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5Z9W
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BU of 5z9w by Molmil
Ebola virus nucleoprotein-RNA complex
分子名称: Ebolavirus nucleoprotein (residues 19-406), RNA (6-MER)
著者Sugita, Y, Matsunami, H, Kawaoka, Y, Noda, T, Wolf, M.
登録日2018-02-05
公開日2018-10-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the Ebola virus nucleoprotein-RNA complex at 3.6 angstrom resolution.
Nature, 563, 2018
1WUA
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BU of 1wua by Molmil
The structure of Aplyronine A-actin complex
分子名称: (8R,9R,10R,11R,14S,18S,20S,24S)-24-{(1R,2S,3R,6R,7R,8R,9S,10E)-8-(ACETYLOXY)-6-[(N,N-DIMETHYLALANYL)OXY]-11-[FORMYL(MET HYL)AMINO]-2-HYDROXY-1,3,7,9-TETRAMETHYLUNDEC-10-ENYL}-10-HYDROXY-14,20-DIMETHOXY-9,11,15,18-TETRAMETHYL-2-OXOOXACYCLOTE TRACOSA-3,5,15,21-TETRAEN-8-YL N,N,O-TRIMETHYLSERINATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Hirata, K, Muraoka, S, Suenaga, K, Kuroda, T, Kato, K, Tanaka, H, Yamamoto, M, Takata, M, Yamada, K, Kigoshi, H.
登録日2004-12-03
公開日2006-02-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure basis for antitumor effect of aplyronine a
J.Mol.Biol., 356, 2006
2VUL
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BU of 2vul by Molmil
Thermostable mutant of ENVIRONMENTALLY ISOLATED GH11 XYLANASE
分子名称: DODECAETHYLENE GLYCOL, GH11 XYLANASE, SULFATE ION
著者Dumon, C, Varvak, A, Wall, M.A, Flint, J.E, Lewis, R.J, Lakey, J.H, Luginbuhl, P, Healey, S, Todaro, T, Desantis, G, Sun, M, Parra-Gessert, L, Tan, X, Weiner, D.P, Gilbert, H.J.
登録日2008-05-27
公開日2008-06-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Engineering Hyperthermostability Into a Gh11 Xylanase is Mediated by Subtle Changes to Protein Structure.
J.Biol.Chem., 283, 2008
2ZW0
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BU of 2zw0 by Molmil
Crystal structure of a Streptococcal protein G B1 mutant
分子名称: Protein LG, SULFATE ION
著者Watanabe, H, Matsumaru, H, Odahara, T, Suto, K, Honda, S.
登録日2008-11-26
公開日2009-03-03
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Optimizing pH response of affinity between protein G and IgG Fc: how electrostatic modulations affect protein-protein interactions.
J.Biol.Chem., 284, 2009
2ZW1
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BU of 2zw1 by Molmil
Crystal structure of a Streptococcal protein G B1 mutant
分子名称: Protein LG
著者Watanabe, H, Matsumaru, H, Odahara, T, Suto, K, Honda, S.
登録日2008-11-26
公開日2009-03-03
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Optimizing pH response of affinity between protein G and IgG Fc: how electrostatic modulations affect protein-protein interactions.
J.Biol.Chem., 284, 2009
3A3Y
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BU of 3a3y by Molmil
Crystal structure of the sodium-potassium pump with bound potassium and ouabain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, MAGNESIUM ION, ...
著者Ogawa, H, Shinoda, T, Cornelius, F, Toyoshima, C.
登録日2009-06-23
公開日2009-09-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the sodium-potassium pump (Na+,K+-ATPase) with bound potassium and ouabain.
Proc.Natl.Acad.Sci.USA, 106, 2009
1K8F
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BU of 1k8f by Molmil
CRYSTAL STRUCTURE OF THE HUMAN C-TERMINAL CAP1-ADENYLYL CYCLASE ASSOCIATED PROTEIN
分子名称: ADENYLYL CYCLASE-ASSOCIATED PROTEIN
著者Patskovsky, Y.V, Chance, M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2001-10-24
公開日2003-07-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the actin binding domain of the cyclase-associated protein.
Biochemistry, 43, 2004
6E3E
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BU of 6e3e by Molmil
Structure of RORgt in complex with a novel inverse agonist.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-[(5R)-5-[(7-fluoro-1,1-dimethyl-2,3-dihydro-1H-inden-5-yl)carbamoyl]-2-methoxy-7,8-dihydro-1,6-naphthyridin-6(5H)-yl]-5-oxopentanoic acid, Nuclear receptor ROR-gamma, ...
著者Skene, R.J, Hoffman, I.
