Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6LZ1
DownloadVisualize
BU of 6lz1 by Molmil
Structure of S.pombe alpha-mannosidase Ams1
分子名称: Ams1, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-02-17
公開日2020-09-09
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of fission yeast tetrameric alpha-mannosidase Ams1.
Febs Open Bio, 10, 2020
6AR6
DownloadVisualize
BU of 6ar6 by Molmil
Clostridioides difficile toxinB with DLD-4 darpin
分子名称: DLD-4 darpin, Toxin B
著者Zhang, J, Jiang, M.
登録日2017-08-21
公開日2018-08-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Clostridioides difficile toxinB with DLD-4 darpin
To Be Published
2GMJ
DownloadVisualize
BU of 2gmj by Molmil
Structure of Porcine Electron Transfer Flavoprotein-Ubiquinone Oxidoreductase
分子名称: Electron transfer flavoprotein-ubiquinone oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Zhang, J, Frerman, F.E, Kim, J.-J.P.
登録日2006-04-06
公開日2006-10-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of electron transfer flavoprotein-ubiquinone oxidoreductase and electron transfer to the mitochondrial ubiquinone pool.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2GMH
DownloadVisualize
BU of 2gmh by Molmil
Structure of Porcine Electron Transfer Flavoprotein-Ubiquinone Oxidoreductase in Complexed with Ubiquinone
分子名称: 1,2-ETHANEDIOL, 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, Electron transfer flavoprotein-ubiquinone oxidoreductase, ...
著者Zhang, J, Frerman, F.E, Kim, J.-J.P.
登録日2006-04-06
公開日2006-10-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of electron transfer flavoprotein-ubiquinone oxidoreductase and electron transfer to the mitochondrial ubiquinone pool.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5SVD
DownloadVisualize
BU of 5svd by Molmil
Nop9, a new PUF-like protein, prevents premature pre-rRNA cleavage to correctly process mature 18S rRNA
分子名称: Nucleolar protein 9
著者Zhang, J, Qiu, C, Hall, T.
登録日2016-08-05
公開日2016-10-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Nop9 is a PUF-like protein that prevents premature cleavage to correctly process pre-18S rRNA.
Nat Commun, 7, 2016
5T9P
DownloadVisualize
BU of 5t9p by Molmil
Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate
分子名称: CHLORIDE ION, Ribosome biogenesis protein 15, SULFATE ION
著者Zhang, J, Gonzalez, E.L, Hall, M.T.T.
登録日2016-09-09
公開日2016-11-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate.
Nucleic Acids Res., 45, 2017
7V9G
DownloadVisualize
BU of 7v9g by Molmil
Native BEN4 domain of protein Bend3 with DNA
分子名称: BEN domain-containing protein 3, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*TP*GP*C)-3')
著者Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
登録日2021-08-25
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9I
DownloadVisualize
BU of 7v9i by Molmil
The Monomer mutant of BEN4 domain of protein Bend3 with DNA
分子名称: BEN domain-containing protein 3, DNA (5'-D(*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*T)-3')
著者Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
登録日2021-08-25
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9H
DownloadVisualize
BU of 7v9h by Molmil
The BEN3 domain of protein Bend3
分子名称: BEN domain-containing protein 3
著者Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
登録日2021-08-25
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.692 Å)
主引用文献Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9F
DownloadVisualize
BU of 7v9f by Molmil
Selenomethionine mutant (L740Sem) of BEN4 domain of protein Bend3 with DNA
分子名称: BEN domain-containing protein 3, CITRIC ACID, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), ...
著者Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
登録日2021-08-25
公開日2022-02-16
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
4LCK
DownloadVisualize
BU of 4lck by Molmil
Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA
分子名称: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ...
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2013-06-21
公開日2013-07-31
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA.
Nature, 500, 2013
5Z8H
DownloadVisualize
BU of 5z8h by Molmil
APC with an inhibitor
分子名称: Adenomatous polyposis coli protein, GLYCEROL, Peptide inhibitor
著者Zhang, J, Yang, X.Y, Song, K.
登録日2018-01-31
公開日2019-02-06
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献APC with an inhibitor
To Be Published
5X16
DownloadVisualize
BU of 5x16 by Molmil
Sirt6 apo structure
分子名称: GLYCEROL, NAD-dependent protein deacetylase sirtuin-6, TERTIARY-BUTYL ALCOHOL, ...
著者Zhang, J, Huang, Z, Song, K.
登録日2017-01-24
公開日2018-07-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Sirt6 apo structure
To Be Published
5ZY9
DownloadVisualize
BU of 5zy9 by Molmil
Structural basis for a tRNA synthetase
分子名称: (1R,2R)-2-[(2S,4E,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadeca-4,6-dien-2-yl]cyclopentanecarboxylic acid, Threonyl-tRNA synthase, ZINC ION
著者Zhang, J.
