Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8IDY
DownloadVisualize
BU of 8idy by Molmil
human nuclear pre-60S ribosomal particle - State F
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Zhang, Y, Gao, N.
登録日2023-02-14
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8INK
DownloadVisualize
BU of 8ink by Molmil
human nuclear pre-60S ribosomal particle - State D
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Zhang, Y, Gao, N.
登録日2023-03-10
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
7WPZ
DownloadVisualize
BU of 7wpz by Molmil
Structure of PDF-2180-COV RBD binding to Bat37 ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
著者Cao, L, Wang, X, Tortorici, M.A, Veesler, D.
登録日2022-01-24
公開日2022-11-30
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Close relatives of MERS-CoV in bats use ACE2 as their functional receptors.
Nature, 612, 2022
6MBI
DownloadVisualize
BU of 6mbi by Molmil
Crystal Structure of SNX15 PX domain in domain swapped conformation form 2
分子名称: Sorting nexin-15
著者Chandra, M, Collins, B.M.
登録日2018-08-29
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.834 Å)
主引用文献Classification of the human phox homology (PX) domains based on their phosphoinositide binding specificities.
Nat Commun, 10, 2019
7DWA
DownloadVisualize
BU of 7dwa by Molmil
Structure of a novel beta-mannanase BaMan113A with mannotriose, N236Y mutation
分子名称: Endo-beta-1,4-mannanase, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose
著者Liu, W.T, Liu, W.D, Zheng, Y.Y.
登録日2021-01-15
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Functional and structural investigation of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5.
Int.J.Biol.Macromol., 182, 2021
7DW8
DownloadVisualize
BU of 7dw8 by Molmil
Structure of a novel beta-mannanase BaMan113A with mannobiose, N236Y mutation.
分子名称: Endo-beta-1,4-mannanase, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose
著者Liu, W.T, Liu, W.D, Zheng, Y.Y.
登録日2021-01-15
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Functional and structural investigation of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5.
Int.J.Biol.Macromol., 182, 2021
7DVJ
DownloadVisualize
BU of 7dvj by Molmil
Structure of beta-mannanase BaMan113A with mannobiose
分子名称: Endo-beta-1,4-mannanase, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose
著者Liu, W.T, Liu, W.D, Zheng, Y.Y.
登録日2021-01-13
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Functional and structural investigation of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5.
Int.J.Biol.Macromol., 182, 2021
7DVZ
DownloadVisualize
BU of 7dvz by Molmil
Structure of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5, N236Y mutation.
分子名称: Endo-beta-1,4-mannanase
著者Liu, W.T, Liu, W.D, Zheng, Y.Y.
登録日2021-01-15
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional and structural investigation of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5.
Int.J.Biol.Macromol., 182, 2021
7DV7
DownloadVisualize
BU of 7dv7 by Molmil
Structure of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5.
分子名称: Endo-beta-1,4-mannanase
著者Liu, W.T, Liu, W.D, Zheng, Y.Y.
登録日2021-01-12
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Functional and structural investigation of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5.
Int.J.Biol.Macromol., 182, 2021
3B61
DownloadVisualize
BU of 3b61 by Molmil
EmrE multidrug transporter, apo crystal form
分子名称: Multidrug transporter emrE
著者Chang, G, Chen, Y.J.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献X-ray structure of EmrE supports dual topology model.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B5D
DownloadVisualize
BU of 3b5d by Molmil
EmrE multidrug transporter in complex with TPP, C2 crystal form
分子名称: Multidrug transporter emrE, TETRAPHENYLPHOSPHONIUM
著者Chang, G, Chen, Y.J.
登録日2007-10-25
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献X-ray structure of EmrE supports dual topology model.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B62
DownloadVisualize
BU of 3b62 by Molmil
EmrE multidrug transporter in complex with P4P, P21 crystal form
分子名称: Multidrug transporter emrE, TETRAPHENYLPHOSPHONIUM
著者Chang, G, Chen, Y.J.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献X-ray structure of EmrE supports dual topology model.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6QSS
DownloadVisualize
BU of 6qss by Molmil
Crystal Structure of Ignicoccus islandicus malate dehydrogenase co-crystallized with 10 mM Tb-Xo4
分子名称: CHLORIDE ION, Malate dehydrogenase, TERBIUM(III) ION, ...
著者Roche, J, Girard, E, Madern, D.
登録日2019-02-21
公開日2019-07-17
最終更新日2024-01-24
実験手法SOLUTION SCATTERING (1.892 Å), X-RAY DIFFRACTION
主引用文献The archaeal LDH-like malate dehydrogenase from Ignicoccus islandicus displays dual substrate recognition, hidden allostery and a non-canonical tetrameric oligomeric organization.
J.Struct.Biol., 208, 2019
8DZB
DownloadVisualize
BU of 8dzb by Molmil
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor 11
分子名称: 3C-like proteinase nsp5, GLYCEROL, benzyl {(3S)-1-[(2S)-1-({(2S,3R)-4-(cyclopropylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-5-oxopyrrolidin-3-yl}carbamate
著者Sacco, M, Chen, Y.
登録日2022-08-06
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Development of the Safe and Broad-Spectrum Aldehyde and Ketoamide Mpro inhibitors Derived from the Constrained alpha , gamma-AA Peptide Scaffold.
Chemistry, 29, 2023
8DZC
DownloadVisualize
BU of 8dzc by Molmil
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor 17
分子名称: (3,5-difluorophenyl)methyl {(3S)-1-[(2S)-1-({(2S,3R)-4-(cyclopropylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-6-oxopiperidin-3-yl}carbamate, 3C-like proteinase nsp5, GLYCEROL
著者Sacco, M, Chen, Y.
登録日2022-08-06
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Development of the Safe and Broad-Spectrum Aldehyde and Ketoamide Mpro inhibitors Derived from the Constrained alpha , gamma-AA Peptide Scaffold.
Chemistry, 29, 2023
5VO1
DownloadVisualize
BU of 5vo1 by Molmil
DLK in complex with compound 10 (5-(1-isopropyl-5-(3-(oxetan-3-yl)-3-azabicyclo[3.1.0]hexan-6-yl)-1H-pyrazol-3-yl)-3-(trifluoromethyl)pyridin-2-amine)
分子名称: 5-{5-[(1R,5S,6r)-3-(oxetan-3-yl)-3-azabicyclo[3.1.0]hexan-6-yl]-1-(propan-2-yl)-1H-pyrazol-3-yl}-3-(trifluoromethyl)pyridin-2-amine, Mitogen-activated protein kinase kinase kinase 12
著者HARRIS, S.F, YIN, J.
登録日2017-05-01
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Selective Inhibitors of Dual Leucine Zipper Kinase (DLK, MAP3K12) with Activity in a Model of Alzheimer's Disease.
J. Med. Chem., 60, 2017
7JRE
DownloadVisualize
BU of 7jre by Molmil
Crystal structure of EV-D68 2A protease C107A mutant
分子名称: Protease 2A, ZINC ION
著者Liu, C, Lee, M.-Y, Liu, W, Wang, J.
登録日2020-08-12
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of EV-D68 2A protease C107A mutant
To Be Published
5VO2
DownloadVisualize
BU of 5vo2 by Molmil
DLK in complex with inhibitor 5-(1-isopropyl-5-(1-(oxetan-3-yl)piperidin-4-yl)-1H-pyrazol-3-yl)-3-(trifluoromethyl)pyridin-2-amine (compound 7)
分子名称: 5-{5-[1-(oxetan-3-yl)piperidin-4-yl]-1-(propan-2-yl)-1H-pyrazol-3-yl}-3-(trifluoromethyl)pyridin-2-amine, Mitogen-activated protein kinase kinase kinase 12
著者HARRIS, S.F, YIN, J.
登録日2017-05-01
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Selective Inhibitors of Dual Leucine Zipper Kinase (DLK, MAP3K12) with Activity in a Model of Alzheimer's Disease.
J. Med. Chem., 60, 2017
7WUH
DownloadVisualize
BU of 7wuh by Molmil
SARS-CoV-2 Spike in complex with Fab of m31A7
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, X, Wu, Y.-M.
登録日2022-02-08
公開日2022-03-23
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Vaccination with SARS-CoV-2 spike protein lacking glycan shields elicits enhanced protective responses in animal models.
Sci Transl Med, 14, 2022
5WYH
DownloadVisualize
BU of 5wyh by Molmil
Crystal structure of RidL(1-200) complexed with VPS29
分子名称: GLYCEROL, Interaptin, Vacuolar protein sorting-associated protein 29
著者Yao, J, Sun, Q, Jia, D.
登録日2017-01-13
公開日2018-01-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Mechanism of inhibition of retromer transport by the bacterial effector RidL.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EE0
DownloadVisualize
BU of 6ee0 by Molmil
Crystal Structure of SNX23 PX domain
分子名称: Kinesin-like protein KIF16B
著者Chandra, M, Collins, B.M.
登録日2018-08-12
公開日2018-08-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.518 Å)
主引用文献Classification of the human phox homology (PX) domains based on their phosphoinositide binding specificities.
Nat Commun, 10, 2019
6ECM
DownloadVisualize
BU of 6ecm by Molmil
Crystal Structure of SNX15 PX domain in domain swapped conformation
分子名称: SULFATE ION, Sorting nexin-15
著者Chandra, M, Collins, B.M.
登録日2018-08-08
公開日2018-08-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.353 Å)
主引用文献Classification of the human phox homology (PX) domains based on their phosphoinositide binding specificities.
Nat Commun, 10, 2019
2LY0
DownloadVisualize
BU of 2ly0 by Molmil
Solution NMR structure of the influenza A virus S31N mutant (19-49) in presence of drug M2WJ332
分子名称: (3S,5S,7S)-N-{[5-(thiophen-2-yl)-1,2-oxazol-3-yl]methyl}tricyclo[3.3.1.1~3,7~]decan-1-aminium, Membrane ion channel M2
著者Wu, Y, Wang, J, DeGrado, W.
登録日2012-09-10
公開日2013-01-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and inhibition of the drug-resistant S31N mutant of the M2 ion channel of influenza A virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MUV
DownloadVisualize
BU of 2muv by Molmil
NOE-based model of the influenza A virus M2 (19-49) bound to drug 11
分子名称: (3s,5s,7s)-N-[(5-bromothiophen-2-yl)methyl]tricyclo[3.3.1.1~3,7~]decan-1-aminium, Matrix protein 2
著者Wu, Y, Wang, J, DeGrado, W.
登録日2014-09-18
公開日2014-12-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Flipping in the Pore: Discovery of Dual Inhibitors That Bind in Different Orientations to the Wild-Type versus the Amantadine-Resistant S31N Mutant of the Influenza A Virus M2 Proton Channel.
J.Am.Chem.Soc., 136, 2014
2IEE
DownloadVisualize
BU of 2iee by Molmil
Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.
分子名称: Probable ABC transporter extracellular-binding protein yckB
著者Kuzin, A.P, Su, M, Jayaraman, S, Chen, X.C, Jang, M, Cunningham, K, Ma, C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2006-09-18
公開日2006-10-03
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of probable ABC transporter extracellular-binding protein yckB from Bacillus subtilis.
To be Published

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon