Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7YDI
DownloadVisualize
BU of 7ydi by Molmil
SARS-CoV-2 Spike (6P) in complex with 3 R1-32 Fabs and 3 ACE2, focused refinement of RBD region
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32, Light chain of R1-32, ...
著者Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
登録日2022-07-04
公開日2022-08-24
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.98 Å)
主引用文献SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
7YDY
DownloadVisualize
BU of 7ydy by Molmil
SARS-CoV-2 Spike (6P) in complex with 1 R1-32 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, ...
著者Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
登録日2022-07-04
公開日2022-08-24
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.75 Å)
主引用文献SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
7YEG
DownloadVisualize
BU of 7yeg by Molmil
SARS-CoV-2 Spike (6P) in complex with 3 R1-32 Fabs and 3 ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
登録日2022-07-05
公開日2022-08-24
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
7YE5
DownloadVisualize
BU of 7ye5 by Molmil
SARS-CoV-2 Spike (6P) in complex with 2 R1-32 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, ...
著者Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
登録日2022-07-05
公開日2022-08-24
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (6.75 Å)
主引用文献SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
6PB4
DownloadVisualize
BU of 6pb4 by Molmil
The E. coli class-II CAP-dependent transcription activation complex with de novo RNA transcript at the state 2
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Shi, W.
登録日2019-06-13
公開日2020-03-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.35 Å)
主引用文献Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
6PB5
DownloadVisualize
BU of 6pb5 by Molmil
The E. coli class-II CAP-dependent transcription activation complex at the state 1 architecture
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Shi, W.
登録日2019-06-13
公開日2020-03-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.52 Å)
主引用文献Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
6PB6
DownloadVisualize
BU of 6pb6 by Molmil
The E. coli class-II CAP-dependent transcription activation complex at the state 2
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Shi, W.
登録日2019-06-13
公開日2020-03-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.29 Å)
主引用文献Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
7YG7
DownloadVisualize
BU of 7yg7 by Molmil
Structure of the Spring Viraemia of Carp Virus ribonucleoprotein Complex
分子名称: Nucleoprotein, RNA (99-mer)
著者Liu, B, Wang, Z.X, Yang, T, Yu, D.Q, Ouyang, Q.
登録日2022-07-11
公開日2023-03-15
最終更新日2023-05-10
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the Spring Viraemia of Carp Virus Ribonucleoprotein Complex Reveals Its Assembly Mechanism and Application in Antiviral Drug Screening.
J.Virol., 97, 2023
8DKC
DownloadVisualize
BU of 8dkc by Molmil
P. gingivalis RNA Polymerase
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Liu, B, Bu, F.
登録日2022-07-05
公開日2023-06-21
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM Structure of Porphyromonas gingivalis RNA Polymerase.
J.Mol.Biol., 436, 2024
5LVY
DownloadVisualize
BU of 5lvy by Molmil
Structural studies of the Aggregative Adherence Fimbriae of Enteroaggregative Escherichia coli
分子名称: Adhesin protein
著者Liu, B, Matthews, S.
登録日2016-09-14
公開日2017-07-26
最終更新日2017-08-02
実験手法SOLUTION NMR
主引用文献Structural and functional studies of Escherichia coli aggregative adherence fimbriae (AAF/V) reveal a deficiency in extracellular matrix binding.
Biochim. Biophys. Acta, 1865, 2017
8WYP
DownloadVisualize
BU of 8wyp by Molmil
High Resolution Crystal Structure of Brd4 BD-1 in Complex with a Novel Inhibitor Precursor
分子名称: 3-bromanylimidazo[1,2-a]pyridin-6-amine, Bromodomain-containing protein 4
著者Liu, B, Ma, X.
登録日2023-10-31
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献High resolution crystal structure of BRD4-BD1 in complex with a novel inhibitor precursor.
Biochem.Biophys.Res.Commun., 690, 2024
8U3B
DownloadVisualize
BU of 8u3b by Molmil
Cryo-EM structure of E. coli NarL-transcription activation complex at 3.2A
分子名称: DNA (69-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Kompaniiets, D, Wang, D.
登録日2023-09-07
公開日2024-01-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural basis for transcription activation by the nitrate-responsive regulator NarL.
Nucleic Acids Res., 52, 2024
5YFE
DownloadVisualize
BU of 5yfe by Molmil
Enzymatic and structural characterization of the poly (ethylene terephthalate) hydrolase PETase from I. sakaiensis
分子名称: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
著者Bao, R, He, L.H, Liu, B.
登録日2017-09-21
公開日2018-09-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Protein Crystallography and Site-Direct Mutagenesis Analysis of the Poly(ethylene terephthalate) Hydrolase PETase from Ideonella sakaiensis.
Chembiochem, 2018
2ND4
DownloadVisualize
BU of 2nd4 by Molmil
A distinct sortase SrtB anchors and processes a streptococcal adhesin AbpA with a novel structural property
分子名称: Amylase-binding protein AbpA
著者Liu, B, Zhu, F, Wu, H, Matthews, S.
登録日2016-05-05
公開日2016-09-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A distinct sortase SrtB anchors and processes a streptococcal adhesin AbpA with a novel structural property.
Sci Rep, 6, 2016
3UIZ
DownloadVisualize
BU of 3uiz by Molmil
Crystal structure of SefD_dscA in D2O
分子名称: Chimera protein of SefD and SefA
著者Garnett, J.A, Wei-chao, L, Liu, B, Matthews, S.J.
登録日2011-11-07
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Promoting crystallisation of the Salmonella enteritidis fimbriae 14 pilin SefD using deuterium oxide.
Biochem.Biophys.Res.Commun., 421, 2012
3UIY
DownloadVisualize
BU of 3uiy by Molmil
Crystal structure of SefD_dscA in H2O
分子名称: Chimera protein of SefD and SefA
著者Garnett, J.A, Wei-chao, L, Liu, B, Matthews, S.J.
登録日2011-11-07
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Promoting crystallisation of the Salmonella enteritidis fimbriae 14 pilin SefD using deuterium oxide.
Biochem.Biophys.Res.Commun., 421, 2012
5Z1P
DownloadVisualize
BU of 5z1p by Molmil
Structural basis of the improved sweetness and stability of the single-chain sweet-tasting protein monellin (MNEI)
分子名称: Monellin chain B,Monellin chain A
著者Liu, B.
登録日2017-12-27
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure basis of the improved sweetness and thermostability of a unique double-sites single-chain sweet-tasting protein monellin (MNEI) mutant
Biochimie, 154, 2018
2M6O
DownloadVisualize
BU of 2m6o by Molmil
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
分子名称: Uncharacterized protein
著者Liu, B, Tabib-Salazar, A, Doughty, P, Lewis, R, Ghosh, S, Parsy, M, Simpson, P, Matthews, S, Paget, M.
登録日2013-04-06
公開日2013-05-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.
Nucleic Acids Res., 41, 2013
2M6P
DownloadVisualize
BU of 2m6p by Molmil
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
分子名称: uncharacterized protein Mb2076
著者Liu, B, Parsy, M, Paget, M, Matthews, S.
登録日2013-04-06
公開日2013-05-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.
Nucleic Acids Res., 41, 2013
7BOV
DownloadVisualize
BU of 7bov by Molmil
The Structure of Bacillus subtilis glycosyltransferase,Bs-YjiC
分子名称: GLYCEROL, SODIUM ION, Uncharacterized UDP-glucosyltransferase YjiC
著者Zhao, C, Liu, B, Zhao, N.L, Luo, Y.Z, Bao, R.
登録日2020-03-20
公開日2020-05-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.293 Å)
主引用文献Structural and biochemical studies of the glycosyltransferase Bs-YjiC from Bacillus subtilis.
Int.J.Biol.Macromol., 166, 2021
7BY7
DownloadVisualize
BU of 7by7 by Molmil
Bacteriophage SPO1 protein Gp46
分子名称: Putative gene 46 protein
著者Liu, B, Zhang, P.
登録日2020-04-22
公開日2021-04-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins
Proc.Natl.Acad.Sci.USA, 119, 2022
6J4C
DownloadVisualize
BU of 6j4c by Molmil
Crystal structure of MarH, an epimerase for biosynthesis of Maremycins in Streptomyces, under 10 mM ZnSO4
分子名称: ACETIC ACID, Cupin superfamily protein, GLYCEROL, ...
著者Hou, Y, Liu, B, Hu, K, Zhang, R.
登録日2019-01-08
公開日2020-01-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural basis of the mechanism of beta-methyl epimerization by enzyme MarH.
Org.Biomol.Chem., 17, 2019
6J4D
DownloadVisualize
BU of 6j4d by Molmil
Crystal structure of MarH, an epimerase for biosynthesis of Maremycins in Streptomyces, under pH 4.7, without Zn
分子名称: CITRATE ANION, Cupin superfamily protein, GLYCEROL
著者Hou, Y, Liu, B, Hu, K, Zhang, R.
登録日2019-01-08
公開日2020-01-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis for the Isomerization Mechanism of MarH
To Be Published
6J4B
DownloadVisualize
BU of 6j4b by Molmil
Crystal structure of MarH, an epimerase for biosynthesis of Maremycins in Streptomyces, under 400 mM Zinc acetate
分子名称: ACETIC ACID, Cupin superfamily protein, GLYCEROL, ...
著者Hou, Y, Liu, B, Hu, K, Zhang, R.
登録日2019-01-08
公開日2020-01-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural basis of the mechanism of beta-methyl epimerization by enzyme MarH.
Org.Biomol.Chem., 17, 2019
6L6V
DownloadVisualize
BU of 6l6v by Molmil
SPO1 Gp44 N-terminal region (1-55)
分子名称: E3 protein
著者Liu, B, Wang, Z.
登録日2019-10-29
公開日2021-05-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Bacteriophage DNA Mimic Protein Employs a Non-specific Strategy to Inhibit the Bacterial RNA Polymerase.
Front Microbiol, 12, 2021

220760

件を2024-06-05に公開中

PDB statisticsPDBj update infoContact PDBjnumon