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1CGC
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BU of 1cgc by Molmil
DOUBLE HELIX CONFORMATION GROOVE DIMENSIONS AND LIGAND BINDING POTENTIAL OF A G/C-STRETCH IN B-DNA
分子名称: DNA (5'-D(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3')
著者Heinemann, U, Bansal, M.
登録日1992-01-15
公開日1993-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Double helix conformation, groove dimensions and ligand binding potential of a G/C stretch in B-DNA.
EMBO J., 11, 1992
4KTD
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BU of 4ktd by Molmil
Fab fragment of HIV vaccine-elicited CD4bs-directed antibody, GE136, from non-human primate
分子名称: GE136 Heavy Chain Fab, GE136 Light Chain Fab, GLYCEROL, ...
著者Poulsen, C, Tran, K, Standfield, R, Wyatt, R.T.
登録日2013-05-20
公開日2014-02-05
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Vaccine-elicited primate antibodies use a distinct approach to the HIV-1 primary receptor binding site informing vaccine redesign.
Proc.Natl.Acad.Sci.USA, 111, 2014
122D
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BU of 122d by Molmil
DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR
分子名称: DNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')
著者Hahn, M, Heinemann, U.
登録日1993-05-03
公開日1993-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献DNA helix structure and refinement algorithm: comparison of models for d(CCAGGCm5CTGG) derived from NUCLSQ, TNT and X-PLOR.
Acta Crystallogr.,Sect.D, 49, 1993
123D
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BU of 123d by Molmil
DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR
分子名称: DNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')
著者Hahn, M, Heinemann, U.
登録日1993-05-03
公開日1993-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献DNA helix structure and refinement algorithm: comparison of models for d(CCAGGCm5CTGG) derived from NUCLSQ, TNT and X-PLOR.
Acta Crystallogr.,Sect.D, 49, 1993
3C41
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BU of 3c41 by Molmil
ABC protein ArtP in complex with AMP-PNP/Mg2+
分子名称: Amino acid ABC transporter (ArtP), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Thaben, P.F, Eckey, V, Scheffel, F, Saenger, W, Schneider, E, Vahedi-Faridi, A.
登録日2008-01-29
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structures of the ATP-binding cassette (ABC) Protein ArtP from Geobacillus stearothermophilus in complexes with nucleotides and nucleotide analogs reveal an intermediate semiclosed dimer in the post hydrolyses state and an asymmetry in the dimerisation region
To be Published
3C4J
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BU of 3c4j by Molmil
ABC protein ArtP in complex with ATP-gamma-S
分子名称: Amino acid ABC transporter (ArtP), MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Thaben, P.F, Eckey, V, Scheffel, F, Saenger, W, Schneider, E, Vahedi-Faridi, A.
登録日2008-01-30
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal Structures of the ATP-binding cassette (ABC) Protein ArtP from Geobacillus stearothermophilus in complexes with nucleotides and nucleotide analogs reveal an intermediate semiclosed dimer in the post hydrolyses state and an asymmetry in the dimerisation region
To be Published
2Z9A
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BU of 2z9a by Molmil
Crystal Structure of Human Saposin C Dimer in Open Conformation
分子名称: GLYCEROL, Proactivator polypeptide
著者Rossmann, M, Saenger, W, Maier, T.
登録日2007-09-18
公開日2008-04-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of human saposins C and d: implications for lipid recognition and membrane interactions.
Structure, 16, 2008
3GYH
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BU of 3gyh by Molmil
Crystal Structure Analysis of S. Pombe ATL in complex with damaged DNA containing POB
分子名称: 1-PYRIDIN-3-YLBUTAN-1-ONE, Alkyltransferase-like protein 1, DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3'), ...
著者Tubbs, J.L, Arvai, A.S, Tainer, J.A, Shin, D.S.
登録日2009-04-03
公開日2009-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Flipping of alkylated DNA damage bridges base and nucleotide excision repair.
