Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6KBE
DownloadVisualize
BU of 6kbe by Molmil
Structure of Deubiquitinase
分子名称: Polyubiquitin-C, Ubiquitin thioesterase
著者Lu, L.N, Liu, L, Wang, F.
登録日2019-06-24
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.339 Å)
主引用文献Met1-specific motifs conserved in OTUB subfamily of green plants enable rice OTUB1 to hydrolyse Met1 ubiquitin chains
Nat Commun, 13, 2022
6DPZ
DownloadVisualize
BU of 6dpz by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: (1R,2S)-2-{[(pyrrolidin-1-yl)sulfonyl]amino}cyclooctane-1-carboxylic acid, Beta-lactamase
著者Singh, I.
登録日2018-06-09
公開日2018-07-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Ultra-large library docking for discovering new chemotypes.
Nature, 566, 2019
6JTU
DownloadVisualize
BU of 6jtu by Molmil
Crystal structure of MHETase from Ideonella sakaiensis
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Sagong, H.-Y, Seo, H, Kim, K.-J.
登録日2019-04-12
公開日2020-04-15
最終更新日2020-10-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Decomposition of PET film by MHETase using Exo-PETase function
Acs Catalysis, 10, 2020
6K9P
DownloadVisualize
BU of 6k9p by Molmil
Structure of Deubiquitinase
分子名称: Ubiquitin, Ubiquitin thioesterase
著者Lu, L.N, Liu, L, Wang, F.
登録日2019-06-17
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Met1-specific motifs conserved in OTUB subfamily of green plants enable rice OTUB1 to hydrolyse Met1 ubiquitin chains
Nat Commun, 13, 2022
6DPT
DownloadVisualize
BU of 6dpt by Molmil
X-ray crystal structure of AmpC beta-lactamase with nanomolar inhibitor
分子名称: 3-chloro-2-hydroxy-N-{2-[(4-methyl-4H-1,2,4-triazol-3-yl)sulfanyl]phenyl}benzene-1-sulfonamide, Beta-lactamase
著者Singh, I.
登録日2018-06-09
公開日2018-07-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Ultra-large library docking for discovering new chemotypes.
Nature, 566, 2019
2N7H
DownloadVisualize
BU of 2n7h by Molmil
Hybrid structure of the Type 1 Pilus of Uropathogenic E.coli
分子名称: FimA
著者Habenstein, B, Loquet, A, Giller, K, Vasa, S, Becker, S, Habeck, M, Lange, A.
登録日2015-09-11
公開日2015-09-23
最終更新日2015-10-14
実験手法SOLID-STATE NMR
主引用文献Hybrid Structure of the Type 1 Pilus of Uropathogenic Escherichia coli.
Angew.Chem.Int.Ed.Engl., 54, 2015
7EO0
DownloadVisualize
BU of 7eo0 by Molmil
FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY C4
分子名称: Ig heavy chain variable region, Ig lamda chain variable region, O/TIBET/99 VP1, ...
著者He, Y, Li, K.
登録日2021-04-21
公開日2021-08-18
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Two Cross-Protective Antigen Sites on Foot-and-Mouth Disease Virus Serotype O Structurally Revealed by Broadly Neutralizing Antibodies from Cattle.
J.Virol., 95, 2021
6IMM
DownloadVisualize
BU of 6imm by Molmil
Cryo-EM structure of an alphavirus, Sindbis virus
分子名称: Assembly protein E3, Octadecane, Spike glycoprotein E1, ...
著者Zhang, X, Ma, J, Chen, L.
登録日2018-10-23
公開日2019-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Implication for alphavirus host-cell entry and assembly indicated by a 3.5 angstrom resolution cryo-EM structure.
Nat Commun, 9, 2018
5BW0
DownloadVisualize
BU of 5bw0 by Molmil
The crystal structure of minor pseudopilin binary complex of XcpV and XcpW from the Type 2 secretion system of Pseudomonas aeruginosa
分子名称: SULFATE ION, Type II secretion system protein I, Type II secretion system protein J
著者Zhang, Y, Faucher, F, Poole, K, Jia, Z.
登録日2015-06-05
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-guided disruption of the pseudopilus tip complex inhibits the Type II secretion in Pseudomonas aeruginosa.
PLoS Pathog., 14, 2018
4Y5T
DownloadVisualize
BU of 4y5t by Molmil
Structure of FtmOx1 apo with metal Iron
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COBALT (II) ION, FE (II) ION, ...