登録日2018-07-13
公開日2019-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Retinoic Acid-Related Orphan Receptor gamma t (ROR gamma t) Agonist Structure-Based Functionality Switching Approach from In House ROR gamma t Inverse Agonist to ROR gamma t Agonist.
J.Med.Chem., 62, 2019
6E3G
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BU of 6e3g by Molmil
Structure of RORgt in complex with a novel agonist.
分子名称: (5R)-6-acetyl-2-methoxy-N-{4-[(2-methoxyphenyl)methoxy]phenyl}-5,6,7,8-tetrahydro-1,6-naphthyridine-5-carboxamide, 1,2-ETHANEDIOL, Nuclear receptor ROR-gamma, ...
著者Skene, R.J, Hoffman, I.
登録日2018-07-13
公開日2019-06-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Retinoic Acid-Related Orphan Receptor gamma t (ROR gamma t) Agonist Structure-Based Functionality Switching Approach from In House ROR gamma t Inverse Agonist to ROR gamma t Agonist.
J.Med.Chem., 62, 2019
5B0V
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BU of 5b0v by Molmil
Crystal Structure of Marburg virus VP40 Dimer
分子名称: ETHANOL, Matrix protein VP40
著者Oda, S, Bornholdt, Z.A, Abelson, D.M, Saphire, E.O.
登録日2015-11-05
公開日2016-01-20
最終更新日2016-03-09
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal Structure of Marburg Virus VP40 Reveals a Broad, Basic Patch for Matrix Assembly and a Requirement of the N-Terminal Domain for Immunosuppression
J.Virol., 90, 2015
7YNE
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BU of 7yne by Molmil
Crystal structure of fragmin domain-1 (1-160) in complex with G-form actin
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
著者Takeda, S.
登録日2022-07-30
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
6LUH
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BU of 6luh by Molmil
High resolution structure of N(omega)-hydroxy-L-arginine hydrolase
分子名称: MAGNESIUM ION, MANGANESE (II) ION, N(omega)-hydroxy-L-arginine amidinohydrolase
著者Oda, K, Matoba, Y.
登録日2020-01-28
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of an Nomega-hydroxy-L-arginine hydrolase found in the D-cycloserine biosynthetic pathway.
Acta Crystallogr D Struct Biol, 76, 2020
3PDM
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BU of 3pdm by Molmil
Hibiscus Latent Singapore virus
分子名称: Coat protein, RNA (5'-R(P*GP*AP*A)-3')
著者Tewary, S.K, Wong, S.M, Swaminathan, K.
登録日2010-10-22
公開日2011-01-12
最終更新日2024-03-20
実験手法FIBER DIFFRACTION (3.5 Å)
主引用文献Structure of Hibiscus latent Singapore virus by fiber diffraction: A non-conserved His122 contributes to coat protein stability
J.Mol.Biol., 2010
6LJC
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BU of 6ljc by Molmil
Crystal structure of fragmin F2-F3 domains (calcium and magnesium condition)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Actin-binding protein fragmin P, CALCIUM ION, ...
著者Takeda, S.
登録日2019-12-14
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Novel inter-domain Ca2+-binding site in the gelsolin superfamily protein fragmin.
J.Muscle Res.Cell.Motil., 41, 2020
6LJE
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BU of 6lje by Molmil
Crystal structure of gelsolin G3 domain (calcium and magnesium condition)
分子名称: CALCIUM ION, GLYCEROL, Gelsolin
著者Takeda, S.
登録日2019-12-14
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Novel inter-domain Ca2+-binding site in the gelsolin superfamily protein fragmin.
J.Muscle Res.Cell.Motil., 41, 2020
6BR2
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BU of 6br2 by Molmil
Structure of RORgt in complex with a novel isoquinoline inverse agonist.
分子名称: (1R)-N-(4-tert-butyl-3-fluorophenyl)-6-methoxy-2-[(3-oxo-2,3-dihydro-1,2-oxazol-5-yl)acetyl]-1,2,3,4-tetrahydroisoquinoline-1-carboxamide, (4S)-2-METHYL-2,4-PENTANEDIOL, Nuclear receptor ROR-gamma
著者Skene, R.J, Hoffman, I.
登録日2017-11-29
公開日2018-03-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Discovery of [ cis-3-({(5 R)-5-[(7-Fluoro-1,1-dimethyl-2,3-dihydro-1 H-inden-5-yl)carbamoyl]-2-methoxy-7,8-dihydro-1,6-naphthyridin-6(5 H)-yl}carbonyl)cyclobutyl]acetic Acid (TAK-828F) as a Potent, Selective, and Orally Available Novel Retinoic Acid Receptor-Related Orphan Receptor gamma t Inverse Agonist.