Nature, 459, 2009
7EKB
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BU of 7ekb by Molmil
Crystal structure of 4E10 modified with pyrene acetamide
分子名称: ACETATE ION, Fab region of the heavy chain of broadly neutralizing antibody anti-HIV-1 4E10, Fab region of the light chain of the broadly neutralizing anti-HIV-1 antibody 4E10, ...
著者Caaveiro, J.M.M, Rujas, E, Nieva, J.L.
登録日2021-04-05
公開日2021-08-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Focal accumulation of aromaticity at the CDRH3 loop mitigates 4E10 polyreactivity without altering its HIV neutralization profile.
Iscience, 24, 2021
7EKK
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BU of 7ekk by Molmil
Anti-HIV-1 broadly neutralizing antibody delta-loop 4E10 modified with pyrene acetamide
分子名称: AMMONIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Caaveiro, J.M.M, Rujas, E, Nieva, J.L.
登録日2021-04-05
公開日2021-08-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Focal accumulation of aromaticity at the CDRH3 loop mitigates 4E10 polyreactivity without altering its HIV neutralization profile.
Iscience, 24, 2021
5JDT
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BU of 5jdt by Molmil
Structure of Spin-labelled T4 lysozyme mutant L118C-R1 at 100K
分子名称: AZIDE ION, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
著者Loll, B, Consentius, P, Gohlke, U, Mueller, R, Kaupp, M, Heinemann, U, Wahl, M.C, Risse, T.
登録日2016-04-17
公開日2016-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Tracking Transient Conformational States of T4 Lysozyme at Room Temperature Combining X-ray Crystallography and Site-Directed Spin Labeling.
J.Am.Chem.Soc., 138, 2016
6U9U
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BU of 6u9u by Molmil
Structure of GM9_TH8seq732127 FAB
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, GM9_TH8seq732127 FAB heavy chain, ...
著者Singh, S, Liban, T.J, Pancera, M.
登録日2019-09-09
公開日2019-11-06
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Extensive dissemination and intraclonal maturation of HIV Env vaccine-induced B cell responses.
J.Exp.Med., 217, 2020
6U3Z
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BU of 6u3z by Molmil
Structure of VD20_5A4 Fab
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Dionne, G, Shapiro, L.
登録日2019-08-22
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.99002314 Å)
主引用文献Extensive dissemination and intraclonal maturation of HIV Env vaccine-induced B cell responses.
J.Exp.Med., 217, 2020
4IUM
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BU of 4ium by Molmil
Equine arteritis virus papain-like protease 2 (PLP2) covalently bound to ubiquitin
分子名称: GLYCEROL, Ubiquitin, ZINC ION, ...
著者Bailey-Elkin, B.A, James, T.W, Mark, B.L.
登録日2013-01-21
公開日2013-02-13
最終更新日2013-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Deubiquitinase function of arterivirus papain-like protease 2 suppresses the innate immune response in infected host cells.
Proc.Natl.Acad.Sci.USA, 110, 2013
3LS3
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BU of 3ls3 by Molmil
Padron0.9-ON (fluorescent state)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Padron0.9, ...
著者Brakemann, T, Weber, G, Trowitzsch, S, Wahl, M.C, Jakobs, S.
登録日2010-02-12
公開日2010-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Molecular basis of the light-driven switching of the photochromic fluorescent protein Padron.
J.Biol.Chem., 285, 2010
6TEO
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BU of 6teo by Molmil
Crystal structure of a yeast Snu114-Prp8 complex
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-splicing factor 8, ...
著者Ganichkin, O, Jia, J, Loll, B, Absmeier, E, Wahl, M.C.
登録日2019-11-12
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A Snu114-GTP-Prp8 module forms a relay station for efficient splicing in yeast.
Nucleic Acids Res., 48, 2020
5CSW
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BU of 5csw by Molmil
B-RAF in complex with Dabrafenib
分子名称: CHLORIDE ION, Dabrafenib, Serine/threonine-protein kinase B-raf
著者Bader, G, Stadtmuller, H, Steurer, S.
