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2ZJP
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BU of 2zjp by Molmil
Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans
分子名称: 4-(hydroxymethyl)-3-methyl-1H-indole-2-carboxylic acid, 50S RIBOSOMAL PROTEIN L11, 50S RIBOSOMAL PROTEIN L13, ...
著者Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P.
登録日2008-03-07
公開日2008-06-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Translational Regulation Via L11: Molecular Switches on the Ribosome Turned on and Off by Thiostrepton and Micrococcin.
Mol.Cell, 30, 2008
2ZJR
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BU of 2zjr by Molmil
Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans
分子名称: 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P.
登録日2008-03-08
公開日2008-06-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin.
Mol.Cell, 30, 2008
2ZJQ
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BU of 2zjq by Molmil
Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunit
分子名称: 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P.
登録日2008-03-08
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin.
Mol.Cell, 30, 2008
6ZX9
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BU of 6zx9 by Molmil
Crystal structure of SIV Vpr,fused to T4 lysozyme, isolated from moustached monkey, bound to human DDB1 and human DCAF1 (amino acid residues 1046-1396)
分子名称: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, GLYCEROL, ...
著者Schwefel, D, Banchenko, S.
登録日2020-07-29
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.519729 Å)
主引用文献Structural insights into Cullin4-RING ubiquitin ligase remodelling by Vpr from simian immunodeficiency viruses.
Plos Pathog., 17, 2021
6ZUE
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BU of 6zue by Molmil
Crystal structure of human DDB1 bound to human DCAF1 (amino acid residues 1046-1396)
分子名称: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1
著者Schwefel, D, Taylor, I.A.
登録日2020-07-22
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.094 Å)
主引用文献Structural insights into Cullin4-RING ubiquitin ligase remodelling by Vpr from simian immunodeficiency viruses.
Plos Pathog., 17, 2021
4CXH
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BU of 4cxh by Molmil
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
分子名称: 18S RRNA - H44, 18S RRNA - H5-H14, 18S RRNA - H8, ...
著者Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T.
登録日2014-04-07
公開日2014-07-16
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement.
Cell(Cambridge,Mass.), 158, 2014
4CXG
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BU of 4cxg by Molmil
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
分子名称: 18S RRNA - H44, 18S RRNA - H5-H14, 18S RRNA - H8, ...
著者Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T.
登録日2014-04-07
公開日2014-07-16
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement.
Cell(Cambridge,Mass.), 158, 2014
4UJE
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BU of 4uje by Molmil
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
分子名称: 18S Ribosomal RNA, 28S Ribosomal RNA, 40S RIBOSOMAL PROTEIN S10, ...
著者Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T.
登録日2014-04-05
公開日2014-07-16
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement.
Cell(Cambridge,Mass.), 158, 2014
4V68
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BU of 4v68 by Molmil
T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Schuette, J.-C, Spahn, C.M.T.
登録日2008-12-11
公開日2014-07-09
最終更新日2025-03-26
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献GTPase activation of elongation factor EF-Tu by the ribosome during decoding
Embo J., 28, 2009
8RCT
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BU of 8rct by Molmil
Escherichia coli paused disome complex (Rotated disome interface class 2)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-07
公開日2024-03-06
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (5.32 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8RCM
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BU of 8rcm by Molmil
Escherichia coli paused disome complex (Non-rotated disome interface class 2)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-06
公開日2024-03-06
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8RCS
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BU of 8rcs by Molmil
Escherichia coli paused disome complex (Rotated disome interface class 1)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-07
公開日2024-03-06
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (4.46 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8RCL
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BU of 8rcl by Molmil
Escherichia coli paused disome complex (Non-rotated disome interface class 1)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-06
公開日2024-03-13
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
6RWX
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BU of 6rwx by Molmil
Periplasmic inner membrane ring of the Shigella type 3 secretion system
分子名称: Lipoprotein MxiJ, Protein MxiG
著者Kamprad, A, Lunelli, M.
登録日2019-06-06
公開日2020-02-12
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Cryo-EM structure of the Shigella type III needle complex.
