著者Litzau, L.A, Everett, B.A, Evans III, R.L, Shi, K, Tompkins, K, Gordon, W.R.
登録日2019-08-05
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Crystal structure of the Wheat dwarf virus Rep domain.
Acta Crystallogr.,Sect.F, 75, 2019
8FZC
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BU of 8fzc by Molmil
HIV-2 Gag Capsid from Immature Virus-like Particles
分子名称: Spacer peptide 2
著者Talledge, N, Zhang, W, Mansky, L.M.
登録日2023-01-28
公開日2023-06-07
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献HIV-2 Immature Particle Morphology Provides Insights into Gag Lattice Stability and Virus Maturation.
J.Mol.Biol., 435, 2023
5B1H
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BU of 5b1h by Molmil
Crystal structure of cystathionine beta-synthase from Lactobacillus plantarum
分子名称: Cystathionine beta-synthase, GLYCEROL, SULFATE ION
著者Matoba, Y, Sugiyama, M.
登録日2015-12-04
公開日2016-12-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum
Protein Sci., 26, 2017
1IFA
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BU of 1ifa by Molmil
THREE-DIMENSIONAL CRYSTAL STRUCTURE OF RECOMBINANT MURINE INTERFERON-BETA
分子名称: ASPARAGINE, INTERFERON-BETA
著者Mitsui, Y, Senda, T, Matsuda, S, Kawano, G, Nakamura, K.T, Shimizu, H.
登録日1991-10-29
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Three-dimensional crystal structure of recombinant murine interferon-beta.
EMBO J., 11, 1992
5B1I
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BU of 5b1i by Molmil
Crystal structure of K42A mutant of cystathionine beta-synthase from Lactobacillus plantarum in a complex with L-methionine
分子名称: Cystathionine beta-synthase, N-[(3-HYDROXY-2-METHYL-5-{[(TRIHYDROXYPHOSPHORANYL)OXY]METHYL}PYRIDIN-4-YL)METHYLENE]METHIONINE, SULFATE ION
著者Matoba, Y, Sugiyama, M.
登録日2015-12-04
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum
Protein Sci., 26, 2017
6WE1
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BU of 6we1 by Molmil
Wheat dwarf virus Rep domain complexed with a single-stranded DNA 8-mer comprising the cleavage site
分子名称: DNA (5'-D(*AP*AP*TP*AP*TP*TP*AP*C)-3'), MANGANESE (II) ION, Replication-associated protein
著者Tompkins, K, Litzau, L.A, Pornschloegl, L, Nelson, A.T, Evans III, R.L, Gordon, W.R.
登録日2020-04-01
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.612 Å)
主引用文献Molecular underpinnings of ssDNA specificity by Rep HUH-endonucleases and implications for HUH-tag multiplexing and engineering.
Nucleic Acids Res., 49, 2021
6WE0
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BU of 6we0 by Molmil
Wheat dwarf virus Rep domain complexed with a single-stranded DNA 10-mer comprising the cleavage site
分子名称: DNA (5'-D(*TP*AP*AP*TP*AP*TP*TP*AP*CP*C)-3'), MANGANESE (II) ION, Replication-associated protein
著者Tompkins, K, Litzau, L.A, Shi, K, Nelson, A, Evans III, R.L, Gordon, W.R.
登録日2020-04-01
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular underpinnings of ssDNA specificity by Rep HUH-endonucleases and implications for HUH-tag multiplexing and engineering.
Nucleic Acids Res., 49, 2021
6WDZ
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BU of 6wdz by Molmil
Porcine circovirus 2 Rep domain complexed with a single-stranded DNA 10-mer comprising the cleavage site
分子名称: 1,2-ETHANEDIOL, ATP-dependent helicase Rep, DNA (5'-D(*TP*AP*GP*TP*AP*TP*TP*AP*CP*C)-3'), ...
著者Litzau, L.A, Tompkins, K, Shi, K, Nelson, A, Evans III, R.L, Gordon, W.R.
登録日2020-04-01
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Molecular underpinnings of ssDNA specificity by Rep HUH-endonucleases and implications for HUH-tag multiplexing and engineering.
Nucleic Acids Res., 49, 2021
6LE4
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BU of 6le4 by Molmil
Crystal structure of cystathionine gamma-lyase from Lactobacillus plantarum complexed with cystathionine
分子名称: (2~{S})-4-[(2~{R})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]sulfanyl-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]butanoic acid, Cystathionine gamma-lyase, PHOSPHATE ION
著者Oda, K, Matoba, Y.
登録日2019-11-24
公開日2020-10-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Catalytic specificity of the Lactobacillus plantarum cystathionine gamma-lyase presumed by the crystallographic analysis.
Sci Rep, 10, 2020
6LDO
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BU of 6ldo by Molmil
Crystal structure of cystathionine gamma-lyase from Lactobacillus plantarum complexed with L-serine
分子名称: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine, Cystathionine gamma-lyase, PHOSPHATE ION
著者Oda, K, Matoba, Y.
登録日2019-11-22
公開日2020-10-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Catalytic specificity of the Lactobacillus plantarum cystathionine gamma-lyase presumed by the crystallographic analysis.
Sci Rep, 10, 2020
1WU3
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BU of 1wu3 by Molmil
Crystal structure of recombinant murine interferon beta
分子名称: Interferon beta
著者Senda, T, Saitoh, S, Mitsui, Y.
登録日2004-12-01
公開日2004-12-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Refined crystal structure of recombinant murine interferon-beta at 2.15 A resolution
J.Mol.Biol., 253, 1995
7KII
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BU of 7kii by Molmil
Muscovy duck circovirus Rep domain complexed with a single-stranded DNA 10-mer comprising the cleavage site and Mn2+
分子名称: ATP-dependent helicase Rep, CALCIUM ION, DNA (5'-D(*TP*AP*TP*TP*AP*TP*TP*AP*CP*C)-3'), ...
