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7WJP
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BU of 7wjp by Molmil
Structure of PadR-like protein from Listeria monocytogenes
分子名称: PadR family transcriptional regulator
著者Hong, M, Kim, J.
登録日2022-01-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-based molecular characterization of the LltR transcription factor from Listeria monocytogenes.
Biochem.Biophys.Res.Commun., 600, 2022
1Z3A
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BU of 1z3a by Molmil
Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli
分子名称: ZINC ION, tRNA-specific adenosine deaminase
著者Malashkevich, V, Kim, J, Lisbin, M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2005-03-10
公開日2006-02-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural and kinetic characterization of Escherichia coli TadA, the wobble-specific tRNA deaminase.
Biochemistry, 45, 2006
5ZW3
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BU of 5zw3 by Molmil
Crystal Structure of TrmR from B. subtilis
分子名称: MAGNESIUM ION, Putative O-methyltransferase YrrM, S-ADENOSYL-L-HOMOCYSTEINE
著者Kim, J, Ryu, H, Almo, S.C.
登録日2018-05-14
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Identification of a novel tRNA wobble uridine modifying activity in the biosynthesis of 5-methoxyuridine.
Nucleic Acids Res., 46, 2018
5ZW4
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BU of 5zw4 by Molmil
Crystal structure of tRNA bound TrmR
分子名称: PHOSPHATE ION, Putative O-methyltransferase YrrM, RNA (5'-R(*CP*CP*UP*GP*CP*UP*UP*UP*GP*CP*AP*CP*GP*CP*AP*GP*G)-3'), ...
著者Kim, J, Ryu, H, Almo, S.C.
登録日2018-05-14
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Identification of a novel tRNA wobble uridine modifying activity in the biosynthesis of 5-methoxyuridine.
Nucleic Acids Res., 46, 2018
7EQJ
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BU of 7eqj by Molmil
crystal structure of E. coli Valine tRNA
分子名称: MAGNESIUM ION, RNA (76-MER), SODIUM ION
著者Kim, J, Jeong, H.
登録日2021-05-03
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Unique anticodon loop conformation with the flipped-out wobble nucleotide in the crystal structure of unbound tRNA Val .
Rna, 27, 2021
4OGG
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BU of 4ogg by Molmil
Crystal Structure of Arabidopsis thaliana DJ-1d with glyoxylate as substrate analog
分子名称: Protein DJ-1 homolog D
著者Choi, D, Kim, J, Ryu, K.-S, Park, C.
登録日2014-01-16
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Stereospecific mechanism of DJ-1 glyoxalases inferred from their hemithioacetal-containing crystal structures.
Febs J., 281, 2014
4OFW
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BU of 4ofw by Molmil
Crystal Structure of Arabidopsis thaliana DJ-1d
分子名称: Protein DJ-1 homolog D
著者Choi, D, Kim, J, Ryu, K.-S, Park, C.
登録日2014-01-15
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Stereospecific mechanism of DJ-1 glyoxalases inferred from their hemithioacetal-containing crystal structures.
Febs J., 281, 2014
2KYK
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BU of 2kyk by Molmil
The sandwich region between two LMP2A PY motif regulates the interaction between AIP4WW2domain and PY motif
分子名称: E3 ubiquitin-protein ligase Itchy homolog
著者Seo, M, Park, S, Seok, S, Kim, J, Cha, M, Lee, B.
登録日2010-05-28
公開日2011-06-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The sandwich region between two LMP2A PY motif regulates the interaction between AIP4WW2domain and PY motif
To be Published
1MN0
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BU of 1mn0 by Molmil
Crystal structure of galactose mutarotase from lactococcus lactis complexed with D-xylose
分子名称: Aldose 1-epimerase, NICKEL (II) ION, alpha-D-xylopyranose
著者Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
登録日2002-09-04
公開日2002-09-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1MMY
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BU of 1mmy by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-quinovose
分子名称: Aldose 1-epimerase, SODIUM ION, alpha-D-quinovopyranose
著者Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
登録日2002-09-04
公開日2002-09-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1M16
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BU of 1m16 by Molmil
Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form with Amino Terminal His Tag and Leu 44 Replaced with Phe (L44F), Leu 73 Replaced with Val (L73V), Val 109 Replaced with Leu (V109L) and Cys 117 Replaced with Val (C117V).
分子名称: FORMIC ACID, SULFATE ION, acidic fibroblast growth factor
著者Brych, S.R, Kim, J, Spielmann, G.L, Logan, T.M, Blaber, M.