著者Yan, W, Zhang, Y.
登録日2015-02-12
公開日2015-11-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Endoperoxide formation by an alpha-ketoglutarate-dependent mononuclear non-haem iron enzyme.
Nature, 527, 2015
4Y5S
DownloadVisualize
BU of 4y5s by Molmil
Structure of FtmOx1 with a-Ketoglutarate as co-substrate
分子名称: 2-OXOGLUTARIC ACID, COBALT (II) ION, FE (II) ION, ...
著者Yan, W, Zhang, Y.
登録日2015-02-12
公開日2015-11-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.543 Å)
主引用文献Endoperoxide formation by an alpha-ketoglutarate-dependent mononuclear non-haem iron enzyme.
Nature, 527, 2015
5Y7L
DownloadVisualize
BU of 5y7l by Molmil
Solution structure of Hbeta4 extracellular loop of BK potassium channel
分子名称: Calcium-activated potassium channel subunit beta-4
著者Wang, Y, Lan, W, Ding, J, Cao, C.
登録日2017-08-17
公開日2018-08-01
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of extracellular loop of human beta 4 subunit of BK channel and its biological implication on ChTX sensitivity.
Sci Rep, 8, 2018
4Z93
DownloadVisualize
BU of 4z93 by Molmil
BRD4 bromodomain 2 in complex with gamma-carboline-containing compound, number 18.
分子名称: 1,2-ETHANEDIOL, 1-(3-cyclopropyl-5-methyl-1H-pyrazol-4-yl)-7-(3,5-dimethyl-1,2-oxazol-4-yl)-8-methoxy-5H-pyrido[4,3-b]indole, Bromodomain-containing protein 4
著者Meagher, J.L, Stuckey, J.A.
登録日2015-04-09
公開日2015-07-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Structure-Based Design of gamma-Carboline Analogues as Potent and Specific BET Bromodomain Inhibitors.
J.Med.Chem., 58, 2015
5DIL
DownloadVisualize
BU of 5dil by Molmil
Crystal structure of the effector domain of the NS1 protein from influenza virus B
分子名称: IODIDE ION, Non-structural protein 1
著者Guan, R, Hamilton, K, Ma, L, Montelione, G.T.
登録日2015-09-01
公開日2016-08-10
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献A Second RNA-Binding Site in the NS1 Protein of Influenza B Virus.
Structure, 24, 2016
6LFZ
DownloadVisualize
BU of 6lfz by Molmil
Crystal structure of SbCGTb in complex with UDPG
分子名称: SbCGTb, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Gao, H.M, Yun, C.H.
登録日2019-12-04
公開日2020-11-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.866 Å)
主引用文献Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants.
Proc.Natl.Acad.Sci.USA, 117, 2020
2GMX
DownloadVisualize
BU of 2gmx by Molmil
Selective Aminopyridine-Based C-Jun N-terminal Kinase inhibitors with cellular activity
分子名称: C-jun-amino-terminal kinase-interacting protein 1, Mitogen-activated protein kinase 8, N-(4-AMINO-5-CYANO-6-ETHOXYPYRIDIN-2-YL)-2-(4-BROMO-2,5-DIMETHOXYPHENYL)ACETAMIDE, ...
著者Abad-Zapatero, C.
登録日2006-04-07
公開日2006-06-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Aminopyridine-Based c-Jun N-Terminal Kinase Inhibitors with Cellular Activity and Minimal Cross-Kinase Activity.
J.Med.Chem., 49, 2006
3O17
DownloadVisualize
BU of 3o17 by Molmil
Crystal Structure of JNK1-alpha1 isoform
分子名称: C-Jun-amino-terminal kinase-interacting protein 1, JIP1, 10MER PEPTIDE, ...
著者Abad-Zapatero, C.
登録日2010-07-20
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of JNK1-alpha1 isoform
TO BE PUBLISHED
7JXH
DownloadVisualize
BU of 7jxh by Molmil
HER2 in complex with JBJ-08-178-01
分子名称: (2E)-N-[3-cyano-7-ethoxy-4-({3-methyl-4-[([1,2,4]triazolo[1,5-a]pyridin-7-yl)oxy]phenyl}amino)quinolin-6-yl]-4-(dimethylamino)but-2-enamide, Receptor tyrosine-protein kinase erbB-2
著者Beyett, T.S, Eck, M.J.