著者Tompkins, K.J, Gordon, W.R, Shi, K.
登録日2020-10-23
公開日2021-11-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Watson-Crick Base-Pairing Requirements for ssDNA Recognition and Processing in Replication-Initiating HUH Endonucleases.
Mbio, 14, 2023
7KIJ
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BU of 7kij by Molmil
Muscovy duck circovirus Rep domain complexed with a single-stranded DNA 10-mer comprising the cleavage site
分子名称: ATP-dependent helicase Rep, DNA (5'-D(*TP*AP*TP*TP*AP*TP*TP*AP*CP*C)-3'), GLYCEROL, ...
著者Tompkins, K.J, Gordon, W.R, Shi, K.
登録日2020-10-23
公開日2021-11-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Watson-Crick Base-Pairing Requirements for ssDNA Recognition and Processing in Replication-Initiating HUH Endonucleases.
Mbio, 14, 2023
7KIK
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BU of 7kik by Molmil
Wheat dwarf virus Rep domain circular permutation complexed with a single-stranded DNA 10-mer comprising the cleavage site and Mn2+
分子名称: DNA (5'-D(*TP*AP*AP*TP*AP*TP*TP*AP*CP*C)-3'), MANGANESE (II) ION, Replication-associated protein
著者Tompkins, K.J, Gordon, W.R, Shi, K, Litzau, L.A.
登録日2020-10-23
公開日2021-11-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Watson-Crick Base-Pairing Requirements for ssDNA Recognition and Processing in Replication-Initiating HUH Endonucleases.
Mbio, 14, 2023
1WTC
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BU of 1wtc by Molmil
Crystal Structure of S.pombe Serine Racemase complex with AMPPCP
分子名称: Hypothetical protein C320.14 in chromosome III, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Goto, M, Miyahara, I, Hirotsu, K.
登録日2004-11-22
公開日2005-11-01
最終更新日2014-05-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a homolog of mammalian serine racemase from Schizosaccharomyces pombe
J.Biol.Chem., 284, 2009
6CA4
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BU of 6ca4 by Molmil
Crystal structure of humanized D. rerio TDP2 by 14 mutations
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, MALONATE ION, ...
著者Shi, K, Aihrara, H.
登録日2018-01-29
公開日2018-05-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.623 Å)
主引用文献New fluorescence-based high-throughput screening assay for small molecule inhibitors of tyrosyl-DNA phosphodiesterase 2 (TDP2).
Eur J Pharm Sci, 118, 2018
2ZR8
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BU of 2zr8 by Molmil
Crystal Structure of Modified Serine Racemase complexed with Serine
分子名称: MAGNESIUM ION, N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE, SERINE, ...
著者Goto, M.
登録日2008-08-25
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a homolog of mammalian serine racemase from Schizosaccharomyces pombe
J.Biol.Chem., 284, 2009
2ZPU
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BU of 2zpu by Molmil
Crystal Structure of Modified Serine Racemase from S.pombe.
分子名称: MAGNESIUM ION, N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE, Uncharacterized protein C320.14
著者Goto, M.
登録日2008-07-29
公開日2009-04-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Serine racemase with catalytically active lysinoalanyl residue.
J.Biochem., 145, 2009
8SNI
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BU of 8sni by Molmil
Hydroxynitrile Lyase from Hevea brasiliensis with Forty Mutations
分子名称: (S)-hydroxynitrile lyase, 1,2-ETHANEDIOL, BENZOIC ACID, ...
著者Walsh, M.E, Greenberg, L.R, Kazlauskas, R.J, Pierce, C.T, Aihara, H, Evans, R.L, Shi, K.
登録日2023-04-27
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献To be published
To Be Published
2NBU
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BU of 2nbu by Molmil
Solution structure of the Rad23 ubiquitin-like (UBL) domain
分子名称: UV excision repair protein RAD23
著者Chen, X, Walters, K.J.
登録日2016-03-12
公開日2016-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
2NBW
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BU of 2nbw by Molmil
Solution structure of the Rpn1 T1 site with the Rad23 UBL domain
分子名称: 26S proteasome regulatory subunit RPN1, UV excision repair protein RAD23
著者Chen, X, Walters, K.J.
登録日2016-03-14
公開日2016-07-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
2NBV
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BU of 2nbv by Molmil
Solution structure of the Rpn13 Pru domain engaging the hPLIC2 UBL domain
分子名称: Proteasomal ubiquitin receptor ADRM1, Ubiquilin-2
著者Chen, X, Walters, K.J.
登録日2016-03-12
公開日2016-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
6LYI
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BU of 6lyi by Molmil
Crystal structure of a N-methyltransferase CkTbS from Camellia assamica var. kucha
分子名称: N-methyltransferase CkTbS
著者Wang, Y, Zhang, Z.M.
登録日2020-02-14
公開日2020-03-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Identification and characterization of N9-methyltransferase involved in converting caffeine into non-stimulatory theacrine in tea.
Nat Commun, 11, 2020
6LYH
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Crystal structure of tea N9-methyltransferase CkTcS in complex with SAH and 1,3,7-trimethyluric acid
分子名称: 1,3,7-trimethyl-9H-purine-2,6,8-trione, N-methyltransferase CkTcS, S-ADENOSYL-L-HOMOCYSTEINE
著者Wang, Y, Zhang, Z.-M.
登録日2020-02-14
公開日2020-03-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.15000319 Å)
主引用文献Identification and characterization of N9-methyltransferase involved in converting caffeine into non-stimulatory theacrine in tea.
Nat Commun, 11, 2020

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