登録日2002-06-17
公開日2003-08-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Accommodation of a highly symmetric core within a symmetric protein superfold
Protein Sci., 12, 2003
1MMU
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BU of 1mmu by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-glucose
分子名称: Aldose 1-epimerase, SODIUM ION, beta-D-glucopyranose
著者Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
登録日2002-09-04
公開日2002-09-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
5H60
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BU of 5h60 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: MANGANESE (II) ION, Transferase, URIDINE-5'-DIPHOSPHATE
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-20
最終更新日2018-10-31
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5H61
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BU of 5h61 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: Transferase
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5H5Y
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BU of 5h5y by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: Non-LEE encoded effector protein NleB
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
7YON
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BU of 7yon by Molmil
Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者Kang, H, Park, C, Kim, J, Choi, H.-J.
登録日2022-08-01
公開日2023-03-22
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis for Y2 receptor-mediated neuropeptide Y and peptide YY signaling.
Structure, 31, 2023
7YOO
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BU of 7yoo by Molmil
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者Kang, H, Park, C, Kim, J, Choi, H.-J.
登録日2022-08-01
公開日2023-03-22
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structural basis for Y2 receptor-mediated neuropeptide Y and peptide YY signaling.
Structure, 31, 2023
6LIN
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BU of 6lin by Molmil
Crystal structure of human PDK2 complexed with GM10030
分子名称: 4-[[[4-[3,5-bis(fluoranyl)-4-(4-oxidanyl-4-oxidanylidene-butoxy)phenyl]-5-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-1,2-oxazol-3-yl]carbonylamino]methyl]benzoic acid, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Kang, J, Kim, J.
登録日2019-12-12
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural basis for the inhibition of PDK2 by novel ATP- and lipoyl-binding site targeting compounds.
Biochem.Biophys.Res.Commun., 527, 2020
8W77
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BU of 8w77 by Molmil
Human Consensus Olfactory Receptor OR52c in apo state, OR52c only
分子名称: Human Consensus Olfactory Receptor OR52c in apo state, receptor only,Soluble cytochrome b562
著者Choi, C.W, Bae, J, Choi, H.-J, Kim, J.
登録日2023-08-30
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献Understanding the molecular mechanisms of odorant binding and activation of the human OR52 family.
Nat Commun, 14, 2023
6LHU
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BU of 6lhu by Molmil
High resolution structure of FANCA C-terminal domain (CTD)
分子名称: Fanconi anemia complementation group A
著者Jeong, E, Lee, S, Shin, J, Kim, Y, Kim, J, Scharer, O, Kim, Y, Kim, H, Cho, Y.
登録日2019-12-10
公開日2020-03-25
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Structural basis of the fanconi anemia-associated mutations within the FANCA and FANCG complex.
Nucleic Acids Res., 48, 2020
6LHW
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BU of 6lhw by Molmil
Structure of N-terminal and C-terminal domains of FANCA
分子名称: Fanconi anemia complementation group A
著者Jeong, E, Lee, S, Shin, J, Kim, Y, Kim, J, Scharer, O, Kim, Y, Kim, H, Cho, Y.
登録日2019-12-10
公開日2020-03-25
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.84 Å)
主引用文献Structural basis of the fanconi anemia-associated mutations within the FANCA and FANCG complex.
Nucleic Acids Res., 48, 2020
5H63
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BU of 5h63 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: MANGANESE (II) ION, Transferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5H62
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BU of 5h62 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, Transferase, ...
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
2F0Y
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BU of 2f0y by Molmil
Crystal Structure Of Human Protein Farnesyltransferase Complexed With Farnesyl Diphosphate and hydantoin derivative
分子名称: 3-({3-[3-(1H-IMIDAZOL-1-YL)PROPYL]-5-METHYL-5-(1-NAPHTHYL)-2,4-DIOXOIMIDAZOLIDIN-1-YL}METHYL)BENZONITRILE, FARNESYL DIPHOSPHATE, Protein farnesyltransferase beta subunit, ...
著者Kim, K.H, Lee, J, Kim, J.
登録日2005-11-14
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献hydantoin derivatives as Non-pepridic inhibitors of Ras Farnesyl transferase
To be published
4FYB
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BU of 4fyb by Molmil
Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
分子名称: GLYCEROL, Thiol:disulfide interchange protein (DsbC)
著者Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
登録日2012-07-04
公開日2013-05-08
最終更新日2013-09-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013

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