J. Med. Chem., 61, 2018
6BR3
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BU of 6br3 by Molmil
Structure of RORgt in complex with a novel inverse agonist TAK-828.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Nuclear receptor ROR-gamma, {cis-3-[(5R)-5-[(7-fluoro-1,1-dimethyl-1H-inden-5-yl)carbamoyl]-2-methoxy-7,8-dihydro-1,6-naphthyridine-6(5H)-carbonyl]cyclobutyl}acetic acid
著者Skene, R.J, Hoffman, I.
登録日2017-11-29
公開日2018-03-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Discovery of [ cis-3-({(5 R)-5-[(7-Fluoro-1,1-dimethyl-2,3-dihydro-1 H-inden-5-yl)carbamoyl]-2-methoxy-7,8-dihydro-1,6-naphthyridin-6(5 H)-yl}carbonyl)cyclobutyl]acetic Acid (TAK-828F) as a Potent, Selective, and Orally Available Novel Retinoic Acid Receptor-Related Orphan Receptor gamma t Inverse Agonist.
J. Med. Chem., 61, 2018
6LUG
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BU of 6lug by Molmil
Crystal structure of N(omega)-hydroxy-L-arginine hydrolase
分子名称: MANGANESE (II) ION, N(omega)-hydroxy-L-arginine amidinohydrolase
著者Oda, K, Matoba, Y.
登録日2020-01-28
公開日2020-06-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an Nomega-hydroxy-L-arginine hydrolase found in the D-cycloserine biosynthetic pathway.
Acta Crystallogr D Struct Biol, 76, 2020
5H4S
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BU of 5h4s by Molmil
Crystal structure of a rhamnose-binding lectin SUL-I from the toxopneustid sea urchin Toxopneustes pileolus
分子名称: L-rhamnose-binding lectin, PHOSPHATE ION, alpha-L-rhamnopyranose
著者Unno, H, Hatakeyama, T.
登録日2016-11-02
公開日2017-05-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Carbohydrate recognition by the rhamnose-binding lectin SUL-I with a novel three-domain structure isolated from the venom of globiferous pedicellariae of the flower sea urchin Toxopneustes pileolus
Protein Sci., 26, 2017
5YY9
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BU of 5yy9 by Molmil
Crystal structure of Tandem Tudor Domain of human UHRF1 in complex with LIG1-K126me3
分子名称: E3 ubiquitin-protein ligase UHRF1, Ligase 1
著者Kori, S, Defossez, P.A, Arita, K.
登録日2017-12-08
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.653 Å)
主引用文献Structure of the UHRF1 Tandem Tudor Domain Bound to a Methylated Non-histone Protein, LIG1, Reveals Rules for Binding and Regulation.
Structure, 27, 2019
5YYA
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BU of 5yya by Molmil
Crystal structure of Tandem Tudor Domain of human UHRF1
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase UHRF1, SULFATE ION
著者Kori, S, Defossez, P.A, Arita, K.
登録日2017-12-08
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the UHRF1 Tandem Tudor Domain Bound to a Methylated Non-histone Protein, LIG1, Reveals Rules for Binding and Regulation.
Structure, 27, 2019
6B33
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BU of 6b33 by Molmil
Structure of RORgt in complex with a novel inverse agonist 3
分子名称: (2R)-N~2~-(3-chloro-4-cyanophenyl)-N~4~-[3-(cyclopropylmethyl)-2,4-dioxo-1-(propan-2-yl)-1,2,3,4-tetrahydroquinazolin-6-yl]morpholine-2,4-dicarboxamide, Nuclear receptor ROR-gamma
著者Skene, R.J, Hoffman, I, Snell, G.
登録日2017-09-20
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Design and Synthesis of Conformationally Constrained ROR gamma t Inverse Agonists.
Chemmedchem, 2019
2RVM
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BU of 2rvm by Molmil
Solution structure of the chromodomain of HP1alpha with the phosphorylated N-terminal tail
分子名称: Chromobox protein homolog 5
著者Kawaguchi, A, Nishimura, Y.
登録日2015-12-18
公開日2016-03-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVN
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BU of 2rvn by Molmil
Solution structure of the chromodomain of HP1a with the phosphorylated N-terminal tail complexed with H3K9me3 peptide
分子名称: 18-mer peptide of Histone H3, Chromobox protein homolog 5
著者Kawaguchi, A, Nishimura, Y.
登録日2015-12-18
公開日2016-03-16
実験手法SOLUTION NMR
主引用文献Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVL
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Solution structure of the chromodomain of HP1alpha with the N-terminal tail
分子名称: Chromobox protein homolog 5
著者Kawaguchi, A, Nishimura, Y.
登録日2015-12-18
公開日2016-03-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016

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