登録日2020-08-27
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.27 Å)
主引用文献A Novel HER2-Selective Kinase Inhibitor Is Effective in HER2 Mutant and Amplified Non-Small Cell Lung Cancer.
Cancer Res., 82, 2022
7E3Z
DownloadVisualize
BU of 7e3z by Molmil
Non-Ribosomal Peptide Synthetases, Thioesterase
分子名称: CHLORIDE ION, thioesterase
著者Jung, Y.E, Cha, S.S.
登録日2021-02-09
公開日2021-12-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Unprecedented Noncanonical Features of the Nonlinear Nonribosomal Peptide Synthetase Assembly Line for WS9326A Biosynthesis.
Angew.Chem.Int.Ed.Engl., 60, 2021
7EKV
DownloadVisualize
BU of 7ekv by Molmil
Crystal Structure of human Pin1 complexed with a covalent inhibitor
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 8-(2-chloroacetyl)-4-((5-phenylfuran-2-yl)methyl)-1-thia-4,8-diazaspiro[4.5]decan-3-one, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Liu, L, Li, J.
登録日2021-04-06
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Computational and Structure-Based Development of High Potent Cell-Active Covalent Inhibitor Targeting the Peptidyl-Prolyl Isomerase NIMA-Interacting-1 (Pin1).
J.Med.Chem., 65, 2022
7EFJ
DownloadVisualize
BU of 7efj by Molmil
Crystal Structure Analysis of human PIN1
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 8-(2-chloroacetyl)-4-(furan-2-ylmethyl)-1-thia-4,8-diazaspiro[4.5]decan-3-one, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Liu, L, Li, J.
登録日2021-03-21
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.992 Å)
主引用文献Computational and Structure-Based Development of High Potent Cell-Active Covalent Inhibitor Targeting the Peptidyl-Prolyl Isomerase NIMA-Interacting-1 (Pin1).
J.Med.Chem., 65, 2022
3O2M
DownloadVisualize
BU of 3o2m by Molmil
Crystal Structure of JNK1-alpha1 isoform complex with a biaryl tetrazol (A-82118)
分子名称: C-Jun-amino-terminal kinase-interacting protein 1, JIP1, 10MER PEPTIDE, ...
著者Abad-Zapatero, C.
登録日2010-07-22
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery and characterization of non-ATP site inhibitors of the mitogen activated protein (MAP) kinases.
Acs Chem.Biol., 6, 2011
8GPD
DownloadVisualize
BU of 8gpd by Molmil
Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed penicillin V
分子名称: (2R,4S)-5,5-dimethyl-2-[(1R)-2-oxidanyl-2-oxidanylidene-1-(2-phenoxyethanoylamino)ethyl]-1,3-thiazolidine-4-carboxylic acid, Metallo beta lactamase NDM-1, POTASSIUM ION, ...
著者Shi, X, Dai, Y, Zhang, Q, Liu, W.
登録日2022-08-26
公開日2023-08-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Interplay between the beta-lactam side chain and an active-site mobile loop of NDM-1 in penicillin hydrolysis as a potential target for mechanism-based inhibitor design.
Int.J.Biol.Macromol., 262, 2024
8GPC
DownloadVisualize
BU of 8gpc by Molmil
Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed ampicillin
分子名称: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Metallo beta lactamase NDM-1, SODIUM ION, ...
著者Shi, X, Dai, Y, Zhang, Q, Liu, W.
登録日2022-08-26
公開日2023-08-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Interplay between the beta-lactam side chain and an active-site mobile loop of NDM-1 in penicillin hydrolysis as a potential target for mechanism-based inhibitor design.
Int.J.Biol.Macromol., 262, 2024
8GPE
DownloadVisualize
BU of 8gpe by Molmil
Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed penicillin G
分子名称: (2R,4S)-2-{(R)-carboxy[(phenylacetyl)amino]methyl}-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Metallo beta lactamase NDM-1, POTASSIUM ION, ...
著者Shi, X, Dai, Y, Zhang, Q, Liu, W.
登録日2022-08-26
公開日2023-08-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Interplay between the beta-lactam side chain and an active-site mobile loop of NDM-1 in penicillin hydrolysis as a potential target for mechanism-based inhibitor design.
Int.J.Biol.Macromol., 262, 2024

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon