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7NV0
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BU of 7nv0 by Molmil
Human Pol Kappa holoenzyme with wt PCNA
分子名称: DNA Primer, DNA Template, DNA polymerase kappa, ...
著者Lancey, C, De Biasio, A, Hamdan, S.M.
登録日2021-03-15
公開日2021-11-10
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of human Pol kappa bound to DNA and mono-ubiquitylated PCNA.
Nat Commun, 12, 2021
3QXP
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BU of 3qxp by Molmil
CDK2 in complex with inhibitor RC-3-89
分子名称: 1,2-ETHANEDIOL, 4-{[4-amino-5-(2-nitrobenzoyl)-1,3-thiazol-2-yl]amino}benzenesulfonamide, Cyclin-dependent kinase 2
著者Betzi, S, Alam, R, Han, H, Becker, A, Schonbrunn, E.
登録日2011-03-02
公開日2012-10-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Development of highly potent and selective diaminothiazole inhibitors of cyclin-dependent kinases.
J.Med.Chem., 56, 2013
7QNP
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BU of 7qnp by Molmil
Designed Armadillo repeat protein N(A4)M4C(AII) co-crystallized with hen egg white lysozyme
分子名称: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, Designed Armadillo Repeat Protein N(A4)M4C(AII), ...
著者Michel, E, Mittl, P.R.E, Plueckthun, A.
登録日2021-12-21
公開日2022-06-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.586 Å)
主引用文献Improved Repeat Protein Stability by Combined Consensus and Computational Protein Design.
Biochemistry, 62, 2023
7NYD
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BU of 7nyd by Molmil
cryoEM structure of 2C9-sMAC
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Menny, A, Couves, E.C, Bubeck, D.
登録日2021-03-22
公開日2021-10-06
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of soluble membrane attack complex packaging for clearance.
Nat Commun, 12, 2021
7Q8T
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BU of 7q8t by Molmil
Crystal structure of NAMPT bound to ligand TSY535(compound 9a)
分子名称: Nicotinamide phosphoribosyltransferase, SULFATE ION, [(2~{R},3~{S},4~{R},5~{S})-3,4-bis(oxidanyl)-5-[4-[[[4-(phenylsulfonyl)phenyl]carbamoylamino]methyl]phenyl]oxolan-2-yl]methyl dihydrogen phosphate
著者Kraemer, A, Tang, S, Butterworth, S, Knapp, S, Structural Genomics Consortium (SGC)
登録日2021-11-11
公開日2021-11-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Chemistry-led investigations into the mode of action of NAMPT activators, resulting in the discovery of non-pyridyl class NAMPT activators.
Acta Pharm Sin B, 13, 2023
4QH3
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BU of 4qh3 by Molmil
X-ray structure of the adduct formed between bovine pancreatic ribonuclease and trans-dimethylamine methylamine dichlorido platinum(II)
分子名称: Ribonuclease pancreatic, bis(chloranyl)-(dimethylamino)-(methylamino)platinum
著者Russo Krauss, I, Merlino, A.
登録日2014-05-26
公開日2014-07-30
最終更新日2014-08-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Interactions between Anticancer trans-Platinum Compounds and Proteins: Crystal Structures and ESI-MS Spectra of Two Protein Adducts of trans-(Dimethylamino)(methylamino)dichloridoplatinum(II).
Inorg.Chem., 53, 2014
4EIC
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BU of 4eic by Molmil
Crystal structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002 at ultra-high resolution
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome c6, HEME C
著者Krzywda, S, Bialek, W, Jaskolski, M, Szczepaniak, A.
登録日2012-04-05
公開日2013-04-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (0.84 Å)
主引用文献Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function.
To be Published
4QHG
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BU of 4qhg by Molmil
Crystal structure of Methanocaldococcus jannaschii dimeric selecase
分子名称: GLYCEROL, Uncharacterized protein MJ1213, ZINC ION
著者Lopez-pelegrin, M, Cerda-costa, N, Cintas-pedrola, A, Herranz-trillo, F, Bernado, P, Peinado, J.R, Arolas, J.L, Gomis-ruth, F.X.
登録日2014-05-28
公開日2014-07-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Multiple stable conformations account for reversible concentration-dependent oligomerization and autoinhibition of a metamorphic metallopeptidase
Angew.Chem.Int.Ed.Engl., 53, 2014
5J4M
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BU of 5j4m by Molmil
Crystal structure of shaft pilin SpaA from Lactobacillus rhamnosus GG - E269A/D295N double mutant
分子名称: Cell surface protein SpaA
著者Chaurasia, P, Pratap, S, von Ossowski, I, Palva, A, Krishnan, V.
登録日2016-04-01
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit
Sci Rep, 6, 2016
3R2Y
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BU of 3r2y by Molmil
MK2 kinase bound to Compound 1
分子名称: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE, MALONATE ION, MAP kinase-activated protein kinase 2
著者Oubrie, A, Leonard, P.
登録日2011-03-15
公開日2011-05-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure-based lead identification of ATP-competitive MK2 inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
4QI9
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BU of 4qi9 by Molmil
Crystal structure of dihydrofolate reductase from Yersinia pestis complexed with methotrexate
分子名称: Dihydrofolate reductase, METHOTREXATE
著者Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-05-30
公開日2014-07-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.297 Å)
主引用文献Crystal structure of dihydrofolate reductase from Yersinia pestis complexed with methotrexate
To be Published
5J73
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BU of 5j73 by Molmil
De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity
分子名称: protein design 2L4HC2_9
著者Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G.
登録日2016-04-05
公開日2016-05-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Science, 352, 2016
4QJV
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BU of 4qjv by Molmil
The X-ray crystal structure of Rpo3/Rpo11 heterodimer of euryarchaeal RNA polymerase from Thermococcus kodakarensis
分子名称: DNA-directed RNA polymerase subunit D, DNA-directed RNA polymerase subunit L, PHOSPHATE ION
著者Hirata, A, Murakami, K.S.
登録日2014-06-05
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration
Nat Commun, 5, 2014
5J8L
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BU of 5j8l by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy L-tagatose, using a crystal grown in microgravity
分子名称: 1-deoxy-L-tagatose, 1-deoxy-beta-L-tagatopyranose, D-tagatose 3-epimerase, ...
著者Yoshida, H, Yoshihara, A, Izumori, K, Kamitori, S.
登録日2016-04-08
公開日2016-04-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
5J8N
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BU of 5j8n by Molmil
Exonuclease III homologue Mm3148 from Methanosarcina mazei
分子名称: Exodeoxyribonuclease III, MAGNESIUM ION, TETRAETHYLENE GLYCOL
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2016-04-08
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structure of the archael ExoIII homologue Mm3148 at 1.4 Angstrom
To Be Published
4QAM
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BU of 4qam by Molmil
Crystal Structure of the RPGR RCC1-like domain in complex with the RPGR-interacting domain of RPGRIP1
分子名称: GLYCEROL, MAGNESIUM ION, X-linked retinitis pigmentosa GTPase regulator, ...
著者Remans, K, Buerger, M, Vetter, I.R, Wittinghofer, A.
登録日2014-05-05
公開日2014-07-30
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献C2 domains as protein-protein interaction modules in the ciliary transition zone.
Cell Rep, 8, 2014
7NYO
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BU of 7nyo by Molmil
Mutant A541L of SH3 domain of JNK-interacting Protein 1 (JIP1)
分子名称: 1,2-ETHANEDIOL, SH3 domain of JNK-interacting Protein 1 (JIP1), SULFATE ION, ...
著者Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
登録日2021-03-23
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NZC
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BU of 7nzc by Molmil
First SH3 domain of POSH (Plenty of SH3 Domains protein)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, E3 ubiquitin-protein ligase SH3RF1
著者Palencia, A, Bessa, L.M, Jensen, M.R.
登録日2021-03-23
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.111 Å)
主引用文献Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NYK
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BU of 7nyk by Molmil
SH3 domain of JNK-interacting Protein 1 (JIP1)
分子名称: SH3 domain of JNK-interacting Protein 1 (JIP1)
著者Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
登録日2021-03-22
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
5J9G
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BU of 5j9g by Molmil
Structure of Lactobacillus acidophilus glyceraldehyde-3-phosphate dehydrogenase at 2.21 angstrom resolution
分子名称: Glyceraldehyde-3-p dehydrogenase
著者Patel, D, Pappachan, A, Singh, D.D.
登録日2016-04-10
公開日2017-04-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structure of Lactobacillus acidophilus glyceraldehyde-3-phosphate dehydrogenase at 2.21 angstrom resolution.
To Be Published
7NYM
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BU of 7nym by Molmil
Mutant V517A - SH3 domain of JNK-interacting Protein 1 (JIP1)
分子名称: HEXAETHYLENE GLYCOL, PHOSPHATE ION, SH3 domain of JNK-interacting Protein 1 (JIP1), ...
著者Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
登録日2021-03-23
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.614 Å)
主引用文献Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
5J9N
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BU of 5j9n by Molmil
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 2-(methylamino)-1H-benzo[d]imidazole-5-carbohydrazide
分子名称: 2-(methylamino)-1H-benzimidazole-5-carbohydrazide, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
著者Ehrmann, F.R, Heine, A, Klebe, G.
登録日2016-04-10
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Benzimidazole-based Inhibitors as a Novel Scaffold to Inhibit Z.mobilis TGT and Study Protein Flexibility and the Contributions of Active Site Residues to Binding Affinity of lin-Benzopurines.
To be Published
7NZB
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BU of 7nzb by Molmil
Mutant V517L of the SH3 domain of JNK-interacting protein 1 (JIP1)
分子名称: PHOSPHATE ION, SH3 domain of JNK-interacting protein 1 (JIP1), TETRAETHYLENE GLYCOL
著者Perez, L.M, Ielasi, F.S, Jensen, M.R, Palencia, A.
登録日2021-03-23
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.959 Å)
主引用文献Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NYN
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BU of 7nyn by Molmil
Mutant Y526A of SH3 domain of JNK-interacting Protein 1 (JIP1)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
著者Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
登録日2021-03-23
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.537 Å)
主引用文献Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NWT
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BU of 7nwt by Molmil
Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Hill, C.H, Napthine, S, Pekarek, L, Kibe, A, Firth, A.E, Graham, S.C, Caliskan, N, Brierley, I.
登録日2021-03-17
公開日2021-12-15
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch
Nat Commun, 12, 2021

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