登録日2015-07-23
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献A Novel RAF Kinase Inhibitor with DFG-Out-Binding Mode: High Efficacy in BRAF-Mutant Tumor Xenograft Models in the Absence of Normal Tissue Hyperproliferation.
Mol.Cancer Ther., 15, 2016
5CSX
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BU of 5csx by Molmil
CRYSTAL STRUCTURE OF B-RAF IN COMPLEX WITH BI 882370
分子名称: N-(3-{5-[(1-ethylpiperidin-4-yl)(methyl)amino]-3-(pyrimidin-5-yl)-1H-pyrrolo[3,2-b]pyridin-1-yl}-2,4-difluorophenyl)propane-1-sulfonamide, Serine/threonine-protein kinase B-raf, alpha-D-glucopyranose
著者Bader, G, Stadtmuller, H, Steurer, S.
登録日2015-07-23
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献A Novel RAF Kinase Inhibitor with DFG-Out-Binding Mode: High Efficacy in BRAF-Mutant Tumor Xenograft Models in the Absence of Normal Tissue Hyperproliferation.
Mol.Cancer Ther., 15, 2016
6EK4
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BU of 6ek4 by Molmil
PaxB from Photorhabdus luminescens
分子名称: PaxB, SODIUM ION
著者Braeuning, B, Groll, M.
登録日2017-09-25
公開日2018-05-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and mechanism of the two-component alpha-helical pore-forming toxin YaxAB.
Nat Commun, 9, 2018
6EL1
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BU of 6el1 by Molmil
YaxAB pore complex
分子名称: YaxA, YaxB
著者Braeuning, B, Bertosin, E, Dietz, H, Groll, M.
登録日2017-09-27
公開日2018-05-16
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Structure and mechanism of the two-component alpha-helical pore-forming toxin YaxAB.
Nat Commun, 9, 2018
6EK7
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BU of 6ek7 by Molmil
YaxA from Yersinia enterocolitica
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, YaxA
著者Braeuning, B, Groll, M.
登録日2017-09-25
公開日2018-05-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and mechanism of the two-component alpha-helical pore-forming toxin YaxAB.
Nat Commun, 9, 2018
3CUJ
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BU of 3cuj by Molmil
Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with sulfur substituted beta-1,4 xylopentaose.
分子名称: Exo-beta-1,4-glucanase, beta-D-xylopyranose-(1-4)-4-thio-beta-D-xylopyranose-(1-4)-4-thio-beta-D-xylopyranose-(1-4)-4-thio-beta-D-xylopyranose-(1-4)-4-thio-beta-D-xylopyranose
著者Kuntz, D.A, Saul, M, Rose, D.R.
登録日2008-04-16
公開日2009-04-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Probing the binding sites of Family 10 and 11 Xylanases with extended Oligosaccharides
to be published
3CUF
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BU of 3cuf by Molmil
Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellobiose-like isofagomine
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside, Exo-beta-1,4-glucanase
著者Kuntz, D.A, Saul, M, Rose, D.R.
登録日2008-04-16
公開日2009-04-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Probing the binding sites of Family 10 and 11 Xylanases with extended Oligosaccharides
to be published
3CUG
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BU of 3cug by Molmil
Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotetraose-like isofagomine
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranoside, Exo-beta-1,4-glucanase
著者Kuntz, D.A, Saul, M, Rose, D.R.
登録日2008-04-16
公開日2009-04-21
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Probing the binding sites of Family 10 and 11 Xylanases with extended Oligosaccharides
to be published
3CUH
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BU of 3cuh by Molmil
Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotriose-like isofagomine
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl 4-O-beta-D-glucopyranosyl-beta-D-glucopyranoside, Exo-beta-1,4-glucanase
著者Kuntz, D.A, Saul, M, Rose, D.R.
登録日2008-04-16
公開日2009-04-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Probing the binding sites of Family 10 and 11 Xylanases with extended Oligosaccharides
to be published

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