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8D6V
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BU of 8d6v by Molmil
Structure of the Mycobacterium tuberculosis 20S proteasome bound to the C-terminal GQYL motif of the ATP-bound Mpa ATPase
分子名称: Proteasome subunit alpha, Proteasome subunit beta, Proteasome-associated ATPase
著者Xiao, X, Li, H.
登録日2022-06-06
公開日2022-08-03
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation.
Msphere, 7, 2022
8D6X
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BU of 8d6x by Molmil
Structure of the Mycobacterium tuberculosis 20S proteasome bound to the ATP-bound Mpa ATPase
分子名称: AAA ATPase forming ring-shaped complexes, Proteasome subunit alpha, Proteasome subunit beta, ...
著者Xiao, X, Li, H.
登録日2022-06-06
公開日2022-08-03
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation.
Msphere, 7, 2022
8D4X
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BU of 8d4x by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a dimeric form
分子名称: E3 ubiquitin-protein ligase UBR5, ZINC ION
著者Wang, F, He, Q, Lin, G, Li, H.
登録日2022-06-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023
7RD6
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BU of 7rd6 by Molmil
Structure of the S. cerevisiae P4B ATPase lipid flippase in the E2P state
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Probable phospholipid-transporting ATPase NEO1
著者Bai, L, Jain, B.K, You, Q, Duan, H.D, Graham, T.R, Li, H.
登録日2021-07-09
公開日2021-09-29
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural basis of the P4B ATPase lipid flippase activity.
Nat Commun, 12, 2021
7RD8
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BU of 7rd8 by Molmil
Structure of the S. cerevisiae P4B ATPase lipid flippase in the E1-ATP state
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Probable phospholipid-transporting ATPase NEO1
著者Bai, L, Jain, B.K, You, Q, Duan, H.D, Graham, T.R, Li, H.
登録日2021-07-09
公開日2021-09-29
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.64 Å)
主引用文献Structural basis of the P4B ATPase lipid flippase activity.
Nat Commun, 12, 2021
7RD7
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BU of 7rd7 by Molmil
Structure of the S. cerevisiae P4B ATPase lipid flippase in the E2P-transition state
分子名称: MAGNESIUM ION, Probable phospholipid-transporting ATPase NEO1, TETRAFLUOROALUMINATE ION
著者Bai, L, Jain, B.K, You, Q, Duan, H.D, Graham, T.R, Li, H.
登録日2021-07-09
公開日2021-09-29
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Structural basis of the P4B ATPase lipid flippase activity.
Nat Commun, 12, 2021
7UQK
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BU of 7uqk by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7
著者Wang, F, Feng, X, Li, H.
登録日2022-04-19
公開日2023-02-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
7UQJ
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BU of 7uqj by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ATPgS and histone H3 tail in state II
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7, Histone H3, ...
著者Wang, F, Feng, X, Li, H.
登録日2022-04-19
公開日2023-02-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
7UQI
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BU of 7uqi by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7
著者Wang, F, Feng, X, Li, H.
登録日2022-04-19
公開日2023-02-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
7RQH
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BU of 7rqh by Molmil
Crystal Structure of carboxyl-terminal processing protease A mutant S302A, CtpA_S302A, of Pseudomonas aeruginosa
分子名称: Probable carboxyl-terminal protease
著者Hsu, H.C, Li, H.
登録日2021-08-06
公開日2022-04-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Pseudomonas aeruginosa C-Terminal Processing Protease CtpA Assembles into a Hexameric Structure That Requires Activation by a Spiral-Shaped Lipoprotein-Binding Partner.
Mbio, 13, 2022
7RPQ
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BU of 7rpq by Molmil
Crystal Structure of carboxyl-terminal processing protease A, CtpA, of Pseudomonas aeruginosa
分子名称: Probable carboxyl-terminal protease
著者Hsu, H.C, Li, H.