Plos Pathog., 16, 2020
6RWK
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BU of 6rwk by Molmil
MxiD N0 N1 and MxiG C-terminal domains of the Shigella type 3 secretion system
分子名称: Outer membrane protein MxiD, Protein MxiG
著者Kamprad, A, Lunelli, M.
登録日2019-06-05
公開日2020-02-12
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Cryo-EM structure of the Shigella type III needle complex.
Plos Pathog., 16, 2020
5LM9
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BU of 5lm9 by Molmil
Structure of E. coli NusA
分子名称: MAGNESIUM ION, SULFATE ION, Transcription termination/antitermination protein NusA
著者Said, N, Weber, G, Santos, K, Wahl, M.C.
登録日2016-07-29
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.143 Å)
主引用文献Structural basis for lambda N-dependent processive transcription antitermination.
Nat Microbiol, 2, 2017
6RWY
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BU of 6rwy by Molmil
Export apparatus core and inner rod of the Shigella type 3 secretion system
分子名称: Inner rod protein, Protein MxiH, Surface presentation of antigens protein SpaP, ...
著者Lunelli, M, Kamprad, A.
登録日2019-06-06
公開日2020-02-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (5.11 Å)
主引用文献Cryo-EM structure of the Shigella type III needle complex.
Plos Pathog., 16, 2020
5MS0
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BU of 5ms0 by Molmil
pseudo-atomic model of the RNA polymerase lambda-based antitermination complex solved by cryo-EM
分子名称: 30S ribosomal protein S10, Antitermination protein N, DNA-directed RNA polymerase subunit alpha, ...
著者Said, N, Krupp, F.
登録日2016-12-29
公開日2017-05-03
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Structural basis for lambda N-dependent processive transcription antitermination.
Nat Microbiol, 2, 2017
5LM7
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BU of 5lm7 by Molmil
Crystal structure of the lambda N-Nus factor complex
分子名称: 30S ribosomal protein S10, Antitermination protein N, N utilization substance protein B homolog, ...
著者Said, N, Santos, K, Weber, G, Wahl, M.C.
登録日2016-07-29
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structural basis for lambda N-dependent processive transcription antitermination.
Nat Microbiol, 2, 2017
6SWA
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BU of 6swa by Molmil
Mus musculus brain neocortex ribosome 60S bound to Ebp1
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Kraushar, M.L, Sprink, T.
登録日2019-09-20
公開日2020-09-30
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Protein Synthesis in the Developing Neocortex at Near-Atomic Resolution Reveals Ebp1-Mediated Neuronal Proteostasis at the 60S Tunnel Exit.
Mol.Cell, 81, 2021
1JQT
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BU of 1jqt by Molmil
Fitting of L11 protein in the low resolution cryo-EM map of E.coli 70S ribosome
分子名称: 50S Ribosomal protein L11
著者Agrawal, R.K, Linde, J, Segupta, J, Nierhaus, K.H, Frank, J.
登録日2001-08-07
公開日2001-09-07
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation.
J.Mol.Biol., 311, 2001
8PEG
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BU of 8peg by Molmil
Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-13
公開日2024-03-06
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8PKL
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BU of 8pkl by Molmil
Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-26
公開日2024-03-06
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8R3V
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BU of 8r3v by Molmil
Escherichia coli paused disome complex (non-rotated disome interface)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-11-10
公開日2024-03-06
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8QYX
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BU of 8qyx by Molmil
Human 60S ribosomal subunit
分子名称: 1,4-DIAMINOBUTANE, 28S rRNA, 5.8S rRNA, ...
著者Wiechert, F, Schacherl, M, Sprink, T.
登録日2023-10-26
公開日2024-12-11
最終更新日2025-01-22
実験手法ELECTRON MICROSCOPY (1.78 Å)
主引用文献Visualizing the modification landscape of the human 60S ribosomal subunit at close to atomic resolution.
Nucleic Acids Res., 53, 2025

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件を2025-07-09に公開中

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