6WDZ

Porcine circovirus 2 Rep domain complexed with a single-stranded DNA 10-mer comprising the cleavage site

Summary for 6WDZ

• Entry DOI: 10.2210/pdb6wdz/pdb
• Descriptor: DNA (5'-D(*TP*AP*GP*TP*AP*TP*TP*AP*CP*C)-3'), ATP-dependent helicase Rep, MANGANESE (II) ION, ... (5 entities in total)
• Functional Keywords: huh-tag, huh motif, rep domain, viral protein, single stranded dna, ssdna, ssdna binding, replication, dna binding protein, replication-dna complex, replication/dna
• Biological source: Porcine circovirus 2 (PCV2); More
• Total number of polymer chains: 7
• Total formula weight: 52144.94

Authors

Litzau, L.A.,Tompkins, K.,Shi, K.,Nelson, A.,Evans III, R.L.,Gordon, W.R. (deposition date: 2020-04-01, release date: 2020-12-16, Last modification date: 2023-10-18)

• Primary citation: Tompkins, K.J.,Houtti, M.,Litzau, L.A.,Aird, E.J.,Everett, B.A.,Nelson, A.T.,Pornschloegl, L.,Limon-Swanson, L.K.,Evans, R.L.,Evans, K.,Shi, K.,Aihara, H.,Gordon, W.R.; Molecular underpinnings of ssDNA specificity by Rep HUH-endonucleases and implications for HUH-tag multiplexing and engineering.; Nucleic Acids Res., 49:1046-1064, 2021; PubMed: 33410911; DOI: 10.1093/nar/gkaa1248

Experimental method

X-RAY DIFFRACTION (2.03 Å)