登録日2021-08-04
公開日2022-04-27
最終更新日2022-12-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Pseudomonas aeruginosa C-Terminal Processing Protease CtpA Assembles into a Hexameric Structure That Requires Activation by a Spiral-Shaped Lipoprotein-Binding Partner.
Mbio, 13, 2022
8D2P
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BU of 8d2p by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Target bound)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA target strand (5'-D(P*CP*CP*AP*GP*GP*AP*TP*CP*TP*TP*GP*CP*CP*AP*TP*CP*CP*TP*AP*CP*CP*TP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2N
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BU of 8d2n by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Pre-cleavage)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2K
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BU of 8d2k by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Cleavage Intermediate 2)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*GP*A)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2O
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BU of 8d2o by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Post-cleavage 2)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2L
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BU of 8d2l by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Cleavage Intermediate 1)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*GP*A)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2Q
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BU of 8d2q by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Post-cleavage 1)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
7RQF
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BU of 7rqf by Molmil
Crystal Structure of LbcA (lipoprotein binding partner of CtpA) of Pseudomonas aeruginosa
分子名称: TPR repeat-containing protein PA4667
著者Hsu, H.C, Li, H.
登録日2021-08-06
公開日2022-04-27
最終更新日2022-12-14
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Pseudomonas aeruginosa C-Terminal Processing Protease CtpA Assembles into a Hexameric Structure That Requires Activation by a Spiral-Shaped Lipoprotein-Binding Partner.
Mbio, 13, 2022
8E0Q
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BU of 8e0q by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a C2 symmetric dimeric form
分子名称: E3 ubiquitin-protein ligase UBR5, ZINC ION
著者Wang, F, He, Q, Lin, G, Li, H.
登録日2022-08-09
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023
2YSI
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BU of 2ysi by Molmil
Solution structure of the first WW domain from the mouse transcription elongation regulator 1, transcription factor CA150
分子名称: Transcription elongation regulator 1
著者Ohnishi, S, Li, H, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first WW domain from the mouse transcription elongation regulator 1, transcription factor CA150
To be Published
8EWI
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BU of 8ewi by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a tetrameric form
分子名称: E3 ubiquitin-protein ligase UBR5, ZINC ION
著者Wang, F, He, Q, Lin, G, Li, H.
登録日2022-10-23
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023
2YSF
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BU of 2ysf by Molmil
Solution structure of the fourth WW domain from the human E3 ubiquitin-protein ligase Itchy homolog, ITCH
分子名称: E3 ubiquitin-protein ligase Itchy homolog
著者Ohnishi, S, Li, H, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the fourth WW domain from the human E3 ubiquitin-protein ligase Itchy homolog, ITCH
To be Published
3KRD
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BU of 3krd by Molmil
Crystal Structure of Mycobacterium Tuberculosis Proteasome in complex with Fellutamide B
分子名称: (3R)-3-HYDROXYDODECANOIC ACID, Fellutamide B, Proteasome subunit alpha, ...
著者Li, D, Li, H.
登録日2009-11-18
公開日2010-09-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Fellutamide B is a potent inhibitor of the Mycobacterium tuberculosis proteasome.
Arch.Biochem.Biophys., 501, 2010
5BKH
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BU of 5bkh by Molmil
The splicing activity and an alternative domain-swapped structure of the Pyrococcus horikoshii PolII mini-intein
分子名称: DNA polymerase II large subunit
著者Li, Z, Li, H.
登録日2021-03-19
公開日2021-08-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献An alternative domain-swapped structure of the Pyrococcus horikoshii PolII mini-intein.
Sci Rep, 11, 2021
3ER9
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BU of 3er9 by Molmil
Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATP
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, 5'-R(UP*U)-3', CALCIUM ION, ...
著者Li, C, Li, H, Zhou, S, Poulos, T.L, Gershon, P.D.
登録日2008-10-01
公開日2009-06-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Polymerase Translocation with Respect to Single-Stranded Nucleic Acid: Looping or Wrapping of Primer around a Poly(A) Polymerase
Structure, 17, 2009

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