登録日2018-05-23
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for inhibition of translational functions on a tRNA synthetase
To Be Published
3STA
DownloadVisualize
BU of 3sta by Molmil
Crystal structure of ClpP in tetradecameric form from Staphylococcus aureus
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Zhang, J, Ye, F, Lan, L, Jiang, H, Luo, C, Yang, C.-G.
登録日2011-07-09
公開日2011-09-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics
J.Biol.Chem., 286, 2011
7VQO
DownloadVisualize
BU of 7vqo by Molmil
Cryo-EM structure of Ams1 bound to the FW domain of Nbr1
分子名称: Ams1, Nbr1 and malE fusion protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2021-10-20
公開日2022-07-06
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.19 Å)
主引用文献Structural mechanism of protein recognition by the FW domain of autophagy receptor Nbr1
Nat Commun, 13, 2022
7V5H
DownloadVisualize
BU of 7v5h by Molmil
VcOrn native structure with N terminal tag
分子名称: Oligoribonuclease
著者Zhang, J, Zhang, Q, Bartlam, M.
登録日2021-08-17
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of oligoribonuclease from Vibrio cholerae O1 El Tor with bound peptide.
Acta Crystallogr.,Sect.F, 77, 2021
7V9Z
DownloadVisualize
BU of 7v9z by Molmil
PaOrn Oligoribonuclease native structure
分子名称: IMIDAZOLE, Oligoribonuclease, SULFATE ION
著者Zhang, J, Zhang, Q, Bartlam, M.
登録日2021-08-27
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献PaOrn Oligoribonuclease native structure
To Be Published
7VA3
DownloadVisualize
BU of 7va3 by Molmil
PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure
分子名称: IMIDAZOLE, MANGANESE (II) ION, Oligoribonuclease, ...
著者Zhang, J, Zhang, Q, Bartlam, M.
登録日2021-08-27
公開日2022-09-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure
To Be Published
7VA6
DownloadVisualize
BU of 7va6 by Molmil
PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure
分子名称: IMIDAZOLE, Oligoribonuclease, RNA (5'-R(P*GP*U)-3')
著者Zhang, J, Zhang, Q, Bartlam, M.
登録日2021-08-27
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure
To Be Published
7VA2
DownloadVisualize
BU of 7va2 by Molmil
PaOrn Oligoribonuclease D11A mutant with product GMP complex structure
分子名称: GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, Oligoribonuclease, ...
著者Zhang, J, Zhang, Q, Bartlam, M.
登録日2021-08-27
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献PaOrn Oligoribonuclease D11A mutant with product GMP complex structure
To Be Published
7WNN
DownloadVisualize
BU of 7wnn by Molmil
Crystal structure of Imine Reductase from Actinoalloteichus hymeniacidonis in complex with NADPH
分子名称: 3-hydroxyisobutyrate dehydrogenase-like beta-hydroxyacid dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zhang, J, Chen, R, Gao, S.
登録日2022-01-19
公開日2022-04-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Tuning an Imine Reductase for the Asymmetric Synthesis of Azacycloalkylamines by Concise Structure-Guided Engineering.
Angew.Chem.Int.Ed.Engl., 61, 2022
7ELY
DownloadVisualize
BU of 7ely by Molmil
A peptide with high affinity for B-Cell lymphoma2(Bcl-2)
分子名称: 16X_BCL
著者Fan, S, Zha, J, Wu, C.
登録日2021-04-12
公開日2021-05-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献An evolution-inspired strategy to design disulfide-rich peptides tolerant to extensive sequence manipulation.
Chem Sci, 12, 2021
7WQV
DownloadVisualize
BU of 7wqv by Molmil
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Ab08, ...
著者Zha, J, Meng, L, Zhang, X, Li, D.
登録日2022-01-26
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Spike-destructing human antibody effectively neutralizes Omicron-included SARS-CoV-2 variants with therapeutic efficacy.
Plos Pathog., 19, 2023
5J2Y
DownloadVisualize
BU of 5j2y by Molmil
Molecular insight into the regulatory mechanism of the quorum-sensing repressor RsaL in Pseudomonas aeruginosa
分子名称: DNA (26-MER), Regulatory protein
著者Zhao, J, Gan, J, Zhang, J, Kang, H, Kong, W, Zhu, M, Li, F, Song, Y, Qin, J, Liang, H.
登録日2016-03-30
公開日2017-04-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Pseudomonas aeruginosa RsaL bound to promoter DNA reaffirms its role as a global regulator involved in quorum-sensing.
Nucleic Acids Res., 45, 2017

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon