Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1S9S
DownloadVisualize
BU of 1s9s by Molmil
SOLUTION STRUCTURE OF MLV PSI SITE
分子名称: MLV Psi encapsidation site
著者D'Souza, V, Dey, A, Habib, D, Summers, M.F.
登録日2004-02-05
公開日2004-04-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of the 101-nucleotide core encapsidation signal of the Moloney Murine Leukemia Virus.
J.Mol.Biol., 337, 2004
5OMH
DownloadVisualize
BU of 5omh by Molmil
p38alpha in complex with pyrazolobenzothiazine inhibitor COXH11
分子名称: 1-(3-chlorophenyl)-3-methyl-4~{H}-pyrazolo[4,3-c][1,2]benzothiazine 5,5-dioxide, Mitogen-activated protein kinase 14
著者Buehrmann, M, Rauh, D.
登録日2017-07-31
公開日2019-03-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Co-crystal structure determination and cellular evaluation of 1,4-dihydropyrazolo[4,3-c] [1,2] benzothiazine 5,5-dioxide p38 alpha MAPK inhibitors.
Biochem.Biophys.Res.Commun., 511, 2019
5KCE
DownloadVisualize
BU of 5kce by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with an N-methyl, 2-chlorobenzyl OBHS-N derivative
分子名称: (1S,2R,4S)-N-(2-chlorophenyl)-5,6-bis(4-hydroxyphenyl)-N-methyl-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, Estrogen receptor, Nuclear receptor coactivator 2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Dharmarajan, V, Goswami, D, Kastrati, I, Novick, S, Nowak, J, Zhou, H.B, Boonmuen, N, Zhao, Y, Min, J, Frasor, J, Katzenellenbogen, B.S, Griffin, P.R, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-06-06
公開日2016-11-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.847 Å)
主引用文献Full antagonism of the estrogen receptor without a prototypical ligand side chain.
Nat. Chem. Biol., 13, 2017
2QGG
DownloadVisualize
BU of 2qgg by Molmil
X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.
分子名称: 16S rRNA-processing protein rimM, POTASSIUM ION, UNKNOWN LIGAND
著者Kuzin, A.P, Su, M, Jayaraman, S, Wang, D, Janjua, H, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-06-28
公開日2007-07-17
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248.
To be Published
2QGV
DownloadVisualize
BU of 2qgv by Molmil
Crystal structure of hydrogenase-1 operon protein hyaE from Shigella flexneri. Northeast Structural Genomics Consortium Target SfR170
分子名称: Hydrogenase-1 operon protein hyaE
著者Forouhar, F, Su, M, Seetharaman, J, Benach, J, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-06-29
公開日2007-07-17
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of hydrogenase-1 operon protein hyaE from Shigella flexneri.
To be Published
1S9Q
DownloadVisualize
BU of 1s9q by Molmil
crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen
分子名称: 4-HYDROXYTAMOXIFEN, CHOLIC ACID, Estrogen-related receptor gamma
著者Greschik, H, Flaig, R, Renaud, J.P, Moras, D.
登録日2004-02-05
公開日2004-06-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for the Deactivation of the Estrogen-related Receptor {gamma} by Diethylstilbestrol or 4-Hydroxytamoxifen and Determinants of Selectivity.
J.Biol.Chem., 279, 2004
1S9Z
DownloadVisualize
BU of 1s9z by Molmil
SYNTHETIC 17 AMINO ACID LONG PEPTIDE THAT FORMS A NATIVE-LIKE COILED-COIL AT AMBIENT TEMPERATURE AND AGGREGATES INTO AMYLOID-LIKE FIBRILS AT HIGHER TEMPERATURES.
分子名称: SODIUM ION, SYNTHETIC COILED-COIL PEPTIDE, ZINC ION
著者Kammerer, R.A, Kostrewa, D, Zurdo, J, Detken, A, Garcia-Echeverria, C, Green, J.D, Muller, S.A, Meier, B.H, Winkler, F.K, Dobson, C.M, Steinmetz, M.O.
登録日2004-02-06
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Exploring amyloid formation by a de novo design
Proc.Natl.Acad.Sci.USA, 101, 2004
7NB9
DownloadVisualize
BU of 7nb9 by Molmil
E. coli NfsA with nitrofurantoin
分子名称: 1-[(~{E})-(5-nitrofuran-2-yl)methylideneamino]imidazolidine-2,4-dione, DIMETHYL SULFOXIDE, FLAVIN MONONUCLEOTIDE, ...
著者Day, M.D, Jarrom, D, Grainger, A.I, Parr, R.J, Hyde, E.I, White, S.A.
登録日2021-01-25
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
7NNX
DownloadVisualize
BU of 7nnx by Molmil
E. coli NfsA with 1,4-benzoquinone
分子名称: 1,2-ETHANEDIOL, 1,4-benzoquinone, CHLORIDE ION, ...
著者Day, M.D, Jarrom, D, Hyde, E.I, White, S.A.
登録日2021-02-25
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
5JQZ
DownloadVisualize
BU of 5jqz by Molmil
Designed two-ring homotetramer at 3.8A resolution
分子名称: De novo designed homotetramer
著者Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Oberdorfer, G, Boyken, S.E, Chen, Z.
登録日2016-05-05
公開日2016-06-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.83 Å)
主引用文献De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Science, 352, 2016
7NMP
DownloadVisualize
BU of 7nmp by Molmil
E. coli NfsA with hydroquinone
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Day, M.D, Jarrom, D, Parr, R.J, Hyde, E.I, White, S.A.
登録日2021-02-23
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
7NDW
DownloadVisualize
BU of 7ndw by Molmil
ThyX-FADH2 soaked with 20 mM Formaldehyde
分子名称: DI(HYDROXYETHYL)ETHER, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, Flavin-dependent thymidylate synthase, ...
著者Bou-Nader, C, Pecqueur, L, Hamdane, D.
登録日2021-02-02
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An enzymatic activation of formaldehyde for nucleotide methylation.
Nat Commun, 12, 2021
2QJY
DownloadVisualize
BU of 2qjy by Molmil
Crystal structure of rhodobacter sphaeroides double mutant with stigmatellin and UQ2
分子名称: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, 2-O-octyl-beta-D-glucopyranose, CHLORIDE ION, ...
著者Esser, L, Xia, D.
登録日2007-07-09
公開日2007-12-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Inhibitor-complexed Structures of the Cytochrome bc1 from the Photosynthetic Bacterium Rhodobacter sphaeroides.
J.Biol.Chem., 283, 2008
1NLD
DownloadVisualize
BU of 1nld by Molmil
FAB FRAGMENT OF A NEUTRALIZING ANTIBODY DIRECTED AGAINST AN EPITOPE OF GP41 FROM HIV-1
分子名称: FAB1583
著者Davies, C, Beauchamp, J.C, Emery, D, Rawas, A, Muirhead, H.
登録日1996-07-02
公開日1996-12-23
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the Fab fragment from a neutralizing monoclonal antibody directed against an epitope of gp41 from HIV-1.
Acta Crystallogr.,Sect.D, 53, 1997
5JVB
DownloadVisualize
BU of 5jvb by Molmil
1.95A resolution structure of PtxB from Trichodesmium erythraeum IMS101 in complex with phosphite
分子名称: PHOSPHONATE, Phosphonate ABC transporter, periplasmic phosphonate-binding protein
著者Bisson, C, Adams, N.B.P, Polyviou, D, Bibby, T.S, Hunter, C.N, Hitchcock, A.
登録日2016-05-11
公開日2017-11-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The molecular basis of phosphite and hypophosphite recognition by ABC-transporters.
Nat Commun, 8, 2017
2QVK
DownloadVisualize
BU of 2qvk by Molmil
The second Ca2+-binding domain of the Na+-Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis
分子名称: Sodium/calcium exchanger 1
著者Chaptal, V, Mercado Besserer, G, Abramson, J, Cascio, D.
登録日2007-08-08
公開日2007-11-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献The second Ca2+-binding domain of the Na+ Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis
Proc.Natl.Acad.Sci.Usa, 104, 2007
1OAI
DownloadVisualize
BU of 1oai by Molmil
Complex between Tap UBA domain and FxFG nucleoporin peptide
分子名称: FXFG NUCLEOPORIN PEPTIDE, NUCLEAR RNA EXPORT FACTOR
著者Grant, R.P, Neuhaus, D, Stewart, M.
登録日2003-01-14
公開日2003-02-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis for the Interaction between the Tap/Nxf1 Uba Domain and Fg Nucleoporins at 1 A Resolution
J.Mol.Biol., 326, 2003
2QVZ
DownloadVisualize
BU of 2qvz by Molmil
4-Chlorobenzoyl-CoA Ligase/Synthetase, I303A mutation, bound to 3-Chlorobenzoate
分子名称: 3-chlorobenzoate, 4-Chlorobenzoate CoA Ligase/Synthetase
著者Wu, R, Reger, A.S, Cao, J, Gulick, A.M, Dunaway-Mariano, D.
登録日2007-08-09
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.
Biochemistry, 46, 2007
7N9A
DownloadVisualize
BU of 7n9a by Molmil
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS RBD with NB21
分子名称: Nanobody Nb21, Spike protein S1
著者Sun, D, Zhang, C, Shi, Y.
登録日2021-06-17
公開日2021-08-04
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes
To Be Published
1SMH
DownloadVisualize
BU of 1smh by Molmil
Protein kinase A variant complex with completely ordered N-terminal helix
分子名称: (R,R)-2,3-BUTANEDIOL, N-OCTANOYL-N-METHYLGLUCAMINE, cAMP-Dependent Protein Kinase, ...
著者Breitenlechner, C, Engh, R.A, Huber, R, Kinzel, V, Bossemeyer, D, Gassel, M.
登録日2004-03-09
公開日2004-07-06
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.044 Å)
主引用文献The Typically Disordered N-Terminus of PKA Can Fold as a Helix and Project the Myristoylation Site into Solution
Biochemistry, 43, 2004
7N0Z
DownloadVisualize
BU of 7n0z by Molmil
Structure of PPM1H phosphatase with manganese ions at the active site
分子名称: MAGNESIUM ION, MANGANESE (II) ION, Protein phosphatase 1H
著者Khan, A.R, Waschbusch, D.
登録日2021-05-26
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural basis for the specificity of PPM1H phosphatase for Rab GTPases.
Embo Rep., 22, 2021
7NF2
DownloadVisualize
BU of 7nf2 by Molmil
Structure of T. atroviride Fdc variant TaFdcV in complex with prFMN crotonic acid adduct
分子名称: ACETATE ION, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
2QSJ
DownloadVisualize
BU of 2qsj by Molmil
Crystal structure of a LuxR family DNA-binding response regulator from Silicibacter pomeroyi
分子名称: DNA-binding response regulator, LuxR family
著者Bonanno, J.B, Freeman, J, Bain, K.T, Mendoza, M, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-07-31
公開日2007-08-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a LuxR family DNA-binding response regulator from Silicibacter pomeroyi.
To be Published
7NF4
DownloadVisualize
BU of 7nf4 by Molmil
Structure of A. niger Fdc T395M R435P P438W variant (AnFdcII) in complex with prFMN
分子名称: Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
7NEY
DownloadVisualize
BU of 7ney by Molmil
Structure of T. atroviride Fdc wild-type (TaFdc) in complex with prFMN
分子名称: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon